CsaV3_5G034370.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G034370.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 27343545 .. 27348281 (-)
Sequence length525
RNA-Seq ExpressionCsaV3_5G034370.1
SyntenyCsaV3_5G034370.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGACTTTAAGGAAACTTTGGCTTCCTTTAGGTACTCACAATTGGTTCTATATTTGAAAAAGCCTAGTTCTTTTTACATGTAATATAGTTATACAATAATGACATGAATTTATGTGGTATTTAAAATTGAATATTTTTCACCTGACAATAACAACGAGAAAAAGGATGAAAAGCAATATTGTTTCGTTTTTAGTTTTTATGGAAAGAAGAAATGAAAAGCGTAATTAAATGATGAATGTCCCCATAGTTTAAATATTAAAATAGTATAACACCGTTAATACAATAAGTTGCAACATAGAAAAGCGTGTATACACGTGACGACTTCCATCCCATTAATAATGATGCTCATCTGCCGACTAACCACATTAAACCTTCCACGTGTCACGATCCTATACCTCTTATGGGCATGGTAATTCACTACAACCCTCCATTCAATTCTTTATAATTTTAGATATTCACATCAACCACTTCTACCACTCTCAAACATTACTTCTTCTTTACCAAATTATTATCATTATTTTCACTACTCAGTTCCTACTCTACTTCACCCACCATCCTCAGTACGATTTTTAATCAAATTTTACAAAATTACTTAAATTTTGCTTATCTCTCATGTGGTATATATTTTTTTTTTATCATTGGTGATTATAATTTTTATCCCATTTAGTTGAACGTTTTGGTTAAATAATATATATACAATTGTTTTTTCTTACTAAGTTTTAATTGAAAAGGAAAAACAACAATAATAAAAGAAAACGAAAACAACATTTTCCTAATTTTTAAGAGTTTCACGTTTTAGTGACTAAAGAAAGTATACCATCTGTCCTAAGTGATTGATATAATTTTACATTAAAAATAATAATAACAAAACCCTTATTTTTGTCGCACATAAAATGGACCATTTAAAAAATAAAAACAAAAACTTGTAGATATTCATATGTAGATAATATAGATAAAATGAAACAGAATTAAAAATATGTATATATTTTAATATTGTCCTTTAGGTATTTAGATTTTAATAAAATTTGTTTTTTTTAATACATTAATTTATCTACGAAGTTGGTTAACATTTGCTTCTCTCCCTTATTCCCACTTTTTTTTTTCATCATCATATACAAAATTTTGCTATATATATACATTTATTTAAAAATAAGCCTTATCTTTATATTTACCAAATGATTATTTGAACGCATATGCTACCAAATGCATAACTAAGAATAGGAAATATAATTTGATTTTTGTTTTAAAAGTTCCATTTTAAAATTTTACCAAAATAGGCATACGTCTTTTAAACTTTAAACACTACTTTTTATTTTCTTTTGGTTAAAGCAAATGAGTGTTCTAAATTTAAAACATCACCACTGGCATTAAACAAAATTGTGCTTTGCAAATTCAAAAGTGCTTCAAATTCTGATATTTTTAAAAAATGGATAGATCTATGATAAACAAAATTAACAATGAAAGTTTATTAATATTAAAAAAGTGGAAATATCTGTCGCCTCCGCTGGGGTAGCGGTAGCATCACCGGCACCGCCAATGCTACAATTACAAATTGCTTAATAAATACGTAATTTAAAGTTTATATTAAAAAAAATTTGAAATATAAACCATAAACTCAAATACCGAAGCGAAGACTCGGCTTTGAGTTGGGAACCGTTGCTGCCCTTTTCCTTTTTTCCCTTCATTTCTTTATTTCTATTTTTTCCCTTTCTTCTTCTTCTTCTTCTTCTTCATCCACCTTATCTCTCTGCCATTTCTGTTCTTTATTTCTTCTTCTGCTATTCTGATTGCTTTGTCTCCCCCTTTGTAAACCCACCTTTTCTTTCCTTTTCACTCTTTTCTCTTTCTATCTATCTATCTATCTATCTATCTATCTCTCTACAACTCTTCCCCATCCACATCTCAACCTTTTCTTCTTTCATTTCTGTATATAATACATACCTCTTTACCTTTTTCAAGTCTTCATACCCAACTGCTGCCACTTTGTTTTGAGGTATTCTTCTTCTACTTCTTCTTCTTCCCTCCTTTTTTTTCATTTGAATTCCTCTGTTTCTCTTGTTTTTTTTATTGCTTCTCTGGCTTGGATCTGCCTATCTGATTCCTGTTAAATCTTATATGTTGTTTGTGGCTGTAGATGGTTTAATTGTAGTCTGAACTCTTTGGTGGGTGAACGGAGCGAACCCATGTTTCCAGTTTAAGTGTCTTTGGATTTTTAGGTCGGAACTGATTGATTCATGAATGGGTTTAACCGGTTTTTAGGGTTTTTTCTTTCTTTCAAAATTTCCATGTTTCCTCTGCTAGATCTATGTTTCTATTTCTTTATTTTTTTGGGGGGTTAAAAGTGGCGAGTCTTTGGATAACATCTGTTGGTGTTGTCTTAGTATTTAATAATGTTAAGTTAGTGAAAGAAAGGATCATTTCATGCCAACTAATGAGCTAACTTTTTGTCCGTTCTTTTTTAACTTTTAATTATTTATATTTAATTGTTTGAGGAAATTGCCGAACGGATTCCGATCTGCTTAGGGGACAAAATCAAACTTTGAATTTTCTTCTCCTTTCTTTCCGCTTTCATACGATTGTTTTGGTGCCATTTGTCGCGAGCATGATTTTATTTAATATGTTTTTGGTTTTCCCTCTTCTCTCTCTCAGCTTTTATTATTTGTCCCTTGAAATAACCCAACACCAAATATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCTTGTCCCCTTTCTGACTTCAGAGATCAACTTGTTTGCCCTAAACCACGTCGTCTCACCGTCAACGCCCACTCCGATACCTCCCTCCGGTGGAATCTAAGGTTCTTCATCGTTTACTTTCTTTATTTTATTACAACCCCTTTTGTTATCAAGTGCTAATTCTTCTTGAACTGATTTTTCAGTCACCAAGTTGAGCCAATCGACATGGCAGCTGGACCGGATCTCCTTGACTTCCTCCTGACGAAGGTACGACCTCCTCTGTTCTCCTTTGATTTTCTTCATCATCATTCAAATTTTGTAATGATTTATTGATGATCATGTGGTTGTTAATGAAACAGGGTGGTTGCAGCGTGGACCAATCGTTTACGCAGTTGGCTTCGTCGCCCCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCCAACCCTTTGATTCAGGATGCTCGATTTAGGGAAGAAAAATTCATCCCCTTTACTCCGATTGCTTCACCGTCCGGTCAGTTGTCGCCGTCTACATCCTCCAGGAAAGGAGGCCGCGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTTGATTGCCTTGATAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAAAATACAAAGATAAAAGTCATCTTCGTATTACAGTTTCAAGAAAAGTAAGATTCCCAATACAAATAGAAGAAAAAAAAAGATTCAAAAGAGTTGAGTCTCTCAAGAGAAGAAAGGTTACAATTACAATTTCCCTTCTTTTTGTGAATATGTTTGAAGTGTTCTTTGTAAATGTAAATAAAAAACTTGCCCATGTATACTAAAGCTGTGTATTTTAAGGCTTTTCCTTTCCCTTTTTTTTTCTTTTGAGGTGAGAAGAATGCGATGAGTGGATGTCAACCTCTTGTATTATATTTTTGTAATTAGAAGTCTTAAGGTTGAGGAAATTTTCATTAGAAAGTTCCAAGTGAGAAAGAGCCAATCTGTACATATTGCAAGAACTTGAACTCGAGTTTGTTGAAGTCATCAAGATGTGAATATTGTACAACCATATTTCCCGATTGTGATTTTGTTCATCTTTCTGGGTTTGTATTTGCTTTTGATCTAACAGCACCTGTTGAAATTCCTTGAATTTTGATACACACGCTTCAAACAACTTGATCAGCAAATATCAACTCTAGCGGCACTCTTAGATCCATACCTTCGATTCACTATTCCTTTTGCATATTTGCTTGGGCATAACGCTATGGATGGAAGAATTAGATTTTGCTTTTTTTTCAGGGCATCTTCACGGTACCGCCGACCTCTCAGCTTTTTTTAAAGCAACTTTGTTGGTGGAATAAACATCTCTCTCTTTCTTTGATGTTCAAAGCAACTTTGTTGCAGAGCTTGTCTCTTTATTGGAGTATTGATTTCTGAATTCTGACACAATTTTATTGATGCGAAGAAGATGCTTTGCTTTGTGACATTTAATAAACTCAATTAAGCTTAGTTACTTCATAGAAATTATTAAACAATAACTGATAACATTCAGCATCAAATGTCCCTTTCTGCTCACCAAGTTCGATGGAATCCATAAAGTAGAGATGGCGCTTGTTTCTAGGACTGCAAAAAGGCTTACTTCACACCAATTTTATAGAGGACCCATTCAAAATTCTATCTAACTTCTTACACAAATATGCATTATTTATATCACAAAAAGCGTAGCTTCTGGATGAGGGATAATTCTGCTTACATACGCAGGTCGGTTCAGATCATTGAGTTTACAGATAATTGGTATCAGCATGGTGTATTTTTCAACATGCTTCCATGTTTAAATTGATCCTGTGTAACGTACGTCTTTATTTTGTCATCTAACATATTGTGTTATTTATTAGAATGATTTGATCATTACTAACCTACTCTTTTGATGTTTAAATTTACCACGTGACACACATTTATAGTTGTCTAGTGTGTTGCCTTTTTCTACATGAT

mRNA sequence

ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCTTGTCCCCTTTCTGACTTCAGAGATCAACTTGTTTGCCCTAAACCACGTCGTCTCACCGTCAACGCCCACTCCGATACCTCCCTCCGGTGGAATCTAAGTCACCAAGTTGAGCCAATCGACATGGCAGCTGGACCGGATCTCCTTGACTTCCTCCTGACGAAGGGTGGTTGCAGCGTGGACCAATCGTTTACGCAGTTGGCTTCGTCGCCCCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCCAACCCTTTGATTCAGGATGCTCGATTTAGGGAAGAAAAATTCATCCCCTTTACTCCGATTGCTTCACCGTCCGGTCAGTTGTCGCCGTCTACATCCTCCAGGAAAGGAGGCCGCGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTTGATTGCCTTGATAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAA

Coding sequence (CDS)

ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCTTGTCCCCTTTCTGACTTCAGAGATCAACTTGTTTGCCCTAAACCACGTCGTCTCACCGTCAACGCCCACTCCGATACCTCCCTCCGGTGGAATCTAAGTCACCAAGTTGAGCCAATCGACATGGCAGCTGGACCGGATCTCCTTGACTTCCTCCTGACGAAGGGTGGTTGCAGCGTGGACCAATCGTTTACGCAGTTGGCTTCGTCGCCCCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCCAACCCTTTGATTCAGGATGCTCGATTTAGGGAAGAAAAATTCATCCCCTTTACTCCGATTGCTTCACCGTCCGGTCAGTTGTCGCCGTCTACATCCTCCAGGAAAGGAGGCCGCGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTTGATTGCCTTGATAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAA

Protein sequence

MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA*
Homology
[Close]
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match: XP_004135095.1 (uncharacterized protein LOC101219538 [Cucumis sativus] >KGN52086.1 hypothetical protein Csa_007855 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60
           MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60

Query: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120
           IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP
Sbjct: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120

Query: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match: XP_008446603.1 (PREDICTED: uncharacterized protein LOC103489287 [Cucumis melo] >KAA0034558.1 uncharacterized protein E6C27_scaffold65G005740 [Cucumis melo var. makuwa] >TYK09111.1 uncharacterized protein E5676_scaffold475G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 365.9 bits (938), Expect = 1.9e-97
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60
           MNHCAILSNAFSGHEEMRTSVPCP+SDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60

Query: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120
           IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP
Sbjct: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120

Query: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match: XP_038893407.1 (uncharacterized protein LOC120082204 [Benincasa hispida])

HSP 1 Score: 340.9 bits (873), Expect = 6.6e-90
Identity = 165/180 (91.67%), Postives = 168/180 (93.33%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLT------VNAHSDTSLRWNL 60
           MNHCAILSNAFSGHEEMRTS+PCP+SD RDQLVCPKPRRLT      VN H+DTSLRWNL
Sbjct: 1   MNHCAILSNAFSGHEEMRTSLPCPISDLRDQLVCPKPRRLTNHLNVAVNGHADTSLRWNL 60

Query: 61  SHQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFR 120
           SHQVE IDMAAGPDLLDFLLTKGG SVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF 
Sbjct: 61  SHQVEQIDMAAGPDLLDFLLTKGGRSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 EEKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           EEKFIPF PIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 EEKFIPFAPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 180

[Close]
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 8.3e-85
Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60
           MNHCAILSNAFS HEEMR  VP P+SD RDQLVCPKPRRL     TV  H+D+SLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120
           HQVE IDMA GPDLLDFLLT+GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           EKFIPF PIASPSGQLSPST+SRKGGRVRASFGNKPTVRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match: KAG6601286.1 (hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 8.3e-85
Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60
           MNHCAILSNAFS HEEMR  VP P+SD RDQLVCPKPRRL     TV  H+D+SLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120
           HQVE IDMA GPDLLDFLLT+GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           EKFIPF PIASPSGQLSPST+SRKGGRVRASFGNKPTVRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]
BLAST of CsaV3_5G034370.1 vs. ExPASy TrEMBL
Match: A0A0A0KWF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609720 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 5.4e-98
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60
           MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60

Query: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120
           IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP
Sbjct: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120

Query: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]
BLAST of CsaV3_5G034370.1 vs. ExPASy TrEMBL
Match: A0A5D3CB96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001020 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 9.2e-98
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60
           MNHCAILSNAFSGHEEMRTSVPCP+SDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60

Query: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120
           IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP
Sbjct: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120

Query: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]
BLAST of CsaV3_5G034370.1 vs. ExPASy TrEMBL
Match: A0A1S3BG95 (uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 9.2e-98
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60
           MNHCAILSNAFSGHEEMRTSVPCP+SDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60

Query: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120
           IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP
Sbjct: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120

Query: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA
Sbjct: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]
BLAST of CsaV3_5G034370.1 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.0e-85
Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60
           MNHCAILSNAFS HEEMR  VP P+SD RDQLVCPKPRRL     TV  H+D+SLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120
           HQVE IDMA GPDLLDFLLT+GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           EKFIPF PIASPSGQLSPST+SRKGGRVRASFGNKPTVRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]
BLAST of CsaV3_5G034370.1 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.6e-84
Identity = 155/179 (86.59%), Postives = 161/179 (89.94%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60
           MNHCAILSNAFS HEEMR  VP P+SD RDQLVCPKPRRL     TV  H+D+SLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120
           HQVE IDMA GPDLLDFLLT+GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 175
           EKFIP  PIASPSGQLSPST+SRKGGRVRASFGNKPTVRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPLAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]
BLAST of CsaV3_5G034370.1 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 164.5 bits (415), Expect = 7.8e-41
Identity = 91/184 (49.46%), Postives = 116/184 (63.04%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTV---NAHSDTSLRWNLSHQ 60
           MNH A+  NAF+   ++R+S    +   +  +VCPKPRR+ +   + H   SLR   SHQ
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQ 60

Query: 61  VEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSP-PFLCGSPPSRVANPLIQDARFREE 120
           +E  +  A  D+LD +LTK G   +Q   Q+  SP PFLCGSPPSRVANPL QDARFR+E
Sbjct: 61  LELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFRDE 120

Query: 121 KFIPFTPIASPSGQLSP-----STSSRKGG-RVRASFGNKPTVRIEGFDCLDRDRQNCSI 175
             +  + +  P   L P     S+S RKGG  VR +FGN P VR+EGFDCLDRD +NCSI
Sbjct: 121 -IVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDCLDRDSRNCSI 180

[Close]
BLAST of CsaV3_5G034370.1 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34
Identity = 86/181 (47.51%), Postives = 111/181 (61.33%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRL-TVNAHSDTSLRWNLSHQVE 60
           MN C I  NAF   EEMR +    +SD RD ++CPKPRR+  +N HS  SLRW L+HQ+E
Sbjct: 2   MNSCGIQQNAF---EEMRRN--AAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQME 61

Query: 61  PIDMAAGPDLLDFLLTK-GGCSVDQSFTQLASSPP-FLCGSPPSRVANPLIQDARFREEK 120
             +  +G ++LDF+LTK GG   +Q  T+   +PP F  GSPPSRV+NPL +D+ FREE 
Sbjct: 62  LCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREEL 121

Query: 121 FIPFTPIASP--SGQLSPSTSSRKGGRVRA--SFGNKPTVRIEGFDCLDRDRQNCSIPAF 175
            +  +P  S   + +  P +S R G  V A  SFGN P VR+ GFDC DR   N SI   
Sbjct: 122 LMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRSISTL 176

[Close]
BLAST of CsaV3_5G034370.1 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34
Identity = 86/181 (47.51%), Postives = 111/181 (61.33%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRL-TVNAHSDTSLRWNLSHQVE 60
           MN C I  NAF   EEMR +    +SD RD ++CPKPRR+  +N HS  SLRW L+HQ+E
Sbjct: 2   MNSCGIQQNAF---EEMRRN--AAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQME 61

Query: 61  PIDMAAGPDLLDFLLTK-GGCSVDQSFTQLASSPP-FLCGSPPSRVANPLIQDARFREEK 120
             +  +G ++LDF+LTK GG   +Q  T+   +PP F  GSPPSRV+NPL +D+ FREE 
Sbjct: 62  LCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREEL 121

Query: 121 FIPFTPIASP--SGQLSPSTSSRKGGRVRA--SFGNKPTVRIEGFDCLDRDRQNCSIPAF 175
            +  +P  S   + +  P +S R G  V A  SFGN P VR+ GFDC DR   N SI   
Sbjct: 122 LMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRSISTL 176

[Close]
BLAST of CsaV3_5G034370.1 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 9.3e-34
Identity = 87/175 (49.71%), Postives = 98/175 (56.00%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEP 60
           MNHC++  NAF   EE R  VP   S   D +VCPKPRR   N      L ++LS   + 
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPI-YSHPVDSVVCPKPRRAN-NVIRPFRLHFSLSGADDV 60

Query: 61  IDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIP 120
            D  AG DLLD    K   S        + SPPF  GSPPSR ANPL QDARF +EK   
Sbjct: 61  CDSKAGEDLLDIFRRKESVS--------SRSPPFFLGSPPSRAANPLAQDARFGDEKLNT 120

Query: 121 FTPIASPSGQLSPSTSSRKGGRVRASFGNKP-TVRIEGFDCLDRDRQNCSIPAFA 175
            +P  SP   L PS S  K G  R  FG KP TVR+EGFDCL+RDR N SIPA A
Sbjct: 121 VSPSLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162

[Close]
BLAST of CsaV3_5G034370.1 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32
Identity = 87/187 (46.52%), Postives = 111/187 (59.36%), Query Frame = 0 

Query: 1   MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHS-DTSLRWNLSHQVE 60
           MNHC +  NAF   EEM         D +D +VCPKPRR+ + A++    LR ++S    
Sbjct: 67  MNHCNLQQNAFMSREEMMG------FDRKDLVVCPKPRRVGLLANNVIRPLRLHMSQAAA 126

Query: 61  PI-DMAAGPDLLDFLLTK-GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEK 120
            + D  AG +LL+ +  K    ++ Q    L+SSPP+  GSPPSR ANPL QDARFR+EK
Sbjct: 127 DLCDSKAGAELLEIIRRKEDNGTIGQ---LLSSSPPYFPGSPPSRAANPLAQDARFRDEK 186

Query: 121 FIPFTPIA------SPSGQLSPSTSSRKG---GRVRASFG-NKPTVRIEGFDCLDRDRQN 175
             P +P +      S +G  SPS+SS      G VR  FG N P VR+EGFDCL+RDRQN
Sbjct: 187 LNPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQN 244

The following BLAST results are available for this feature:
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135095.11.1e-97100.00uncharacterized protein LOC101219538 [Cucumis sativus] >KGN52086.1 hypothetical ... [more]
XP_008446603.11.9e-9799.43PREDICTED: uncharacterized protein LOC103489287 [Cucumis melo] >KAA0034558.1 unc... [more]
XP_038893407.16.6e-9091.67uncharacterized protein LOC120082204 [Benincasa hispida][more]
XP_022957437.18.3e-8587.15uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothet... [more]
KAG6601286.18.3e-8587.15hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CsaV3_5G034370.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G034370.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWF75.4e-98100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609720 PE=4 SV=1[more]
A0A5D3CB969.2e-9899.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BG959.2e-9899.43uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=... [more]
A0A6J1GZ474.0e-8587.15uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC1114588... [more]
A0A6J1JI502.6e-8486.59uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540... [more]
BLAST of CsaV3_5G034370.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G68490.17.8e-4149.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G13390.13.2e-3447.51unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G13390.23.2e-3447.51unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G02555.19.3e-3449.71unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G16110.11.8e-3246.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..142
NoneNo IPR availablePANTHERPTHR33384:SF18BNAA07G24630D PROTEINcoord: 1..174
NoneNo IPR availablePANTHERPTHR33384EXPRESSED PROTEINcoord: 1..174

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_5G034370CsaV3_5G034370gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_5G034370.1.exon4CsaV3_5G034370.1.exon4exon
CsaV3_5G034370.1.exon3CsaV3_5G034370.1.exon3exon
CsaV3_5G034370.1.exon2CsaV3_5G034370.1.exon2exon
CsaV3_5G034370.1.exon1CsaV3_5G034370.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_5G034370.1.cds4CsaV3_5G034370.1.cds4CDS
CsaV3_5G034370.1.cds3CsaV3_5G034370.1.cds3CDS
CsaV3_5G034370.1.cds2CsaV3_5G034370.1.cds2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_5G034370.1CsaV3_5G034370.1-proteinpolypeptide