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CsaV3_5G034370 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAGACTTTAAGGAAACTTTGGCTTCCTTTAGGTACTCACAATTGGTTCTATATTTGAAAAAGCCTAGTTCTTTTTACATGTAATATAGTTATACAATAATGACATGAATTTATGTGGTATTTAAAATTGAATATTTTTCACCTGACAATAACAACGAGAAAAAGGATGAAAAGCAATATTGTTTCGTTTTTAGTTTTTATGGAAAGAAGAAATGAAAAGCGTAATTAAATGATGAATGTCCCCATAGTTTAAATATTAAAATAGTATAACACCGTTAATACAATAAGTTGCAACATAGAAAAGCGTGTATACACGTGACGACTTCCATCCCATTAATAATGATGCTCATCTGCCGACTAACCACATTAAACCTTCCACGTGTCACGATCCTATACCTCTTATGGGCATGGTAATTCACTACAACCCTCCATTCAATTCTTTATAATTTTAGATATTCACATCAACCACTTCTACCACTCTCAAACATTACTTCTTCTTTACCAAATTATTATCATTATTTTCACTACTCAGTTCCTACTCTACTTCACCCACCATCCTCAGTACGATTTTTAATCAAATTTTACAAAATTACTTAAATTTTGCTTATCTCTCATGTGGTATATATTTTTTTTTTATCATTGGTGATTATAATTTTTATCCCATTTAGTTGAACGTTTTGGTTAAATAATATATATACAATTGTTTTTTCTTACTAAGTTTTAATTGAAAAGGAAAAACAACAATAATAAAAGAAAACGAAAACAACATTTTCCTAATTTTTAAGAGTTTCACGTTTTAGTGACTAAAGAAAGTATACCATCTGTCCTAAGTGATTGATATAATTTTACATTAAAAATAATAATAACAAAACCCTTATTTTTGTCGCACATAAAATGGACCATTTAAAAAATAAAAACAAAAACTTGTAGATATTCATATGTAGATAATATAGATAAAATGAAACAGAATTAAAAATATGTATATATTTTAATATTGTCCTTTAGGTATTTAGATTTTAATAAAATTTGTTTTTTTTAATACATTAATTTATCTACGAAGTTGGTTAACATTTGCTTCTCTCCCTTATTCCCACTTTTTTTTTTCATCATCATATACAAAATTTTGCTATATATATACATTTATTTAAAAATAAGCCTTATCTTTATATTTACCAAATGATTATTTGAACGCATATGCTACCAAATGCATAACTAAGAATAGGAAATATAATTTGATTTTTGTTTTAAAAGTTCCATTTTAAAATTTTACCAAAATAGGCATACGTCTTTTAAACTTTAAACACTACTTTTTATTTTCTTTTGGTTAAAGCAAATGAGTGTTCTAAATTTAAAACATCACCACTGGCATTAAACAAAATTGTGCTTTGCAAATTCAAAAGTGCTTCAAATTCTGATATTTTTAAAAAATGGATAGATCTATGATAAACAAAATTAACAATGAAAGTTTATTAATATTAAAAAAGTGGAAATATCTGTCGCCTCCGCTGGGGTAGCGGTAGCATCACCGGCACCGCCAATGCTACAATTACAAATTGCTTAATAAATACGTAATTTAAAGTTTATATTAAAAAAAATTTGAAATATAAACCATAAACTCAAATACCGAAGCGAAGACTCGGCTTTGAGTTGGGAACCGTTGCTGCCCTTTTCCTTTTTTCCCTTCATTTCTTTATTTCTATTTTTTCCCTTTCTTCTTCTTCTTCTTCTTCTTCATCCACCTTATCTCTCTGCCATTTCTGTTCTTTATTTCTTCTTCTGCTATTCTGATTGCTTTGTCTCCCCCTTTGTAAACCCACCTTTTCTTTCCTTTTCACTCTTTTCTCTTTCTATCTATCTATCTATCTATCTATCTATCTCTCTACAACTCTTCCCCATCCACATCTCAACCTTTTCTTCTTTCATTTCTGTATATAATACATACCTCTTTACCTTTTTCAAGTCTTCATACCCAACTGCTGCCACTTTGTTTTGAGGTATTCTTCTTCTACTTCTTCTTCTTCCCTCCTTTTTTTTCATTTGAATTCCTCTGTTTCTCTTGTTTTTTTTATTGCTTCTCTGGCTTGGATCTGCCTATCTGATTCCTGTTAAATCTTATATGTTGTTTGTGGCTGTAGATGGTTTAATTGTAGTCTGAACTCTTTGGTGGGTGAACGGAGCGAACCCATGTTTCCAGTTTAAGTGTCTTTGGATTTTTAGGTCGGAACTGATTGATTCATGAATGGGTTTAACCGGTTTTTAGGGTTTTTTCTTTCTTTCAAAATTTCCATGTTTCCTCTGCTAGATCTATGTTTCTATTTCTTTATTTTTTTGGGGGGTTAAAAGTGGCGAGTCTTTGGATAACATCTGTTGGTGTTGTCTTAGTATTTAATAATGTTAAGTTAGTGAAAGAAAGGATCATTTCATGCCAACTAATGAGCTAACTTTTTGTCCGTTCTTTTTTAACTTTTAATTATTTATATTTAATTGTTTGAGGAAATTGCCGAACGGATTCCGATCTGCTTAGGGGACAAAATCAAACTTTGAATTTTCTTCTCCTTTCTTTCCGCTTTCATACGATTGTTTTGGTGCCATTTGTCGCGAGCATGATTTTATTTAATATGTTTTTGGTTTTCCCTCTTCTCTCTCTCAGCTTTTATTATTTGTCCCTTGAAATAACCCAACACCAAATATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCTTGTCCCCTTTCTGACTTCAGAGATCAACTTGTTTGCCCTAAACCACGTCGTCTCACCGTCAACGCCCACTCCGATACCTCCCTCCGGTGGAATCTAAGGTTCTTCATCGTTTACTTTCTTTATTTTATTACAACCCCTTTTGTTATCAAGTGCTAATTCTTCTTGAACTGATTTTTCAGTCACCAAGTTGAGCCAATCGACATGGCAGCTGGACCGGATCTCCTTGACTTCCTCCTGACGAAGGTACGACCTCCTCTGTTCTCCTTTGATTTTCTTCATCATCATTCAAATTTTGTAATGATTTATTGATGATCATGTGGTTGTTAATGAAACAGGGTGGTTGCAGCGTGGACCAATCGTTTACGCAGTTGGCTTCGTCGCCCCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCCAACCCTTTGATTCAGGATGCTCGATTTAGGGAAGAAAAATTCATCCCCTTTACTCCGATTGCTTCACCGTCCGGTCAGTTGTCGCCGTCTACATCCTCCAGGAAAGGAGGCCGCGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTTGATTGCCTTGATAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAAAATACAAAGATAAAAGTCATCTTCGTATTACAGTTTCAAGAAAAGTAAGATTCCCAATACAAATAGAAGAAAAAAAAAGATTCAAAAGAGTTGAGTCTCTCAAGAGAAGAAAGGTTACAATTACAATTTCCCTTCTTTTTGTGAATATGTTTGAAGTGTTCTTTGTAAATGTAAATAAAAAACTTGCCCATGTATACTAAAGCTGTGTATTTTAAGGCTTTTCCTTTCCCTTTTTTTTTCTTTTGAGGTGAGAAGAATGCGATGAGTGGATGTCAACCTCTTGTATTATATTTTTGTAATTAGAAGTCTTAAGGTTGAGGAAATTTTCATTAGAAAGTTCCAAGTGAGAAAGAGCCAATCTGTACATATTGCAAGAACTTGAACTCGAGTTTGTTGAAGTCATCAAGATGTGAATATTGTACAACCATATTTCCCGATTGTGATTTTGTTCATCTTTCTGGGTTTGTATTTGCTTTTGATCTAACAGCACCTGTTGAAATTCCTTGAATTTTGATACACACGCTTCAAACAACTTGATCAGCAAATATCAACTCTAGCGGCACTCTTAGATCCATACCTTCGATTCACTATTCCTTTTGCATATTTGCTTGGGCATAACGCTATGGATGGAAGAATTAGATTTTGCTTTTTTTTCAGGGCATCTTCACGGTACCGCCGACCTCTCAGCTTTTTTTAAAGCAACTTTGTTGGTGGAATAAACATCTCTCTCTTTCTTTGATGTTCAAAGCAACTTTGTTGCAGAGCTTGTCTCTTTATTGGAGTATTGATTTCTGAATTCTGACACAATTTTATTGATGCGAAGAAGATGCTTTGCTTTGTGACATTTAATAAACTCAATTAAGCTTAGTTACTTCATAGAAATTATTAAACAATAACTGATAACATTCAGCATCAAATGTCCCTTTCTGCTCACCAAGTTCGATGGAATCCATAAAGTAGAGATGGCGCTTGTTTCTAGGACTGCAAAAAGGCTTACTTCACACCAATTTTATAGAGGACCCATTCAAAATTCTATCTAACTTCTTACACAAATATGCATTATTTATATCACAAAAAGCGTAGCTTCTGGATGAGGGATAATTCTGCTTACATACGCAGGTCGGTTCAGATCATTGAGTTTACAGATAATTGGTATCAGCATGGTGTATTTTTCAACATGCTTCCATGTTTAAATTGATCCTGTGTAACGTACGTCTTTATTTTGTCATCTAACATATTGTGTTATTTATTAGAATGATTTGATCATTACTAACCTACTCTTTTGATGTTTAAATTTACCACGTGACACACATTTATAGTTGTCTAGTGTGTTGCCTTTTTCTACATGAT ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCTTGTCCCCTTTCTGACTTCAGAGATCAACTTGTTTGCCCTAAACCACGTCGTCTCACCGTCAACGCCCACTCCGATACCTCCCTCCGGTGGAATCTAAGTCACCAAGTTGAGCCAATCGACATGGCAGCTGGACCGGATCTCCTTGACTTCCTCCTGACGAAGGGTGGTTGCAGCGTGGACCAATCGTTTACGCAGTTGGCTTCGTCGCCCCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCCAACCCTTTGATTCAGGATGCTCGATTTAGGGAAGAAAAATTCATCCCCTTTACTCCGATTGCTTCACCGTCCGGTCAGTTGTCGCCGTCTACATCCTCCAGGAAAGGAGGCCGCGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTTGATTGCCTTGATAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAA ATGAATCACTGCGCCATTCTGTCAAACGCCTTCTCGGGCCACGAGGAGATGAGAACCTCTGTTCCTTGTCCCCTTTCTGACTTCAGAGATCAACTTGTTTGCCCTAAACCACGTCGTCTCACCGTCAACGCCCACTCCGATACCTCCCTCCGGTGGAATCTAAGTCACCAAGTTGAGCCAATCGACATGGCAGCTGGACCGGATCTCCTTGACTTCCTCCTGACGAAGGGTGGTTGCAGCGTGGACCAATCGTTTACGCAGTTGGCTTCGTCGCCCCCGTTTTTATGTGGGTCGCCGCCGAGCAGAGTAGCCAACCCTTTGATTCAGGATGCTCGATTTAGGGAAGAAAAATTCATCCCCTTTACTCCGATTGCTTCACCGTCCGGTCAGTTGTCGCCGTCTACATCCTCCAGGAAAGGAGGCCGCGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTTGATTGCCTTGATAGGGATAGGCAAAATTGCAGCATCCCTGCTTTCGCCTAA MNHCAILSNAFSGHEEMRTSVPCPLSDFRDQLVCPKPRRLTVNAHSDTSLRWNLSHQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFREEKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA* Homology
BLAST of CsaV3_5G034370 vs. NCBI nr
Match: XP_004135095.1 (uncharacterized protein LOC101219538 [Cucumis sativus] >KGN52086.1 hypothetical protein Csa_007855 [Cucumis sativus]) HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. NCBI nr
Match: XP_008446603.1 (PREDICTED: uncharacterized protein LOC103489287 [Cucumis melo] >KAA0034558.1 uncharacterized protein E6C27_scaffold65G005740 [Cucumis melo var. makuwa] >TYK09111.1 uncharacterized protein E5676_scaffold475G001020 [Cucumis melo var. makuwa]) HSP 1 Score: 365.9 bits (938), Expect = 1.9e-97 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. NCBI nr
Match: XP_038893407.1 (uncharacterized protein LOC120082204 [Benincasa hispida]) HSP 1 Score: 340.9 bits (873), Expect = 6.6e-90 Identity = 165/180 (91.67%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323.9 bits (829), Expect = 8.3e-85 Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. NCBI nr
Match: KAG6601286.1 (hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323.9 bits (829), Expect = 8.3e-85 Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. ExPASy TrEMBL
Match: A0A0A0KWF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609720 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 5.4e-98 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. ExPASy TrEMBL
Match: A0A5D3CB96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001020 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 9.2e-98 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. ExPASy TrEMBL
Match: A0A1S3BG95 (uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 9.2e-98 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.0e-85 Identity = 156/179 (87.15%), Postives = 162/179 (90.50%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.6e-84 Identity = 155/179 (86.59%), Postives = 161/179 (89.94%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 164.5 bits (415), Expect = 7.8e-41 Identity = 91/184 (49.46%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34 Identity = 86/181 (47.51%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 142.5 bits (358), Expect = 3.2e-34 Identity = 86/181 (47.51%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 141.0 bits (354), Expect = 9.3e-34 Identity = 87/175 (49.71%), Postives = 98/175 (56.00%), Query Frame = 0
BLAST of CsaV3_5G034370 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32 Identity = 87/187 (46.52%), Postives = 111/187 (59.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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