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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGGAAGGAGAAATGGGAAATCATGATCGGTGAGAAGGAATTTATAGGAATAGGAGGGAGAAAGAGGCAGCGGCGGTGGTGGTGACGGCGGTGGTTGTTCAGTTAGGTGTGTGGAAAGAAGAGATGAAAATGGGAATCGGGGAGTCGACGGTAGAGATAATAGAGAGTGGGCAACCGGATTAG mRNA sequence GAAGGAATTTATAGGAATAGGAGGGAGAAAGAGGCAGCGGCGGTGGTGGTGACGGCGGTGGTTGTTCAGTTAGGTGTGTGGAAAGAAGAGATGAAAATGGGAATCGGGGAGTCGACGGTAGAGATAATAGAGAGTGGGCAACCGGATTAG Coding sequence (CDS) GAAGGAATTTATAGGAATAGGAGGGAGAAAGAGGCAGCGGCGGTGGTGGTGACGGCGGTGGTTGTTCAGTTAGGTGTGTGGAAAGAAGAGATGAAAATGGGAATCGGGGAGTCGACGGTAGAGATAATAGAGAGTGGGCAACCGGATTAG Protein sequence EGIYRNRREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD*
Homology
BLAST of CsaV3_4G026700.1 vs. NCBI nr
Match: KAE8649574.1 (hypothetical protein Csa_023965, partial [Cucumis sativus]) HSP 1 Score: 97.4 bits (241), Expect = 3.6e-17 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 Query: 1 EGIYRNRREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD 50 EGIYRNRREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD Sbjct: 1 EGIYRNRREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD 49
BLAST of CsaV3_4G026700.1 vs. ExPASy TrEMBL
Match: A0A0A0L1G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314490 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 9.0e-14 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 Query: 6 NRREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD 50 +RREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD Sbjct: 10 DRREKEAAAVVVTAVVVQLGVWKEEMKMGIGESTVEIIESGQPD 53
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8649574.1 | 3.6e-17 | 100.00 | hypothetical protein Csa_023965, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L1G1 | 9.0e-14 | 97.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314490 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CsaV3_4G026700.1.exon1 | CsaV3_4G026700.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CsaV3_4G026700.1.cds1 | CsaV3_4G026700.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CsaV3_4G026700.1 | CsaV3_4G026700.1-protein | polypeptide |
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