CsaV3_1G003750.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G003750.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr1: 2337216 .. 2340976 (-)
Sequence length	600
RNA-Seq Expression	CsaV3_1G003750.1
Synteny	CsaV3_1G003750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGGTATAATTTCACTAGTTTTTCTGTTTTCTGTTTTCTGTTGTATTCAGATTAATTACTTAATTCCAGCAATCTAGTTGCTTAACTTGAAATGAGAATATATTAACCCATAACCCAAAATTGTAGATGTTGAATTTCAATCTCAAAGTTCTTATTTGTTTCTTGATCATAAACAGAACAGAATTATGATATTTAACATTAGCCAGGTGTTTCCTTTTGAAATTTTTTTCTAAAAAGGATAATTATTTTACGTTCGGTAGTCCTTTTGTAAATGAGTGCTTCACTAATTCATTCATCATTATAATAGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGATGTTGATGCTTACATATCAAAAACAGATTACACATCTTGGATACATTATCATCCTCCCAAGCAGTTAAAGAAGTGAAAAAGAAAACAAAGGATACTATGTGAATTTGTAATGGCATATTTTTCTAGGTATGTTATGACAACTTTATTCTATTGTATCTAGTTAAGATTTTGATCTTATGTCTTAGTTTTCTTATCAACATGTTGTTTTTTTCTTTTAGGTCTTTCTTCTGTAGACATAGATTGCTGTCCTTAGACTAACTGTTTTAGTGAGATTAGGGAATAAGGCATATCTAGCTGCTAAGTGGATCAAATTGGTCGGGTTCAAACGTTAAAATGCTAAAGAAACAACTATATTTTGTTAAGAGCGTATTTAACTAAAACAATCTAGTAGAAGTCTAATAAAGAAGAACATCACTGCTAGCTGCTGAAGCAACCCCATACATCATATGATAATTTATTTCAATAAAGTACTACTAGAAACAGAAAAGTGCTTATTGTTATCACTACTGTGAGCTGAATTCCTCCCTTTAATTTGAAACTAGCACTGATCTTGCCCAATCCTAAACCCACAATGCTAGGTTTTGGTGTTGGTTGAGTCATTGGAGAAGCTGAAATTTACAAAAGTAGAGTCAGATTGTTACATATTCGAAGGCTGTATTAGAAGTAGAACTGAACCAAAAACTATATCGTCTGGATGAATATCTGAAGTATACCTAGAACCGTAGCATTGCTAATTGTGGAGTTGATGTGTACTCTAGGAGGAACATGAGAACTGGGTGGACTAGGTGGCCCAAGGAGAGCTTCAAAGAACCGTTCAAAGAATTATAAATGTCAAACCGTGGGATCAGATTGTAGAGAGAAGTAGAGAGTAGAAAAAATATAACATCTTTTAGGATGACAGGATTATAGTTTTACCTGAACAAGTGGAGATGTTAACTTGAAGGCTGCAAATATCAGGCAGCTGGAGGGCTCTAGTAGTGTTGATAGGGAAAGAGCTTAAGTTAGTGCCATTCAGCAAGAGGCAAAGGCAGTTAGGGACAACGTTGTAGAGTTGTTTCAGGTTATCACAGCATCCCATAGGTGGTGTTGGTGTTACACCTTGCACAAAAGGTGCACAAGAAGCCAATGGAAGAATACTCGTCGTGCATTGAGCTATGGTGGGAGTTGATATGGTTGGACCTTGTGATATGGTGATCGGTAGAACGTGCAGGAGAAACAGCAGACTTAGGTATGAGATAGCTTGTTGAGGAAGGGGGAGATGTGGAAGAGATGCCATGGTTGCAAAGTCAATAAAGCTTTCTTTAGCTTTTACAGTGTAGAAATAGAGGGAAAGTTCATTGTTTAAGTGAGTTGAAACATGCTGTCTGTGTGCCATTCCACACACTTCTTGTTCTTCCCTCTCCAATACTTGTGAGTGCCAAAGCAAAACATGCTTGGAGTGAAAGACTCATGAGTTAAGGGCAAATAACTTCAACTTTCTAAGTTTTTGTTTTTGTTTTTTCTTGCCAAACTCTAAGCTCACTGTGAGATTCAACTTTTTCTTCATAATCGAATTAAGGCTATCAATACCACTTCTTTCAAGTGGTGGATCCTTGATTTTATGTCAAGTAAGACACAAGTTTATATGCCTGAAATTTAAAATGGGTCAATGGCATACTTAAATTAAGTAATAATAATTAAAAAAATCACAAAATATTTACACAAATGACAAAATATCGCTTAAGTCCAAAAATGATTTACACAAACAATTTTACTAGTGTGCAAAGGTTTTGCCAAAATTTTCATTTTTGTCAATTTCTCTTAAACTTCAAACATACTAAAGTCAATAATTTTGGGTTTATGTTTAATTTGGTTAAAAACTTAAAAATGAATTTAAAAATATGCTTAATAAAATTTTCAATAAAATTGAAAAATACTAAAGAGTAGGGGCAGAGTATTGTGTTTTGTGGACTCTACTTATTCTATATTTTCTTAACTTTATAAACCAATTAAACTCAAATGGAAAGTTATTGAATCTGATATATGAGTAAATTACAATTTCAATTTAACCATCGGTTTAAAAAATAACAATGTTTGACACCTTACTCGAAAACAATTTTAAGAACAGGGAGATAAACTAAAGAGATAAATTCAAAAAACACAAGGTTTAGTAATTCAATTTGATAATATGTTATTTACGTTTGGGAGACAATGTGTGCAAGAAAAATACTTTTACTAATATGAAATTAAGCAATTAGAACGATGTAATAGCTCTGCTCCATGAATAATCACTGTGATTATATTATTAAGCTAAATATGAGAGTTACTCAGAACTATAATCTTTCCATCTCACAGCGAAATTGAAATACAACAAACAACATTCGGACACCACCACCACAGAAGTTGAGAAACTTCAATCAAAATACTCAAAATCAGAAGCAGTAGCAAGTAGGCAAGACAAGAACTTATTCATTATTCAAAATCTGGAGCATAAATAAGCAAAATATTCAGAGGATCACAACTAGCAAGAGGATTGTTACAACAATATACTCAAAGGAGCTTAAAACAAAGATAGTGAATACCAAAACTGTAGCAATTGAAAGAAAGAAAGAAAAAAAGAAACGTAGATTTTGGAGGTATATGATTGAGATATTAGAATTGAGATTGAATGGCCCAACGTTGGAGTTGATATTGCTATCAAATGGTAGCCACGTGACCCACATGCTCCCAAAATGGCATAAAATGAAGTAGTGGCTCAAAAGCTTCTTTCTCTTAATCCCACAACACCAACTATTCCTTTCCACTTCATAATAGCATTTGTTTGGGGTAAAAACTATTTTAATCTTGATAAAAGAAAAGTAAACAATGCATTTTTTTT

mRNA sequence

ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA

Coding sequence (CDS)

ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA

Protein sequence

MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE*

Homology

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BLAST of CsaV3_1G003750.1 vs. NCBI nr
Match: XP_004138240.1 (uncharacterized protein LOC101218989 [Cucumis sativus] >KGN63813.1 hypothetical protein Csa_013143 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 2.6e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT
Sbjct: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60

Query: 61  GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW
Sbjct: 61  GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180
           EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE
Sbjct: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180

Query: 181 ASNPDVFESNPTEVAPSLE 200
           ASNPDVFESNPTEVAPSLE
Sbjct: 181 ASNPDVFESNPTEVAPSLE 199

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BLAST of CsaV3_1G003750.1 vs. NCBI nr
Match: XP_008453388.1 (PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo] >KAA0041427.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa] >KAA0058066.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa] >TYK28412.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa])

HSP 1 Score: 375.9 bits (964), Expect = 2.1e-100
Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFR 60
           MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFR
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEARTLHVVQAKKSSFR 60

Query: 61  TGRFDSKNRKSSTTIKEQ--EEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQP 120
           TGRFDSKNR+SSTTIKEQ  EEEEERNRTAG+EMGSP+VENAGVVFDVDENLP+LPGLQP
Sbjct: 61  TGRFDSKNRRSSTTIKEQDKEEEEERNRTAGIEMGSPIVENAGVVFDVDENLPELPGLQP 120

Query: 121 DFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180
           DFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREIL
Sbjct: 121 DFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of CsaV3_1G003750.1 vs. NCBI nr
Match: XP_038876354.1 (uncharacterized protein LOC120068690 [Benincasa hispida])

HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87
Identity = 173/200 (86.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGAT GT GGILYR+ TRTPSN FL RRNALF PSKEARTL++VQAKKSSFRT
Sbjct: 1   MALTITNGGATGGTGGGILYRSSTRTPSNQFLLRRNALFPPSKEARTLYVVQAKKSSFRT 60

Query: 61  GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GRFD KNR+SSTT +EQ EEEERNRTA +   SP VENAGV FDVDENLP+LPGLQPDFW
Sbjct: 61  GRFDGKNRRSSTTTQEQ-EEEERNRTAEILRDSPNVENAGVAFDVDENLPELPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EP 180
           EGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFK+TPAYKESVQTREIL EP
Sbjct: 121 EGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKDTPAYKESVQTREILEEP 180

Query: 181 EASNPDVFESNPTEVAPSLE 200
           EASNPDVFESNPTEVAPSLE
Sbjct: 181 EASNPDVFESNPTEVAPSLE 199

[Close]

BLAST of CsaV3_1G003750.1 vs. NCBI nr
Match: XP_022134616.1 (uncharacterized protein LOC111006843 [Momordica charantia])

HSP 1 Score: 324.3 bits (830), Expect = 7.3e-85
Identity = 167/201 (83.08%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRT
Sbjct: 1   MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRT 60

Query: 61  GRFDSKNRKSSTTIKEQ-EEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDF 120
           GRFDSKNR+SSTT KEQ EEEEERNR A +E   P VENAGV FDVDENLP+LPGLQPDF
Sbjct: 61  GRFDSKNRRSSTTTKEQEEEEEERNRMAEIERDGPNVENAGVAFDVDENLPELPGLQPDF 120

Query: 121 WEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-E 180
           WEGP+WD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+L E
Sbjct: 121 WEGPRWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEE 180

Query: 181 PEASNPDVFESNPTEVAPSLE 200
           PEASNPDVFESNPTEVAPSLE
Sbjct: 181 PEASNPDVFESNPTEVAPSLE 201

[Close]

BLAST of CsaV3_1G003750.1 vs. NCBI nr
Match: XP_022987248.1 (uncharacterized protein LOC111484859 [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 166/202 (82.18%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR 
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60

Query: 61  GRFDSKNRKSSTTIKEQE--EEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPD 120
           GR DSKNR+SST+ KEQE  EEEERNR A       + ENAGV FDVDENLP+LPGLQPD
Sbjct: 61  GRIDSKNRRSSTSTKEQEEQEEEERNRMA------EIAENAGVAFDVDENLPELPGLQPD 120

Query: 121 FWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL- 180
           FWEG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL 
Sbjct: 121 FWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILE 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of CsaV3_1G003750.1 vs. ExPASy TrEMBL
Match: A0A0A0LPS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022520 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT
Sbjct: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60

Query: 61  GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW
Sbjct: 61  GRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180
           EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE
Sbjct: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180

Query: 181 ASNPDVFESNPTEVAPSLE 200
           ASNPDVFESNPTEVAPSLE
Sbjct: 181 ASNPDVFESNPTEVAPSLE 199

[Close]

BLAST of CsaV3_1G003750.1 vs. ExPASy TrEMBL
Match: A0A5A7UV79 (Putative AT-rich interactive domain-containing protein 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00400 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100
Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFR 60
           MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFR
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEARTLHVVQAKKSSFR 60

Query: 61  TGRFDSKNRKSSTTIKEQ--EEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQP 120
           TGRFDSKNR+SSTTIKEQ  EEEEERNRTAG+EMGSP+VENAGVVFDVDENLP+LPGLQP
Sbjct: 61  TGRFDSKNRRSSTTIKEQDKEEEEERNRTAGIEMGSPIVENAGVVFDVDENLPELPGLQP 120

Query: 121 DFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180
           DFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREIL
Sbjct: 121 DFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of CsaV3_1G003750.1 vs. ExPASy TrEMBL
Match: A0A1S3BW57 (uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100
Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFR 60
           MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFR
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEARTLHVVQAKKSSFR 60

Query: 61  TGRFDSKNRKSSTTIKEQ--EEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQP 120
           TGRFDSKNR+SSTTIKEQ  EEEEERNRTAG+EMGSP+VENAGVVFDVDENLP+LPGLQP
Sbjct: 61  TGRFDSKNRRSSTTIKEQDKEEEEERNRTAGIEMGSPIVENAGVVFDVDENLPELPGLQP 120

Query: 121 DFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180
           DFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREIL
Sbjct: 121 DFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of CsaV3_1G003750.1 vs. ExPASy TrEMBL
Match: A0A6J1BYA9 (uncharacterized protein LOC111006843 OS=Momordica charantia OX=3673 GN=LOC111006843 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85
Identity = 167/201 (83.08%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRT
Sbjct: 1   MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRT 60

Query: 61  GRFDSKNRKSSTTIKEQ-EEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDF 120
           GRFDSKNR+SSTT KEQ EEEEERNR A +E   P VENAGV FDVDENLP+LPGLQPDF
Sbjct: 61  GRFDSKNRRSSTTTKEQEEEEEERNRMAEIERDGPNVENAGVAFDVDENLPELPGLQPDF 120

Query: 121 WEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-E 180
           WEGP+WD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+L E
Sbjct: 121 WEGPRWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEE 180

Query: 181 PEASNPDVFESNPTEVAPSLE 200
           PEASNPDVFESNPTEVAPSLE
Sbjct: 181 PEASNPDVFESNPTEVAPSLE 201

[Close]

BLAST of CsaV3_1G003750.1 vs. ExPASy TrEMBL
Match: A0A6J1JIX0 (uncharacterized protein LOC111484859 OS=Cucurbita maxima OX=3661 GN=LOC111484859 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.6e-83
Identity = 166/202 (82.18%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR 
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60

Query: 61  GRFDSKNRKSSTTIKEQE--EEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPD 120
           GR DSKNR+SST+ KEQE  EEEERNR A       + ENAGV FDVDENLP+LPGLQPD
Sbjct: 61  GRIDSKNRRSSTSTKEQEEQEEEERNRMA------EIAENAGVAFDVDENLPELPGLQPD 120

Query: 121 FWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL- 180
           FWEG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL 
Sbjct: 121 FWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILE 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 196

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BLAST of CsaV3_1G003750.1 vs. TAIR 10
Match: AT1G73885.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 60/92 (65.22%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 109 LPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYK 168
           +  LPGL+PD +EG +WD  GFF++YLWAFGI+FA+I+ G+A  TYNEGATDFKETP YK
Sbjct: 88  IKDLPGLEPDPFEGEKWDGLGFFVQYLWAFGILFALISGGLAAGTYNEGATDFKETPVYK 147

Query: 169 ESVQTREIL-EPEASN-PDVFESNPTEVAPSL 199
           E++Q+R++L E E+SN  DVFESNPTEVAP++
Sbjct: 148 EAIQSRDLLDEAESSNSEDVFESNPTEVAPTI 179

The following BLAST results are available for this feature:

BLAST of CsaV3_1G003750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138240.1	2.6e-106	100.00	uncharacterized protein LOC101218989 [Cucumis sativus] >KGN63813.1 hypothetical ...	[more]
XP_008453388.1	2.1e-100	94.06	PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo] >KAA0041427.1 put...	[more]
XP_038876354.1	2.0e-87	86.50	uncharacterized protein LOC120068690 [Benincasa hispida]	[more]
XP_022134616.1	7.3e-85	83.08	uncharacterized protein LOC111006843 [Momordica charantia]	[more]
XP_022987248.1	2.0e-82	82.18	uncharacterized protein LOC111484859 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G003750.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G003750.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPS1	1.2e-106	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022520 PE=4 SV=1	[more]
A0A5A7UV79	1.0e-100	94.06	Putative AT-rich interactive domain-containing protein 5A OS=Cucumis melo var. m...	[more]
A0A1S3BW57	1.0e-100	94.06	uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=...	[more]
A0A6J1BYA9	3.5e-85	83.08	uncharacterized protein LOC111006843 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JIX0	9.6e-83	82.18	uncharacterized protein LOC111484859 OS=Cucurbita maxima OX=3661 GN=LOC111484859...	[more]

BLAST of CsaV3_1G003750.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73885.1	3.5e-29	65.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..199
None	No IPR available	PANTHER	PTHR36004	AT-RICH INTERACTIVE DOMAIN PROTEIN	coord: 1..199

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_1G003750	CsaV3_1G003750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G003750.1.exon3	CsaV3_1G003750.1.exon3	exon
CsaV3_1G003750.1.exon2	CsaV3_1G003750.1.exon2	exon
CsaV3_1G003750.1.exon1	CsaV3_1G003750.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G003750.1.cds2	CsaV3_1G003750.1.cds2	CDS
CsaV3_1G003750.1.cds1	CsaV3_1G003750.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G003750.1	CsaV3_1G003750.1-protein	polypeptide