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CsaV3_1G003750 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGGTATAATTTCACTAGTTTTTCTGTTTTCTGTTTTCTGTTGTATTCAGATTAATTACTTAATTCCAGCAATCTAGTTGCTTAACTTGAAATGAGAATATATTAACCCATAACCCAAAATTGTAGATGTTGAATTTCAATCTCAAAGTTCTTATTTGTTTCTTGATCATAAACAGAACAGAATTATGATATTTAACATTAGCCAGGTGTTTCCTTTTGAAATTTTTTTCTAAAAAGGATAATTATTTTACGTTCGGTAGTCCTTTTGTAAATGAGTGCTTCACTAATTCATTCATCATTATAATAGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGATGTTGATGCTTACATATCAAAAACAGATTACACATCTTGGATACATTATCATCCTCCCAAGCAGTTAAAGAAGTGAAAAAGAAAACAAAGGATACTATGTGAATTTGTAATGGCATATTTTTCTAGGTATGTTATGACAACTTTATTCTATTGTATCTAGTTAAGATTTTGATCTTATGTCTTAGTTTTCTTATCAACATGTTGTTTTTTTCTTTTAGGTCTTTCTTCTGTAGACATAGATTGCTGTCCTTAGACTAACTGTTTTAGTGAGATTAGGGAATAAGGCATATCTAGCTGCTAAGTGGATCAAATTGGTCGGGTTCAAACGTTAAAATGCTAAAGAAACAACTATATTTTGTTAAGAGCGTATTTAACTAAAACAATCTAGTAGAAGTCTAATAAAGAAGAACATCACTGCTAGCTGCTGAAGCAACCCCATACATCATATGATAATTTATTTCAATAAAGTACTACTAGAAACAGAAAAGTGCTTATTGTTATCACTACTGTGAGCTGAATTCCTCCCTTTAATTTGAAACTAGCACTGATCTTGCCCAATCCTAAACCCACAATGCTAGGTTTTGGTGTTGGTTGAGTCATTGGAGAAGCTGAAATTTACAAAAGTAGAGTCAGATTGTTACATATTCGAAGGCTGTATTAGAAGTAGAACTGAACCAAAAACTATATCGTCTGGATGAATATCTGAAGTATACCTAGAACCGTAGCATTGCTAATTGTGGAGTTGATGTGTACTCTAGGAGGAACATGAGAACTGGGTGGACTAGGTGGCCCAAGGAGAGCTTCAAAGAACCGTTCAAAGAATTATAAATGTCAAACCGTGGGATCAGATTGTAGAGAGAAGTAGAGAGTAGAAAAAATATAACATCTTTTAGGATGACAGGATTATAGTTTTACCTGAACAAGTGGAGATGTTAACTTGAAGGCTGCAAATATCAGGCAGCTGGAGGGCTCTAGTAGTGTTGATAGGGAAAGAGCTTAAGTTAGTGCCATTCAGCAAGAGGCAAAGGCAGTTAGGGACAACGTTGTAGAGTTGTTTCAGGTTATCACAGCATCCCATAGGTGGTGTTGGTGTTACACCTTGCACAAAAGGTGCACAAGAAGCCAATGGAAGAATACTCGTCGTGCATTGAGCTATGGTGGGAGTTGATATGGTTGGACCTTGTGATATGGTGATCGGTAGAACGTGCAGGAGAAACAGCAGACTTAGGTATGAGATAGCTTGTTGAGGAAGGGGGAGATGTGGAAGAGATGCCATGGTTGCAAAGTCAATAAAGCTTTCTTTAGCTTTTACAGTGTAGAAATAGAGGGAAAGTTCATTGTTTAAGTGAGTTGAAACATGCTGTCTGTGTGCCATTCCACACACTTCTTGTTCTTCCCTCTCCAATACTTGTGAGTGCCAAAGCAAAACATGCTTGGAGTGAAAGACTCATGAGTTAAGGGCAAATAACTTCAACTTTCTAAGTTTTTGTTTTTGTTTTTTCTTGCCAAACTCTAAGCTCACTGTGAGATTCAACTTTTTCTTCATAATCGAATTAAGGCTATCAATACCACTTCTTTCAAGTGGTGGATCCTTGATTTTATGTCAAGTAAGACACAAGTTTATATGCCTGAAATTTAAAATGGGTCAATGGCATACTTAAATTAAGTAATAATAATTAAAAAAATCACAAAATATTTACACAAATGACAAAATATCGCTTAAGTCCAAAAATGATTTACACAAACAATTTTACTAGTGTGCAAAGGTTTTGCCAAAATTTTCATTTTTGTCAATTTCTCTTAAACTTCAAACATACTAAAGTCAATAATTTTGGGTTTATGTTTAATTTGGTTAAAAACTTAAAAATGAATTTAAAAATATGCTTAATAAAATTTTCAATAAAATTGAAAAATACTAAAGAGTAGGGGCAGAGTATTGTGTTTTGTGGACTCTACTTATTCTATATTTTCTTAACTTTATAAACCAATTAAACTCAAATGGAAAGTTATTGAATCTGATATATGAGTAAATTACAATTTCAATTTAACCATCGGTTTAAAAAATAACAATGTTTGACACCTTACTCGAAAACAATTTTAAGAACAGGGAGATAAACTAAAGAGATAAATTCAAAAAACACAAGGTTTAGTAATTCAATTTGATAATATGTTATTTACGTTTGGGAGACAATGTGTGCAAGAAAAATACTTTTACTAATATGAAATTAAGCAATTAGAACGATGTAATAGCTCTGCTCCATGAATAATCACTGTGATTATATTATTAAGCTAAATATGAGAGTTACTCAGAACTATAATCTTTCCATCTCACAGCGAAATTGAAATACAACAAACAACATTCGGACACCACCACCACAGAAGTTGAGAAACTTCAATCAAAATACTCAAAATCAGAAGCAGTAGCAAGTAGGCAAGACAAGAACTTATTCATTATTCAAAATCTGGAGCATAAATAAGCAAAATATTCAGAGGATCACAACTAGCAAGAGGATTGTTACAACAATATACTCAAAGGAGCTTAAAACAAAGATAGTGAATACCAAAACTGTAGCAATTGAAAGAAAGAAAGAAAAAAAGAAACGTAGATTTTGGAGGTATATGATTGAGATATTAGAATTGAGATTGAATGGCCCAACGTTGGAGTTGATATTGCTATCAAATGGTAGCCACGTGACCCACATGCTCCCAAAATGGCATAAAATGAAGTAGTGGCTCAAAAGCTTCTTTCTCTTAATCCCACAACACCAACTATTCCTTTCCACTTCATAATAGCATTTGTTTGGGGTAAAAACTATTTTAATCTTGATAAAAGAAAAGTAAACAATGCATTTTTTTT ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE* Homology
BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_004138240.1 (uncharacterized protein LOC101218989 [Cucumis sativus] >KGN63813.1 hypothetical protein Csa_013143 [Cucumis sativus]) HSP 1 Score: 395.6 bits (1015), Expect = 2.6e-106 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_008453388.1 (PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo] >KAA0041427.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa] >KAA0058066.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa] >TYK28412.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa]) HSP 1 Score: 375.9 bits (964), Expect = 2.1e-100 Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_038876354.1 (uncharacterized protein LOC120068690 [Benincasa hispida]) HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87 Identity = 173/200 (86.50%), Postives = 182/200 (91.00%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_022134616.1 (uncharacterized protein LOC111006843 [Momordica charantia]) HSP 1 Score: 324.3 bits (830), Expect = 7.3e-85 Identity = 167/201 (83.08%), Postives = 178/201 (88.56%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_022987248.1 (uncharacterized protein LOC111484859 [Cucurbita maxima]) HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82 Identity = 166/202 (82.18%), Postives = 175/202 (86.63%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. ExPASy TrEMBL
Match: A0A0A0LPS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022520 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. ExPASy TrEMBL
Match: A0A5A7UV79 (Putative AT-rich interactive domain-containing protein 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00400 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100 Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. ExPASy TrEMBL
Match: A0A1S3BW57 (uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100 Identity = 190/202 (94.06%), Postives = 197/202 (97.52%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. ExPASy TrEMBL
Match: A0A6J1BYA9 (uncharacterized protein LOC111006843 OS=Momordica charantia OX=3673 GN=LOC111006843 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85 Identity = 167/201 (83.08%), Postives = 178/201 (88.56%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. ExPASy TrEMBL
Match: A0A6J1JIX0 (uncharacterized protein LOC111484859 OS=Cucurbita maxima OX=3661 GN=LOC111484859 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.6e-83 Identity = 166/202 (82.18%), Postives = 175/202 (86.63%), Query Frame = 0
BLAST of CsaV3_1G003750 vs. TAIR 10
Match: AT1G73885.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29 Identity = 60/92 (65.22%), Postives = 78/92 (84.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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