CsGy4G009920.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAATCTTGGGTTCACAAGTCTTCCCCTTTTGGTGGTGGCAATGGCGGCCCTTCTCACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCGCCACCGTCCACCACTTGTTGCAGTAAGCTGAGGGAGCAACAGCCATGCTTTTGTCAGTATATGAAGAATCCAAGCTTGGGAGGTTACGTGAAATCTGCTCGAGCAAAAGCTATTATTTCCTCCTGTGGTGTTCCCTATCCCAAATGCTAG ATGAAAAATCTTGGGTTCACAAGTCTTCCCCTTTTGGTGGTGGCAATGGCGGCCCTTCTCACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCGCCACCGTCCACCACTTGTTGCAGTAAGCTGAGGGAGCAACAGCCATGCTTTTGTCAGTATATGAAGAATCCAAGCTTGGGAGGTTACGTGAAATCTGCTCGAGCAAAAGCTATTATTTCCTCCTGTGGTGTTCCCTATCCCAAATGCTAG ATGAAAAATCTTGGGTTCACAAGTCTTCCCCTTTTGGTGGTGGCAATGGCGGCCCTTCTCACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCGCCACCGTCCACCACTTGTTGCAGTAAGCTGAGGGAGCAACAGCCATGCTTTTGTCAGTATATGAAGAATCCAAGCTTGGGAGGTTACGTGAAATCTGCTCGAGCAAAAGCTATTATTTCCTCCTGTGGTGTTCCCTATCCCAAATGCTAG MKNLGFTSLPLLVVAMAALLTGARVADAITCNTMGLSPCIGAMTSTAPPSTTCCSKLREQQPCFCQYMKNPSLGGYVKSARAKAIISSCGVPYPKC* Homology
BLAST of CsGy4G009920.2 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 7.8e-19 Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-18 Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.0e-14 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 5.8e-14 Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 2.2e-13 Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. NCBI nr
Match: KGN53818.1 (hypothetical protein Csa_014950 [Cucumis sativus]) HSP 1 Score: 194 bits (492), Expect = 3.09e-62 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. NCBI nr
Match: XP_008444080.1 (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo] >KAA0064174.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 171 bits (432), Expect = 4.41e-53 Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 155 bits (392), Expect = 5.57e-47 Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. NCBI nr
Match: TYK02855.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 125 bits (314), Expect = 1.69e-35 Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 114 bits (284), Expect = 1.60e-30 Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy TrEMBL
Match: A0A0A0KW85 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G146250 PE=4 SV=1) HSP 1 Score: 194 bits (492), Expect = 1.50e-62 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy TrEMBL
Match: A0A0A0L100 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141240 PE=4 SV=1) HSP 1 Score: 193 bits (490), Expect = 3.02e-62 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy TrEMBL
Match: A0A5A7VAB3 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001020 PE=4 SV=1) HSP 1 Score: 171 bits (432), Expect = 2.14e-53 Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy TrEMBL
Match: A0A1S3B931 (non-specific lipid-transfer protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487520 PE=4 SV=1) HSP 1 Score: 171 bits (432), Expect = 2.14e-53 Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. ExPASy TrEMBL
Match: A0A5D3BUT3 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00580 PE=4 SV=1) HSP 1 Score: 125 bits (314), Expect = 8.17e-36 Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 1.9e-20 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 8.8e-18 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of CsGy4G009920.2 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 7.7e-14 Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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