CsGy3G032460.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCCAAGGAAGAGATGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAACTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCGTTTCCTCTCAAGTTGCTACATCTTTGGAAGCTAAGGTCAAGCTAACTTTTTTGTTTTCTCATCGACAAAGATCGATAAGTTTGAATAACACTAACAGTGATATTTTAAGTGAGAATGTAATGGAATAAGAGAAAAATAATAATGTGTAACACATATATATTTCAGGAACATGAGAAGAGAAAAGCAGCGGAAGACGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAAACATTGAAGACAACGTTCATCGTCTCCGGCATCATCGCTGCCGTAGCGGTGGCAGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAA ATGGGAAGCCAAGGAAGAGATGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAACTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCGTTTCCTCTCAAGTTGCTACATCTTTGGAAGCTAAGGAACATGAGAAGAGAAAAGCAGCGGAAGACGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAAACATTGAAGACAACGTTCATCGTCTCCGGCATCATCGCTGCCGTAGCGGTGGCAGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAA ATGGGAAGCCAAGGAAGAGATGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAACTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCGTTTCCTCTCAAGTTGCTACATCTTTGGAAGCTAAGGAACATGAGAAGAGAAAAGCAGCGGAAGACGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAAACATTGAAGACAACGTTCATCGTCTCCGGCATCATCGCTGCCGTAGCGGTGGCAGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAA MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPVSSQVATSLEAKEHEKRKAAEDERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN* Homology
BLAST of CsGy3G032460.2 vs. NCBI nr
Match: XP_011652018.1 (uncharacterized protein LOC105434975 [Cucumis sativus] >KGN59143.1 hypothetical protein Csa_001723 [Cucumis sativus]) HSP 1 Score: 178 bits (452), Expect = 3.92e-56 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. NCBI nr
Match: XP_008442853.1 (PREDICTED: uncharacterized protein LOC103486621 [Cucumis melo]) HSP 1 Score: 174 bits (441), Expect = 1.87e-54 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. NCBI nr
Match: XP_022144747.1 (uncharacterized protein LOC111014362 [Momordica charantia]) HSP 1 Score: 125 bits (314), Expect = 5.16e-35 Identity = 69/89 (77.53%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. NCBI nr
Match: XP_023005785.1 (uncharacterized protein LOC111498680 [Cucurbita maxima]) HSP 1 Score: 120 bits (302), Expect = 3.58e-33 Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. NCBI nr
Match: XP_022947065.1 (uncharacterized protein LOC111451047 [Cucurbita moschata]) HSP 1 Score: 120 bits (301), Expect = 5.08e-33 Identity = 66/103 (64.08%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. ExPASy TrEMBL
Match: A0A0A0LBF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777020 PE=4 SV=1) HSP 1 Score: 178 bits (452), Expect = 1.90e-56 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. ExPASy TrEMBL
Match: A0A1S3B6R1 (uncharacterized protein LOC103486621 OS=Cucumis melo OX=3656 GN=LOC103486621 PE=4 SV=1) HSP 1 Score: 174 bits (441), Expect = 9.05e-55 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. ExPASy TrEMBL
Match: A0A6J1CUK2 (uncharacterized protein LOC111014362 OS=Momordica charantia OX=3673 GN=LOC111014362 PE=4 SV=1) HSP 1 Score: 125 bits (314), Expect = 2.50e-35 Identity = 69/89 (77.53%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. ExPASy TrEMBL
Match: A0A6J1KYC8 (uncharacterized protein LOC111498680 OS=Cucurbita maxima OX=3661 GN=LOC111498680 PE=4 SV=1) HSP 1 Score: 120 bits (302), Expect = 1.73e-33 Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. ExPASy TrEMBL
Match: A0A6J1G5S8 (uncharacterized protein LOC111451047 OS=Cucurbita moschata OX=3662 GN=LOC111451047 PE=4 SV=1) HSP 1 Score: 120 bits (301), Expect = 2.46e-33 Identity = 66/103 (64.08%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of CsGy3G032460.2 vs. TAIR 10
Match: AT3G52620.1 (unknown protein; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|