CsGy3G026490.2 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G026490.2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	40S ribosomal protein SA
Location	Gy14Chr3: 27325603 .. 27328064 (+)
Sequence length	1333
RNA-Seq Expression	CsGy3G026490.2
Synteny	CsGy3G026490.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAGGAAAAGAAGAAAACCCTAGTTGCTTCTCATCTCCCACCCTCGCCAGCCGTTCTCTTCTCCTTCAAATAACTTCATATTCCGCTATTTTCCAAACCCTAACGAAGTTCCAGCCATGGCGACTGCAACAGCTCCACGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCGGCTGAGGTTCATCTTGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGCAACGATGGTACTTTCTTAATACTCCTTTTAACTTTTAGATCTTCACATTTGATTTTCATTCTGCTCTCCACGTTTTCAACCTTTGCGGTGTTTTTTCATGCACTGGAACTTTCAGTACTAATGTGCACTCGTTGTTGTTCTCTACTTGCTTTTTCTCAATGACCTTAATATTTGGATATCAATTTCTCATGTCCAGAGCGGTCATAGTTTCATCAGTGTATGTATTTATTTTGTTAATTTCATGGTAGTATCTGCAATTCAGCGTCGGTTTCTGACTGTTGTTATGTGATTGAATATCTTTAGTTTTTATTGTATTTGCCAATGAGACACTGTTTAATAATCTTAGATTATTCAACCATGGGTTTTACACGAACGTATGATGTTATTTTTATTTCATCCCAAAATGTTGGTTCATATGTTTATAGATTTGAATCACATACTCCAGACTCTGTTGTTTGAATACACGATTCTTAATTTGTGGAATGTTGAGTCATTTTAGACTCAAAGAGGATTGATATTTTCGCATTGGATATGAATGAACTTTTTTGCTAATTTCTTTTCGTTAGGAATCTACATTATTAACCTGGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGACATCATTGTTCAGTCCGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAGCACACTGGTGCGCATGCTATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAACTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGGTGATTTAGTCTTTTGGAAGACCCATATTGTTTTCCGTTTTTAGCTCAAGTTGGAAGGATGGTCTTCTATTTTGCAATTTTAGTTTCATTTTCTTTTAGTTATACCTGACTTGTTGCTATTTTTGTCTTGCTTTGTTGGCTTCTTGCTTGCAGCCTATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTCTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATCCCTGCAAACAACAAGGGGAAACATAGCATAGGATGTCTCTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATCAATGGGATGTGATGGTAAGCCTAGAATTTTATATTATCTGCTTCAACTTTAGAAATCTGTTCTGAGATGAAGTTTGAAATTGGCTTTTGTTTGTTGGAAGTTAAATTAAACGCTTGGATTGAATTGTGCACCTGTTTTCTTATGCAGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTGTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCACTTGTTGCTTCAGATCAATGGGCTGGACAAATTTCTGATGCACAGTGGGGTGCTCCCGATTTGATTCCAGCACCAGATGCTGCTCCTGTAGTTGTTCCACCTGTTTCAAATGTCGAGTGGACCCAAGAGCCAGGTTGAACCCGAGTTTTCTTTTATGTTTTATTTGAATTTTTGTGCTTATTGGTGTGTTTTGCCTAAGACTTGGTTCAAGTTTATAAGTATCACTTATCGTTCCAGTTACCATTAACCTTCTTTCTTTCAAAAAAGGTTTTAGGCGTGCACAATGCAATTAATAGTTAGGTTGGTTAATGTGCCCGAGTTCAACAGATAAAAGGATAGTTTTTTTAAAAAAATAATTCAAATTTTTAGTAGGATTCATTTCTGATACTTTTCTTTTCTGGGTTTTTCCTTTTGCAGTAGTAGCCATAGCATCAGATGGATGGGATCCTGCAGCACCACCACCAGCACCTTCAGCAGAAGGTGGCGCCCCAGCTGCCAGTTGGTTTTAAGGGGTGCTTCCATGAGAATTTGATTTATCGTTTTAGAGTTTGCTTGTTTATGTAGGGGTTCCACCTTTTTTGGTTGCAAACTTCACTTGTCTTTTCCCTCATAGTCTACTTTTAGATTTTGAGATTGAAATTTTGACTTAAACTTTGGTTTCCTGGTACAATTTTTTGGGATATAAGAGAAATTACATGCCTAAACTATAATGAACGTTTATATAAATGCTATTTCAAATCATGGGCCCAATGGGTCCGATCCTTGCTTGAGCATGATCATAGCGATCATCTTGGC

mRNA sequence

CGAAGGAAAAGAAGAAAACCCTAGTTGCTTCTCATCTCCCACCCTCGCCAGCCGTTCTCTTCTCCTTCAAATAACTTCATATTCCGCTATTTTCCAAACCCTAACGAAGTTCCAGCCATGGCGACTGCAACAGCTCCACGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCGGCTGAGGTTCATCTTGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGCAACGATGGAATCTACATTATTAACCTGGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGACATCATTGTTCAGTCCGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAGCACACTGGTGCGCATGCTATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAACTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGCCTATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTCTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATCCCTGCAAACAACAAGGGGAAACATAGCATAGGATGTCTCTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATCAATGGGATGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTGTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCACTTGTTGCTTCAGATCAATGGGCTGGACAAATTTCTGATGCACAGTGGGGTGCTCCCGATTTGATTCCAGCACCAGATGCTGCTCCTGTAGTTGTTCCACCTGTTTCAAATGTCGAGTGGACCCAAGAGCCAGTAGTAGCCATAGCATCAGATGGATGGGATCCTGCAGCACCACCACCAGCACCTTCAGCAGAAGGTGGCGCCCCAGCTGCCAGTTGGTTTTAAGGGGTGCTTCCATGAGAATTTGATTTATCGTTTTAGAGTTTGCTTGTTTATGTAGGGGTTCCACCTTTTTTGGTTGCAAACTTCACTTGTCTTTTCCCTCATAGTCTACTTTTAGATTTTGAGATTGAAATTTTGACTTAAACTTTGGTTTCCTGGTACAATTTTTTGGGATATAAGAGAAATTACATGCCTAAACTATAATGAACGTTTATATAAATGCTATTTCAAATCATGGGCCCAATGGGTCCGATCCTTGCTTGAGCATGATCATAGCGATCATCTTGGC

Coding sequence (CDS)

ATGGCGACTGCAACAGCTCCACGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCGGCTGAGGTTCATCTTGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGCAACGATGGAATCTACATTATTAACCTGGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGACATCATTGTTCAGTCCGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAGCACACTGGTGCGCATGCTATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAACTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGCCTATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTCTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATCCCTGCAAACAACAAGGGGAAACATAGCATAGGATGTCTCTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATCAATGGGATGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTGTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCACTTGTTGCTTCAGATCAATGGGCTGGACAAATTTCTGATGCACAGTGGGGTGCTCCCGATTTGATTCCAGCACCAGATGCTGCTCCTGTAGTTGTTCCACCTGTTTCAAATGTCGAGTGGACCCAAGAGCCAGTAGTAGCCATAGCATCAGATGGATGGGATCCTGCAGCACCACCACCAGCACCTTCAGCAGAAGGTGGCGCCCCAGCTGCCAGTTGGTTTTAA

Protein sequence

MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAEGGAPAASWF*

Homology

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BLAST of CsGy3G026490.2 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 5.0e-128
Identity = 241/316 (76.27%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPL--VASDQ 243
           VLQMR TI  GH+WDVMVDLFFYREPEE KE+E +E VA PDYGI DY    L  +    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 244 WAGQISDA-QWGAPDLIPAPDAAPVVVPPVSNVEW----TQEPVVAIASDGWDPAAPPPA 303
           W   I+DA QWGA      P  AP+   P SN  W         V IA+DGWD AA PP 
Sbjct: 242 WGAPITDAPQWGA----DVPAVAPIPAVPGSN--WGDAAPMPSAVPIATDGWDAAAAPPV 301

Query: 304 ----PSAEGGAPAASW 309
               P  EG  P A W
Sbjct: 302 AVPPPVVEGVPPPAGW 311

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BLAST of CsGy3G026490.2 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 4.2e-127
Identity = 232/295 (78.64%), Postives = 243/295 (82.37%), Query Frame = 0


Query: 2   ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  LAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQ 241
           RMVLQMRGTIR G +WDVMVDLFFYREPEEAK++EEEEA A  DY I D+    + A  Q
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 WAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDG-WDPAAPPP 296
           W G I D  W         DA P  +P V  V W        A+ G W  A PPP
Sbjct: 247 WPGTI-DQSWS--------DAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125
Identity = 231/298 (77.52%), Postives = 245/298 (82.21%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LA
Sbjct: 2   ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLA 61

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWA 243
           VLQMRG I  GH+W+VMVDLFFYREPEE K++EEE+ +   DY +ADY  AP+  +DQW 
Sbjct: 182 VLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGADQW- 241

Query: 244 GQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAEG 302
             I DAQWG   + PA  A P          WT      IA DGWD AA PP P A G
Sbjct: 242 NAIPDAQWGGDVVQPANSAVPAGT-------WTD--AGPIAGDGWDAAAAPPVPGAVG 287

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.8e-123
Identity = 231/312 (74.04%), Postives = 247/312 (79.17%), Query Frame = 0


Query: 1   MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVAS 240
           LARMVLQMRGTIR G +WDVMVDLFFYREPEEAK+ EE+E VA PDY IAD+  + + + 
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 DQWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSA 300
            QW   I D  W         DA P  +P V  V W     VA     W  A PPP    
Sbjct: 241 GQWPAAI-DQPWN--------DAVPQPIPAVPAVNWAAPEAVA---GDWGEAVPPPQQIP 299

Query: 301 EGG---APAASW 309
             G    PA  W
Sbjct: 301 TAGIESVPATGW 299

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 428.3 bits (1100), Expect = 7.3e-119
Identity = 222/311 (71.38%), Postives = 245/311 (78.78%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVA 240
           LLARMVLQMRGTI AG +WDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAP 300
            DQW   QI DA W      P    AP+   P +   W+ +   A A  GW+ AAPP   
Sbjct: 241 GDQWTTAQIPDAAW------PGEGQAPISAAPAA-ASWS-DSAAAPADGGWEAAAPP--- 297

Query: 301 SAEGGAPAASW 309
               GAPAA W
Sbjct: 301 ---SGAPAAGW 297

[Close]

BLAST of CsGy3G026490.2 vs. NCBI nr
Match: XP_004144441.1 (40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical protein Csa_002182 [Cucumis sativus])

HSP 1 Score: 624 bits (1610), Expect = 1.13e-225
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWD AAPPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 309

[Close]

BLAST of CsGy3G026490.2 vs. NCBI nr
Match: XP_031738662.1 (40S ribosomal protein SA isoform X2 [Cucumis sativus])

HSP 1 Score: 618 bits (1594), Expect = 2.99e-223
Identity = 307/309 (99.35%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPV AIASDGWD AAPPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPV-AIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 308

[Close]

BLAST of CsGy3G026490.2 vs. NCBI nr
Match: XP_008460336.2 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 606 bits (1563), Expect = 1.53e-218
Identity = 302/309 (97.73%), Postives = 304/309 (98.38%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV A+ASDGWD A PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV-ALASDGWDAAVPPPAPAAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 307

[Close]

BLAST of CsGy3G026490.2 vs. NCBI nr
Match: XP_038903491.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 590 bits (1521), Expect = 3.87e-212
Identity = 294/310 (94.84%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGA LV+SD
Sbjct: 181 ARMVLQMRGTIRAGHEWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGASLVSSD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPD++PAPD   V+ PPV NVEWTQEPV A+ASDGWD A PPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDVVPAPDG--VIAPPVPNVEWTQEPV-ALASDGWDAAVPPPAPSAE 300

Query: 301 GGAP-AASWF 309
           GGAP AASWF
Sbjct: 301 GGAPPAASWF 307

[Close]

BLAST of CsGy3G026490.2 vs. NCBI nr
Match: TYK19140.1 (40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 585 bits (1509), Expect = 1.74e-210
Identity = 294/309 (95.15%), Postives = 295/309 (95.47%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV            PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV------------PPPAPAAE 296

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 296

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy TrEMBL
Match: A0A0A0L946 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 624 bits (1610), Expect = 5.46e-226
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWD AAPPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 309

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy TrEMBL
Match: A0A1S3CDH5 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1)

HSP 1 Score: 606 bits (1563), Expect = 7.42e-219
Identity = 302/309 (97.73%), Postives = 304/309 (98.38%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV A+ASDGWD A PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV-ALASDGWDAAVPPPAPAAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 307

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy TrEMBL
Match: A0A5D3D6J7 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00640 PE=3 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 8.40e-211
Identity = 294/309 (95.15%), Postives = 295/309 (95.47%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV            PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV------------PPPAPAAE 296

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 296

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy TrEMBL
Match: A0A5A7UIM9 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001100 PE=3 SV=1)

HSP 1 Score: 585 bits (1508), Expect = 1.19e-210
Identity = 293/309 (94.82%), Postives = 295/309 (95.47%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAE+HLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEIHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV            PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV------------PPPAPAAE 296

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 296

[Close]

BLAST of CsGy3G026490.2 vs. ExPASy TrEMBL
Match: A0A6J1GCP6 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1)

HSP 1 Score: 566 bits (1460), Expect = 3.58e-203
Identity = 286/309 (92.56%), Postives = 293/309 (94.82%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEE-AVAPPDYGIADYGAAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWG PD++P P AA  VVPPV +VEW QEPV A+ASDGWD A PPPAPSAE
Sbjct: 241 QWAGQISDAQWGDPDVVPPPVAA-AVVPPVPSVEWAQEPV-ALASDGWDVAVPPPAPSAE 300

Query: 301 GGAP-AASW 308
           G AP AASW
Sbjct: 301 GAAPPAASW 306

[Close]

BLAST of CsGy3G026490.2 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 428.3 bits (1100), Expect = 5.2e-120
Identity = 222/311 (71.38%), Postives = 245/311 (78.78%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVA 240
           LLARMVLQMRGTI AG +WDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAP 300
            DQW   QI DA W      P    AP+   P +   W+ +   A A  GW+ AAPP   
Sbjct: 241 GDQWTTAQIPDAAW------PGEGQAPISAAPAA-ASWS-DSAAAPADGGWEAAAPP--- 297

Query: 301 SAEGGAPAASW 309
               GAPAA W
Sbjct: 301 ---SGAPAAGW 297

[Close]

BLAST of CsGy3G026490.2 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-119
Identity = 221/311 (71.06%), Postives = 243/311 (78.14%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVA 240
           LLARMVLQMRGTI AG +WDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAP 300
            DQW   QI DA W      P    AP+   P +   W+       A  GW+ AAPP   
Sbjct: 241 GDQWTTAQIPDAAW------PGEGQAPISAAPAA-ASWSDS-----ADGGWEAAAPP--- 293

Query: 301 SAEGGAPAASW 309
               GAPAA W
Sbjct: 301 ---SGAPAAGW 293

[Close]

BLAST of CsGy3G026490.2 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 412.5 bits (1059), Expect = 2.9e-115
Identity = 214/294 (72.79%), Postives = 238/294 (80.95%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQW- 243
           VLQMRGTI A  +WDVMVDLFFYREPEEAK++ +EEA    DYG        +V  DQW 
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYG--------MVGGDQWT 246

Query: 244 AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPA 297
             QISDA W      P   AAP V              V +A+ GW+ A+ P A
Sbjct: 247 TAQISDAAWSGEVEQPI-SAAPAV-------------GVTVAA-GWEAASVPAA 277

[Close]

BLAST of CsGy3G026490.2 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-101
Identity = 174/199 (87.44%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHQWDVMVD 203
           VLQMRGTI A  +WDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:

BLAST of CsGy3G026490.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5BUU4	5.0e-128	76.27	40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV...	[more]
O22518	4.2e-127	78.64	40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1	[more]
O80377	1.8e-125	77.52	40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1	[more]
O65751	2.8e-123	74.04	40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1	[more]
Q08682	7.3e-119	71.38	40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3	[more]

BLAST of CsGy3G026490.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144441.1	1.13e-225	99.68	40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical p...	[more]
XP_031738662.1	2.99e-223	99.35	40S ribosomal protein SA isoform X2 [Cucumis sativus]	[more]
XP_008460336.2	1.53e-218	97.73	PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]	[more]
XP_038903491.1	3.87e-212	94.84	40S ribosomal protein SA-like [Benincasa hispida]	[more]
TYK19140.1	1.74e-210	95.15	40S ribosomal protein SA-like [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G026490.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L946	5.46e-226	99.68	40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1	[more]
A0A1S3CDH5	7.42e-219	97.73	40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1	[more]
A0A5D3D6J7	8.40e-211	95.15	40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7UIM9	1.19e-210	94.82	40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1GCP6	3.58e-203	92.56	40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1	[more]

BLAST of CsGy3G026490.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72370.1	5.2e-120	71.38	40s ribosomal protein SA	[more]
AT1G72370.2	1.1e-119	71.06	40s ribosomal protein SA	[more]
AT3G04770.2	2.9e-115	72.79	40s ribosomal protein SA B	[more]
AT3G04770.1	1.4e-101	87.44	40s ribosomal protein SA B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 159..173 score: 53.64 coord: 121..138 score: 44.62 coord: 96..113 score: 47.01 coord: 47..56 score: 64.92 coord: 138..149 score: 51.15 coord: 17..35 score: 36.11
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 20..113 e-value: 3.2E-13 score: 49.4 coord: 119..184 e-value: 5.1E-12 score: 45.5
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 20..186 e-value: 1.85792E-73 score: 222.457
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	TIGRFAM	TIGR01012	TIGR01012	coord: 12..208 e-value: 6.7E-96 score: 317.4
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	PANTHER	PTHR11489	40S RIBOSOMAL PROTEIN SA	coord: 9..308
None	No IPR available	GENE3D	3.40.50.10490		coord: 16..222 e-value: 1.4E-104 score: 349.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..309
None	No IPR available	PANTHER	PTHR11489:SF25	40S RIBOSOMAL PROTEIN SA	coord: 9..308
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 17..28
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 121..145
IPR027498	Ribosomal protein S2, eukaryotic	HAMAP	MF_03015	Ribosomal_S2_euk	coord: 4..278 score: 50.543442
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 12..202

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G026490	CsGy3G026490	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G026490.2.utr5p1	CsGy3G026490.2.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G026490.2.exon1	CsGy3G026490.2.exon1	exon
CsGy3G026490.2.exon2	CsGy3G026490.2.exon2	exon
CsGy3G026490.2.exon3	CsGy3G026490.2.exon3	exon
CsGy3G026490.2.exon4	CsGy3G026490.2.exon4	exon
CsGy3G026490.2.exon5	CsGy3G026490.2.exon5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G026490.2	cds.CsGy3G026490.2	CDS
cds.CsGy3G026490.2	cds.CsGy3G026490.2_2	CDS
cds.CsGy3G026490.2	cds.CsGy3G026490.2_3	CDS
cds.CsGy3G026490.2	cds.CsGy3G026490.2_4	CDS
cds.CsGy3G026490.2	cds.CsGy3G026490.2_5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G026490.2.utr3p1	CsGy3G026490.2.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G026490.2	CsGy3G026490.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000028	ribosomal small subunit assembly
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome