CsGy3G026490 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G026490
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description40S ribosomal protein SA
LocationGy14Chr3: 27325603 .. 27328064 (+)
RNA-Seq ExpressionCsGy3G026490
SyntenyCsGy3G026490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAGGAAAAGAAGAAAACCCTAGTTGCTTCTCATCTCCCACCCTCGCCAGCCGTTCTCTTCTCCTTCAAATAACTTCATATTCCGCTATTTTCCAAACCCTAACGAAGTTCCAGCCATGGCGACTGCAACAGCTCCACGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCGGCTGAGGTTCATCTTGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGCAACGATGGTACTTTCTTAATACTCCTTTTAACTTTTAGATCTTCACATTTGATTTTCATTCTGCTCTCCACGTTTTCAACCTTTGCGGTGTTTTTTCATGCACTGGAACTTTCAGTACTAATGTGCACTCGTTGTTGTTCTCTACTTGCTTTTTCTCAATGACCTTAATATTTGGATATCAATTTCTCATGTCCAGAGCGGTCATAGTTTCATCAGTGTATGTATTTATTTTGTTAATTTCATGGTAGTATCTGCAATTCAGCGTCGGTTTCTGACTGTTGTTATGTGATTGAATATCTTTAGTTTTTATTGTATTTGCCAATGAGACACTGTTTAATAATCTTAGATTATTCAACCATGGGTTTTACACGAACGTATGATGTTATTTTTATTTCATCCCAAAATGTTGGTTCATATGTTTATAGATTTGAATCACATACTCCAGACTCTGTTGTTTGAATACACGATTCTTAATTTGTGGAATGTTGAGTCATTTTAGACTCAAAGAGGATTGATATTTTCGCATTGGATATGAATGAACTTTTTTGCTAATTTCTTTTCGTTAGGAATCTACATTATTAACCTGGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGACATCATTGTTCAGTCCGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAGCACACTGGTGCGCATGCTATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAACTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGGTGATTTAGTCTTTTGGAAGACCCATATTGTTTTCCGTTTTTAGCTCAAGTTGGAAGGATGGTCTTCTATTTTGCAATTTTAGTTTCATTTTCTTTTAGTTATACCTGACTTGTTGCTATTTTTGTCTTGCTTTGTTGGCTTCTTGCTTGCAGCCTATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTCTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATCCCTGCAAACAACAAGGGGAAACATAGCATAGGATGTCTCTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATCAATGGGATGTGATGGTAAGCCTAGAATTTTATATTATCTGCTTCAACTTTAGAAATCTGTTCTGAGATGAAGTTTGAAATTGGCTTTTGTTTGTTGGAAGTTAAATTAAACGCTTGGATTGAATTGTGCACCTGTTTTCTTATGCAGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTGTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCACTTGTTGCTTCAGATCAATGGGCTGGACAAATTTCTGATGCACAGTGGGGTGCTCCCGATTTGATTCCAGCACCAGATGCTGCTCCTGTAGTTGTTCCACCTGTTTCAAATGTCGAGTGGACCCAAGAGCCAGGTTGAACCCGAGTTTTCTTTTATGTTTTATTTGAATTTTTGTGCTTATTGGTGTGTTTTGCCTAAGACTTGGTTCAAGTTTATAAGTATCACTTATCGTTCCAGTTACCATTAACCTTCTTTCTTTCAAAAAAGGTTTTAGGCGTGCACAATGCAATTAATAGTTAGGTTGGTTAATGTGCCCGAGTTCAACAGATAAAAGGATAGTTTTTTTAAAAAAATAATTCAAATTTTTAGTAGGATTCATTTCTGATACTTTTCTTTTCTGGGTTTTTCCTTTTGCAGTAGTAGCCATAGCATCAGATGGATGGGATCCTGCAGCACCACCACCAGCACCTTCAGCAGAAGGTGGCGCCCCAGCTGCCAGTTGGTTTTAAGGGGTGCTTCCATGAGAATTTGATTTATCGTTTTAGAGTTTGCTTGTTTATGTAGGGGTTCCACCTTTTTTGGTTGCAAACTTCACTTGTCTTTTCCCTCATAGTCTACTTTTAGATTTTGAGATTGAAATTTTGACTTAAACTTTGGTTTCCTGGTACAATTTTTTGGGATATAAGAGAAATTACATGCCTAAACTATAATGAACGTTTATATAAATGCTATTTCAAATCATGGGCCCAATGGGTCCGATCCTTGCTTGAGCATGATCATAGCGATCATCTTGGC

mRNA sequence

CGAAGGAAAAGAAGAAAACCCTAGTTGCTTCTCATCTCCCACCCTCGCCAGCCGTTCTCTTCTCCTTCAAATAACTTCATATTCCGCTATTTTCCAAACCCTAACGAAGTTCCAGCCATGGCGACTGCAACAGCTCCACGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCGGCTGAGGTTCATCTTGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGCAACGATGGAATCTACATTATTAACCTGGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGACATCATTGTTCAGTCCGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAGCACACTGGTGCGCATGCTATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAACTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGCCTATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTCTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATCCCTGCAAACAACAAGGGGAAACATAGCATAGGATGTCTCTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATCAATGGGATGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTGTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCACTTGTTGCTTCAGATCAATGGGCTGGACAAATTTCTGATGCACAGTGGGGTGCTCCCGATTTGATTCCAGCACCAGATGCTGCTCCTGTAGTTGTTCCACCTGTTTCAAATGTCGAGTGGACCCAAGAGCCAGTAGTAGCCATAGCATCAGATGGATGGGATCCTGCAGCACCACCACCAGCACCTTCAGCAGAAGGTGGCGCCCCAGCTGCCAGTTGGTTTTAAGGGGTGCTTCCATGAGAATTTGATTTATCGTTTTAGAGTTTGCTTGTTTATGTAGGGGTTCCACCTTTTTTGGTTGCAAACTTCACTTGTCTTTTCCCTCATAGTCTACTTTTAGATTTTGAGATTGAAATTTTGACTTAAACTTTGGTTTCCTGGTACAATTTTTTGGGATATAAGAGAAATTACATGCCTAAACTATAATGAACGTTTATATAAATGCTATTTCAAATCATGGGCCCAATGGGTCCGATCCTTGCTTGAGCATGATCATAGCGATCATCTTGGC

Coding sequence (CDS)

ATGGCGACTGCAACAGCTCCACGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCGGCTGAGGTTCATCTTGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGCAACGATGGAATCTACATTATTAACCTGGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGACATCATTGTTCAGTCCGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAGCACACTGGTGCGCATGCTATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAACTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGCCTATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTCTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATCCCTGCAAACAACAAGGGGAAACATAGCATAGGATGTCTCTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATCAATGGGATGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTGTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCACTTGTTGCTTCAGATCAATGGGCTGGACAAATTTCTGATGCACAGTGGGGTGCTCCCGATTTGATTCCAGCACCAGATGCTGCTCCTGTAGTTGTTCCACCTGTTTCAAATGTCGAGTGGACCCAAGAGCCAGTAGTAGCCATAGCATCAGATGGATGGGATCCTGCAGCACCACCACCAGCACCTTCAGCAGAAGGTGGCGCCCCAGCTGCCAGTTGGTTTTAA

Protein sequence

MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAEGGAPAASWF*
Homology
[Close]
BLAST of CsGy3G026490 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 5.0e-128
Identity = 241/316 (76.27%), Postives = 252/316 (79.75%), Query Frame = 0 

Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPL--VASDQ 243
           VLQMR TI  GH+WDVMVDLFFYREPEE KE+E +E VA PDYGI DY    L  +    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 244 WAGQISDA-QWGAPDLIPAPDAAPVVVPPVSNVEW----TQEPVVAIASDGWDPAAPPPA 303
           W   I+DA QWGA      P  AP+   P SN  W         V IA+DGWD AA PP 
Sbjct: 242 WGAPITDAPQWGA----DVPAVAPIPAVPGSN--WGDAAPMPSAVPIATDGWDAAAAPPV 301

Query: 304 ----PSAEGGAPAASW 309
               P  EG  P A W
Sbjct: 302 AVPPPVVEGVPPPAGW 311

[Close]
BLAST of CsGy3G026490 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 4.2e-127
Identity = 232/295 (78.64%), Postives = 243/295 (82.37%), Query Frame = 0 

Query: 2   ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  LAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQ 241
           RMVLQMRGTIR G +WDVMVDLFFYREPEEAK++EEEEA A  DY I D+    + A  Q
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 WAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDG-WDPAAPPP 296
           W G I D  W         DA P  +P V  V W        A+ G W  A PPP
Sbjct: 247 WPGTI-DQSWS--------DAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]
BLAST of CsGy3G026490 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125
Identity = 231/298 (77.52%), Postives = 245/298 (82.21%), Query Frame = 0 

Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LA
Sbjct: 2   ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLA 61

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWA 243
           VLQMRG I  GH+W+VMVDLFFYREPEE K++EEE+ +   DY +ADY  AP+  +DQW 
Sbjct: 182 VLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGADQW- 241

Query: 244 GQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAEG 302
             I DAQWG   + PA  A P          WT      IA DGWD AA PP P A G
Sbjct: 242 NAIPDAQWGGDVVQPANSAVPAGT-------WTD--AGPIAGDGWDAAAAPPVPGAVG 287

[Close]
BLAST of CsGy3G026490 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.8e-123
Identity = 231/312 (74.04%), Postives = 247/312 (79.17%), Query Frame = 0 

Query: 1   MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVAS 240
           LARMVLQMRGTIR G +WDVMVDLFFYREPEEAK+ EE+E VA PDY IAD+  + + + 
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 DQWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSA 300
            QW   I D  W         DA P  +P V  V W     VA     W  A PPP    
Sbjct: 241 GQWPAAI-DQPWN--------DAVPQPIPAVPAVNWAAPEAVA---GDWGEAVPPPQQIP 299

Query: 301 EGG---APAASW 309
             G    PA  W
Sbjct: 301 TAGIESVPATGW 299

[Close]
BLAST of CsGy3G026490 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 428.3 bits (1100), Expect = 7.3e-119
Identity = 222/311 (71.38%), Postives = 245/311 (78.78%), Query Frame = 0 

Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVA 240
           LLARMVLQMRGTI AG +WDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAP 300
            DQW   QI DA W      P    AP+   P +   W+ +   A A  GW+ AAPP   
Sbjct: 241 GDQWTTAQIPDAAW------PGEGQAPISAAPAA-ASWS-DSAAAPADGGWEAAAPP--- 297

Query: 301 SAEGGAPAASW 309
               GAPAA W
Sbjct: 301 ---SGAPAAGW 297

[Close]
BLAST of CsGy3G026490 vs. NCBI nr
Match: XP_004144441.1 (40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical protein Csa_002182 [Cucumis sativus])

HSP 1 Score: 624 bits (1610), Expect = 1.13e-225
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWD AAPPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 309

[Close]
BLAST of CsGy3G026490 vs. NCBI nr
Match: XP_031738662.1 (40S ribosomal protein SA isoform X2 [Cucumis sativus])

HSP 1 Score: 618 bits (1594), Expect = 2.99e-223
Identity = 307/309 (99.35%), Postives = 307/309 (99.35%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPV AIASDGWD AAPPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPV-AIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 308

[Close]
BLAST of CsGy3G026490 vs. NCBI nr
Match: XP_008460336.2 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 606 bits (1563), Expect = 1.53e-218
Identity = 302/309 (97.73%), Postives = 304/309 (98.38%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV A+ASDGWD A PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV-ALASDGWDAAVPPPAPAAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 307

[Close]
BLAST of CsGy3G026490 vs. NCBI nr
Match: XP_038903491.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 590 bits (1521), Expect = 3.87e-212
Identity = 294/310 (94.84%), Postives = 300/310 (96.77%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGA LV+SD
Sbjct: 181 ARMVLQMRGTIRAGHEWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGASLVSSD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPD++PAPD   V+ PPV NVEWTQEPV A+ASDGWD A PPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDVVPAPDG--VIAPPVPNVEWTQEPV-ALASDGWDAAVPPPAPSAE 300

Query: 301 GGAP-AASWF 309
           GGAP AASWF
Sbjct: 301 GGAPPAASWF 307

[Close]
BLAST of CsGy3G026490 vs. NCBI nr
Match: TYK19140.1 (40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 585 bits (1509), Expect = 1.74e-210
Identity = 294/309 (95.15%), Postives = 295/309 (95.47%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV            PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV------------PPPAPAAE 296

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 296

[Close]
BLAST of CsGy3G026490 vs. ExPASy TrEMBL
Match: A0A0A0L946 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 624 bits (1610), Expect = 5.46e-226
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWD AAPPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 309

[Close]
BLAST of CsGy3G026490 vs. ExPASy TrEMBL
Match: A0A1S3CDH5 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1)

HSP 1 Score: 606 bits (1563), Expect = 7.42e-219
Identity = 302/309 (97.73%), Postives = 304/309 (98.38%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV A+ASDGWD A PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV-ALASDGWDAAVPPPAPAAE 300

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 307

[Close]
BLAST of CsGy3G026490 vs. ExPASy TrEMBL
Match: A0A5D3D6J7 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00640 PE=3 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 8.40e-211
Identity = 294/309 (95.15%), Postives = 295/309 (95.47%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV            PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV------------PPPAPAAE 296

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 296

[Close]
BLAST of CsGy3G026490 vs. ExPASy TrEMBL
Match: A0A5A7UIM9 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001100 PE=3 SV=1)

HSP 1 Score: 585 bits (1508), Expect = 1.19e-210
Identity = 293/309 (94.82%), Postives = 295/309 (95.47%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAE+HLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEIHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWGAPDLIPAPDAA VVVPPVSNVEWTQEPV            PPPAP+AE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAA-VVVPPVSNVEWTQEPV------------PPPAPAAE 296

Query: 301 GGAPAASWF 309
           GGAPAASWF
Sbjct: 301 GGAPAASWF 296

[Close]
BLAST of CsGy3G026490 vs. ExPASy TrEMBL
Match: A0A6J1GCP6 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1)

HSP 1 Score: 566 bits (1460), Expect = 3.58e-203
Identity = 286/309 (92.56%), Postives = 293/309 (94.82%), Query Frame = 0 

Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEE-AVAPPDYGIADYGAAPLVASD 240

Query: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAE 300
           QWAGQISDAQWG PD++P P AA  VVPPV +VEW QEPV A+ASDGWD A PPPAPSAE
Sbjct: 241 QWAGQISDAQWGDPDVVPPPVAA-AVVPPVPSVEWAQEPV-ALASDGWDVAVPPPAPSAE 300

Query: 301 GGAP-AASW 308
           G AP AASW
Sbjct: 301 GAAPPAASW 306

[Close]
BLAST of CsGy3G026490 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 428.3 bits (1100), Expect = 5.2e-120
Identity = 222/311 (71.38%), Postives = 245/311 (78.78%), Query Frame = 0 

Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVA 240
           LLARMVLQMRGTI AG +WDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAP 300
            DQW   QI DA W      P    AP+   P +   W+ +   A A  GW+ AAPP   
Sbjct: 241 GDQWTTAQIPDAAW------PGEGQAPISAAPAA-ASWS-DSAAAPADGGWEAAAPP--- 297

Query: 301 SAEGGAPAASW 309
               GAPAA W
Sbjct: 301 ---SGAPAAGW 297

[Close]
BLAST of CsGy3G026490 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-119
Identity = 221/311 (71.06%), Postives = 243/311 (78.14%), Query Frame = 0 

Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVA 240
           LLARMVLQMRGTI AG +WDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAP 300
            DQW   QI DA W      P    AP+   P +   W+       A  GW+ AAPP   
Sbjct: 241 GDQWTTAQIPDAAW------PGEGQAPISAAPAA-ASWSDS-----ADGGWEAAAPP--- 293

Query: 301 SAEGGAPAASW 309
               GAPAA W
Sbjct: 301 ---SGAPAAGW 293

[Close]
BLAST of CsGy3G026490 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 412.5 bits (1059), Expect = 2.9e-115
Identity = 214/294 (72.79%), Postives = 238/294 (80.95%), Query Frame = 0 

Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQW- 243
           VLQMRGTI A  +WDVMVDLFFYREPEEAK++ +EEA    DYG        +V  DQW 
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYG--------MVGGDQWT 246

Query: 244 AGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPA 297
             QISDA W      P   AAP V              V +A+ GW+ A+ P A
Sbjct: 247 TAQISDAAWSGEVEQPI-SAAPAV-------------GVTVAA-GWEAASVPAA 277

[Close]
BLAST of CsGy3G026490 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-101
Identity = 174/199 (87.44%), Postives = 191/199 (95.98%), Query Frame = 0 

Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHQWDVMVD 203
           VLQMRGTI A  +WDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:
BLAST of CsGy3G026490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A5BUU45.0e-12876.2740S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
O225184.2e-12778.6440S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
O803771.8e-12577.5240S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
O657512.8e-12374.0440S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
Q086827.3e-11971.3840S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3[more]
BLAST of CsGy3G026490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144441.11.13e-22599.6840S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical p... [more]
XP_031738662.12.99e-22399.3540S ribosomal protein SA isoform X2 [Cucumis sativus][more]
XP_008460336.21.53e-21897.73PREDICTED: 40S ribosomal protein SA-like [Cucumis melo][more]
XP_038903491.13.87e-21294.8440S ribosomal protein SA-like [Benincasa hispida][more]
TYK19140.11.74e-21095.1540S ribosomal protein SA-like [Cucumis melo var. makuwa][more]
BLAST of CsGy3G026490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9465.46e-22699.6840S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1[more]
A0A1S3CDH57.42e-21997.7340S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1[more]
A0A5D3D6J78.40e-21195.1540S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7UIM91.19e-21094.8240S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A6J1GCP63.58e-20392.5640S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1[more]
BLAST of CsGy3G026490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72370.15.2e-12071.3840s ribosomal protein SA [more]
AT1G72370.21.1e-11971.0640s ribosomal protein SA [more]
AT3G04770.22.9e-11572.7940s ribosomal protein SA B [more]
AT3G04770.11.4e-10187.4440s ribosomal protein SA B [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 159..173
score: 53.64
coord: 121..138
score: 44.62
coord: 96..113
score: 47.01
coord: 47..56
score: 64.92
coord: 138..149
score: 51.15
coord: 17..35
score: 36.11
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 20..113
e-value: 3.2E-13
score: 49.4
coord: 119..184
e-value: 5.1E-12
score: 45.5
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 20..186
e-value: 1.85792E-73
score: 222.457
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 12..208
e-value: 6.7E-96
score: 317.4
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 9..308
NoneNo IPR availableGENE3D3.40.50.10490coord: 16..222
e-value: 1.4E-104
score: 349.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..309
NoneNo IPR availablePANTHERPTHR11489:SF2540S RIBOSOMAL PROTEIN SAcoord: 9..308
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 4..278
score: 50.543442
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G026490.2CsGy3G026490.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome