CsGy3G024360.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy3G024360.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
LocationGy14Chr3: 24387204 .. 24389896 (+)
Sequence length834
RNA-Seq ExpressionCsGy3G024360.1
SyntenyCsGy3G024360.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCGGAATCCTGAGGCGAGCATTATCTAGGGTTTCTGCGTCTTCACCTTCAAGGTTCCTTCGAATTCGAGCTCACGCTTCTGAAGCTCAAGCTCAGCAAGTCGACCAAAAAGCGGCTGCCTCATCGCACCTAAAGACATTCGCAATCTACCGATGGAACCCCGATAGTCCTTCTAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGTGGCCCCATGGTTCTTGATGCGCTGATCAAAATCAAGAACGAGATCGACCCGTCTCTTACCTTCCGCCGCTCCTGCCGTGAAGGGATCTGCGGTTCCTGCGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTTCCTCTGGAGATTCCTCCACGATTACGCCGCTTCCTCATATGTTCGTGATCAAGGATTTAGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAACCGCCTGTACCCGGGAAGGAGATTCTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCATGCCCCAGCTATTGGTGGAACCCCGAGTCTTATCTTGGACCAGCCGCTTTGCTCCATGCCAATAGGTAATTCGTTCACTTTGATTGTTTTGGTTACTCTGTGCTTCTTTTTAGAAATGAATGGAAAACAGGGACTTCTTAGAGGAATTAAGAAGTTACTTGTGGTGGTTGTAAAATTCAAAGGCGTGTTTATTTCGTTTCATTTCGGGTGGATTAATAGCAGACGGCAATAATTTGGTTATATGGGTTCTATTGGGGCTTAAGGTGCGTTTTAAACTTTTAAGGAACTAGAAAGCAGTTGCTATAGTGAAATGGAATGCATAATAAAACAAAAAAGCCTTAAGATGGTAGACCACCGGCCTATCCTGAATATGAATATTGCGAACTATAAGATTTCTAGTGTATAATAACTAGTATTGCCATAAAAGTAGAGAAGGGAAACCATTGATATATGGTCTTCAAGTGAAGAATTAGAAGGGAGAGGAGCTAAAAACGAATGAAGAGACTTATCAGAAGAAGGGAAATTCTGTTTATGGAAATGAGAGAAAGAACAGATGTCAGAGTGTCGAAAAGAATTGAAGAAACTGGAGAAACTTTGAGGTATTTCAAAGCGTGTGTTTATCTGCAATTAGTGAGCCTAGAGTTTGGGCACAGCATATGCGTAGGTGTGTCTACTAGATGGAGAAACGTTTTATTGGGGTTCTACAACAGCATATTTGTACACCACTTGCGGTACTAACAGTATCAAATCAGTTGTGTATTATTCACACAACTTTCACACTGGCAAGGATATAGTCAGGTTCTCTTCTTAGTTCTTGGAAGGTGCTTTCCTCTCTTCGGAGCTGGGAAAATTGGTACTTGCATGGATGGACGAACTTTTATGATTTGATTGTTGCCTATTTTATCGAGAATCAAGTGATTGTTTTGGTTGTTTGTCACTGTTAAACAAAGTCATCATATGTCTTCAAAGATATTATCTTAAACTTATTTGTTTGCTTTAGTTTCTTGGTGAGTTTCAACGTCAGTCCTTACTTTGTAATAGTTCACTAGGTGAAGAAAGAATGGACGGATTGAATGATCTGTCTTGTAATTTTTTTTGCTGATATTGAATAAAAGTGTTTTTGGTCCACAAAAATTATTCAAGAATAGTCAACTTGTTTGGTGATGTCTGGAAGCCAGATTGGCTATGCCATGCTTCCTAAACCATCTAGAGGTTAACATTTTATAAATTACGACTTAGGAGAATTTTATTCAACATTTTACTGGTATCCTACGTGATGTAGAAAGCTGTAATTATTCTATGTGTTATTTGATTTGCTGTATGTGAACTTAGAAGGAATAAGTACTATGGGGTAACCTAAGTAAAATAATAGGGGATCAAAGTTAATGAGTTCAAGTGATGATGTTTGCTTAGGATTTGAATCCTATGAGTTTCTTTGACTACCAAGTATAGTAACGTCTAGCAATTCTTCATGAAAATGAGCTGTTATAAGCTTACCTAAGACTCACAATTTTTTTTAAAAAAAATGCAAAATAGAAGATAAAAATTTCAAAGGAATGTGATCAATAGTAAAGTTCTACATTTTCCTGAAATATCTTTGTATTCAACCCTTACCCTGCATTCATACTAATTCCAGACTTCATAATTTCAATTTTTATTTTTCTATTTTGATGTAGGCTTCATAAGTTCATGTTGTATTGTATCTTATGTAATTTCATGATTTACTTGTTCCTTTCTTTCACCTCACAACGTTCTATCTGTCACCATGTCAACACTAATTGCAAGAAGATGATGCAGATCATATTAATTCGATGTCAAAAATCATTCCCAATTGCCTTTCTTGGTTATTTTATTTCAGTTTTTATCAAAGACAAATTTTCAGTTTCAAAATGGTCCCTTTAATCCCATTTGTGTACATGCACAGGTGGATAAGTGATAGCCGTGATGAATATACCAAGGAACGACTTGACGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCCTGTCCAAAGGGTTTGAACCCTGGAAAACAGATCCAAAATATCAAAGGCCTTCAGCTTGTGGGTTGA

mRNA sequence

ATGGCCACCGGAATCCTGAGGCGAGCATTATCTAGGGTTTCTGCGTCTTCACCTTCAAGGTTCCTTCGAATTCGAGCTCACGCTTCTGAAGCTCAAGCTCAGCAAGTCGACCAAAAAGCGGCTGCCTCATCGCACCTAAAGACATTCGCAATCTACCGATGGAACCCCGATAGTCCTTCTAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGTGGCCCCATGGTTCTTGATGCGCTGATCAAAATCAAGAACGAGATCGACCCGTCTCTTACCTTCCGCCGCTCCTGCCGTGAAGGGATCTGCGGTTCCTGCGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTTCCTCTGGAGATTCCTCCACGATTACGCCGCTTCCTCATATGTTCGTGATCAAGGATTTAGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAACCGCCTGTACCCGGGAAGGAGATTCTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCATGCCCCAGCTATTGGTGGAACCCCGAGTCTTATCTTGGACCAGCCGCTTTGCTCCATGCCAATAGGTGGATAAGTGATAGCCGTGATGAATATACCAAGGAACGACTTGACGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCCTGTCCAAAGGGTTTGAACCCTGGAAAACAGATCCAAAATATCAAAGGCCTTCAGCTTGTGGGTTGA

Coding sequence (CDS)

ATGGCCACCGGAATCCTGAGGCGAGCATTATCTAGGGTTTCTGCGTCTTCACCTTCAAGGTTCCTTCGAATTCGAGCTCACGCTTCTGAAGCTCAAGCTCAGCAAGTCGACCAAAAAGCGGCTGCCTCATCGCACCTAAAGACATTCGCAATCTACCGATGGAACCCCGATAGTCCTTCTAAACCAGAGCTTCAGGAGTACAAGATCGATCTCAAAGAGTGTGGCCCCATGGTTCTTGATGCGCTGATCAAAATCAAGAACGAGATCGACCCGTCTCTTACCTTCCGCCGCTCCTGCCGTGAAGGGATCTGCGGTTCCTGCGCGATGAACATCGATGGATGTAATGGATTGGCTTGCTTGACCAAGATTTCCTCTGGAGATTCCTCCACGATTACGCCGCTTCCTCATATGTTCGTGATCAAGGATTTAGTGGTGGACATGACCAATTTCTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAACCGCCTGTACCCGGGAAGGAGATTCTTCAGAGTAAGAAAGATAGGGCTAAGTTGGATGGAATGTATGAGTGTATATTGTGTGCTTGCTGTAGTACATCATGCCCCAGCTATTGGTGGAACCCCGAGTCTTATCTTGGACCAGCCGCTTTGCTCCATGCCAATAGGTGGATAAGTGATAGCCGTGATGAATATACCAAGGAACGACTTGACGCAATAAATGATGAATTCAAGCTCTATCGTTGTCATACTATTCTGAACTGTGCCCGTGCCTGTCCAAAGGGTTTGAACCCTGGAAAACAGATCCAAAATATCAAAGGCCTTCAGCTTGTGGGTTGA

Protein sequence

MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG*
Homology
[Close]
BLAST of CsGy3G024360.1 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 459.1 bits (1180), Expect = 3.4e-128
Identity = 221/280 (78.93%), Postives = 242/280 (86.43%), Query Frame = 0 

Query: 1   MATGILRRALSRVSA--SSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDS 60
           MA G++ R +   S+  S+ +R +  R  ++ ++AQ         + LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKISSGD-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180
           CLTKI SG   +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+A
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 445.7 bits (1145), Expect = 3.9e-124
Identity = 215/278 (77.34%), Postives = 239/278 (85.97%), Query Frame = 0 

Query: 1   MATGILRRALSRVSA--SSPSRFLRIRAHASEAQAQ-QVDQKAAASSHLKTFAIYRWNPD 60
           MA+G++ R +    +  ++ +R +  R  ++ A+A+ +        S+LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKI-SSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 180
           ACLTKI      +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLD 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-117
Identity = 207/279 (74.19%), Postives = 229/279 (82.08%), Query Frame = 0 

Query: 2   ATGILRRALSRVSASSP---SRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDS 61
           A  +LRR+ +  +  SP   SR +  + H+S         KA A++  KTF+IYRW+PDS
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANT--KTFSIYRWDPDS 62

Query: 62  PS-KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP L++YK+DL +CGPMVLD L+KIKNE DPSLTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKISSGDS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 181
           ACLTKISS  S STI+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  PP PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLD 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD++TKERLD
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQL 276
           +INDEFKLYRCHTI NC  ACPKGLNP K I  IK LQL
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy Swiss-Prot
Match: P21914 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster OX=7227 GN=SdhB PE=2 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 2.8e-93
Identity = 165/272 (60.66%), Postives = 203/272 (74.63%), Query Frame = 0 

Query: 7   RRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSP-SKPELQ 66
           R+ LSRV +      +R  ++ +    QQ   K A    +K F IYRWNPD+   KP +Q
Sbjct: 7   RQILSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQ 66

Query: 67  EYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTK--I 126
            Y++DL+ECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI G N LAC++K  I
Sbjct: 67  TYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDI 126

Query: 127 SSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP-PVPGK-EILQSKKDR 186
           ++  S  + PLPHM+V++DLV DM NFY QY++I+PWL+RK+E     GK + LQS +DR
Sbjct: 127 NTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDR 186

Query: 187 AKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDE 246
           +KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE + ERL+ + D 
Sbjct: 187 SKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDP 246

Query: 247 FKLYRCHTILNCARACPKGLNPGKQIQNIKGL 274
           F +YRCHTI+NC R CPKGLNPG+ I  IK L
Sbjct: 247 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 278

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy Swiss-Prot
Match: Q6FWS8 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=SDH2 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.6e-93
Identity = 159/235 (67.66%), Postives = 184/235 (78.30%), Query Frame = 0 

Query: 40  AAASSHLKTFAIYRWNPDSPS-KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRS 99
           A +   LKTF IYRWNPD P+ KP LQEYK+DL++CGPMVLDAL+KIKNE D +LTFRRS
Sbjct: 14  ATSVPRLKTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRS 73

Query: 100 CREGICGSCAMNIDGCNGLACLTKISSGDSST--ITPLPHMFVIKDLVVDMTNFYNQYKS 159
           CREGICGSCAMNI G N LACL KI   +S T  I PLPHMF++KDLV D+T FY QYKS
Sbjct: 74  CREGICGSCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKS 133

Query: 160 IEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAAL 219
           I+P+L+R ++ P  GKE+LQS  DR KLDG+YECILCACCSTSCPSYWWN E YLGPA L
Sbjct: 134 IQPYLQR-TDYPADGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVL 193

Query: 220 LHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIK 272
           + A RW+ DSRD+ TK R   + +   LYRCHTI+NC R CPKGLNPG+ I  IK
Sbjct: 194 MQAYRWLIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIK 247

[Close]
BLAST of CsGy3G024360.1 vs. NCBI nr
Match: XP_004145686.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucumis sativus] >KGN58222.1 hypothetical protein Csa_017514 [Cucumis sativus])

HSP 1 Score: 569 bits (1467), Expect = 5.93e-205
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277

[Close]
BLAST of CsGy3G024360.1 vs. NCBI nr
Match: XP_008450036.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucumis melo] >ADN34136.1 succinate dehydrogenase [Cucumis melo subsp. melo])

HSP 1 Score: 551 bits (1419), Expect = 1.24e-197
Identity = 266/277 (96.03%), Postives = 273/277 (98.56%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MATGILRR LSRVSASSPSRF+RIRAHASEA+AQQV+QKA ASS+LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CsGy3G024360.1 vs. NCBI nr
Match: XP_038898422.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 546 bits (1408), Expect = 5.87e-196
Identity = 265/276 (96.01%), Postives = 273/276 (98.91%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MATGILRRA+SRVSA+SPSRF+RIRAHASEA+AQQV+QKAAASS+LKTFAIYRWNP+SPS
Sbjct: 1   MATGILRRAISRVSATSPSRFVRIRAHASEAEAQQVEQKAAASSNLKTFAIYRWNPNSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKISSG SS ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKISSGASSMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLV 276
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLV
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKHLQLV 276

[Close]
BLAST of CsGy3G024360.1 vs. NCBI nr
Match: XP_022935005.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata] >KAG7017798.1 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543 bits (1400), Expect = 9.73e-195
Identity = 261/277 (94.22%), Postives = 273/277 (98.56%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MA+GILRRA++RVSA+SPSRF+RIRAHAS A+AQQV+QKAAAS++LKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CsGy3G024360.1 vs. NCBI nr
Match: XP_023527486.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542 bits (1396), Expect = 3.96e-194
Identity = 260/277 (93.86%), Postives = 272/277 (98.19%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MA+GILRRA++RVSA+SPSRF+RIRAHAS A+AQQV+QK AAS++LKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKVAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy TrEMBL
Match: A0A0A0LBZ3 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_3G595230 PE=3 SV=1)

HSP 1 Score: 569 bits (1467), Expect = 2.87e-205
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 551 bits (1419), Expect = 5.98e-198
Identity = 266/277 (96.03%), Postives = 273/277 (98.56%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MATGILRR LSRVSASSPSRF+RIRAHASEA+AQQV+QKA ASS+LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy TrEMBL
Match: A0A1S3BP14 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491745 PE=3 SV=1)

HSP 1 Score: 551 bits (1419), Expect = 5.98e-198
Identity = 266/277 (96.03%), Postives = 273/277 (98.56%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MATGILRR LSRVSASSPSRF+RIRAHASEA+AQQV+QKA ASS+LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 543 bits (1400), Expect = 4.71e-195
Identity = 261/277 (94.22%), Postives = 273/277 (98.56%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MA+GILRRA++RVSA+SPSRF+RIRAHAS A+AQQV+QKAAAS++LKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CsGy3G024360.1 vs. ExPASy TrEMBL
Match: A0A6J1J748 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481863 PE=3 SV=1)

HSP 1 Score: 540 bits (1392), Expect = 7.81e-194
Identity = 259/277 (93.50%), Postives = 272/277 (98.19%), Query Frame = 0 

Query: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60
           MA+GILRRA++RVSA+ PSRF+RIRAHA+ A+AQQV+QKAAAS++LKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELQEYKIDLKECGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180
           TKI SG SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+AIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277
           EFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]
BLAST of CsGy3G024360.1 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-129
Identity = 221/280 (78.93%), Postives = 242/280 (86.43%), Query Frame = 0 

Query: 1   MATGILRRALSRVSA--SSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDS 60
           MA G++ R +   S+  S+ +R +  R  ++ ++AQ         + LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPELQ+YKIDLK+CGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKISSGD-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180
           CLTKI SG   +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+A
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]
BLAST of CsGy3G024360.1 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 445.7 bits (1145), Expect = 2.8e-125
Identity = 215/278 (77.34%), Postives = 239/278 (85.97%), Query Frame = 0 

Query: 1   MATGILRRALSRVSA--SSPSRFLRIRAHASEAQAQ-QVDQKAAASSHLKTFAIYRWNPD 60
           MA+G++ R +    +  ++ +R +  R  ++ A+A+ +        S+LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKI-SSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 180
           ACLTKI      +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLD 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CsGy3G024360.1 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 445.7 bits (1145), Expect = 2.8e-125
Identity = 215/278 (77.34%), Postives = 239/278 (85.97%), Query Frame = 0 

Query: 1   MATGILRRALSRVSA--SSPSRFLRIRAHASEAQAQ-QVDQKAAASSHLKTFAIYRWNPD 60
           MA+G++ R +    +  ++ +R +  R  ++ A+A+ +        S+LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPELQ Y+IDLK+CGPMVLDALIKIKNE+DPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKI-SSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQ 180
           ACLTKI      +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+   VP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLD 240
           SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL+
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]
BLAST of CsGy3G024360.1 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 324.7 bits (831), Expect = 7.2e-89
Identity = 156/234 (66.67%), Postives = 178/234 (76.07%), Query Frame = 0 

Query: 47  KTFAIYRWNPDSP-SKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICG 106
           K F IYRWNPD P SKP LQ + +DL  CGPMVLD L KIK E D SL++RRSCREGICG
Sbjct: 67  KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICG 126

Query: 107 SCAMNIDGCNGLACLTKISSGDS--STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
           SC+MNIDG N +ACL  I+   S  + ITPLPHM+VIKDLVVD+TNFY QYKS+EPWLK 
Sbjct: 127 SCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKT 186

Query: 167 KSEPPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 226
           + +PP  G+E  QS KDR KLDG+YECILCACC+TSCPSYWWNPE + GPAALL A RWI
Sbjct: 187 R-KPPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWI 246

Query: 227 SDSRDEYTKERLDAIND-EFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLV 277
           SDSRDEY +ERL AI + E K+YRC  I NC   CPKGLNP   I  +K   L+
Sbjct: 247 SDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPASAILKMKSKHLL 299

The following BLAST results are available for this feature:
BLAST of CsGy3G024360.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LB023.4e-12878.93Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara... [more]
Q8LBZ73.9e-12477.34Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara... [more]
Q9S8271.2e-11774.19Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory... [more]
P219142.8e-9360.66Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Droso... [more]
Q6FWS83.6e-9367.66Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candi... [more]
BLAST of CsGy3G024360.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145686.15.93e-205100.00succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucum... [more]
XP_008450036.11.24e-19796.03PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochond... [more]
XP_038898422.15.87e-19696.01succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Benin... [more]
XP_022935005.19.73e-19594.22succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [... [more]
XP_023527486.13.96e-19493.86succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur... [more]
BLAST of CsGy3G024360.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBZ32.87e-205100.00Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
E5GCD75.98e-19896.03Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
A0A1S3BP145.98e-19896.03Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum... [more]
A0A6J1F9C74.71e-19594.22Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur... [more]
A0A6J1J7487.81e-19493.50Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur... [more]
BLAST of CsGy3G024360.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G40650.12.4e-12978.93succinate dehydrogenase 2-2 [more]
AT3G27380.12.8e-12577.34succinate dehydrogenase 2-1 [more]
AT3G27380.22.8e-12577.34succinate dehydrogenase 2-1 [more]
AT5G65165.17.2e-8966.67succinate dehydrogenase 2-3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 36..146
e-value: 7.0E-41
score: 140.6
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 48..151
e-value: 7.0E-33
score: 112.9
NoneNo IPR availablePFAMPF13534Fer4_17coord: 189..262
e-value: 2.7E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR11921:SF44SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIALcoord: 7..274
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 7..274
NoneNo IPR availableSUPERFAMILY46548alpha-helical ferredoxincoord: 147..272
IPR009051Alpha-helical ferredoxinGENE3D1.10.1060.10coord: 147..276
e-value: 4.6E-52
score: 177.3
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMTIGR00384TIGR00384coord: 51..271
e-value: 1.9E-84
score: 280.5
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 190..201
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 99..107
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 60..137
score: 9.698944
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 62..126
e-value: 0.00358811
score: 33.9076
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 180..210
score: 7.894782
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 45..146

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G024360CsGy3G024360gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G024360.1.exon1CsGy3G024360.1.exon1exon
CsGy3G024360.1.exon2CsGy3G024360.1.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy3G024360.1cds.CsGy3G024360.1CDS
cds.CsGy3G024360.1cds.CsGy3G024360.1_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G024360.1CsGy3G024360.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0022904 respiratory electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045273 respiratory chain complex II
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity