Cp4.1LG18g00580.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTTGTAGGTGATTGTGACACACTGCAACATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAGTTAGTATTTATTTTAAAATTTAATCTATGAACATTTGGCTTATGATATGACAATGCTTACTTAGCTTTCTCTGTGTGTTTTTGTATCTTTGTTTAATAGATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGGTACTTAAATTCTAGCTATGTTGTTTGTCAATGATATATTATACTGTTATTATGCATAAAATTGTCAACCCTCACCTATGATATTGTGGTATTGGTGAGATATTCATATTGATGTCCGAATGAATTTTGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCTGCTTCACGGGAAAGGACGTTAAGTAGAGGTTTGCTGTTTGACTTACTTTCTCTTCTTATGATAAACATGTGTAAACGACCTCGGTTCTTCAAAATTAACCAAGTATATCTGAGCTTTCTTATCCTGTATCAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAGTAAGGTTTCTTTTTCTCTGAGCCCTATGTATGTGATGTTTATATGTGCATATGTACTTATTGGATTGATGTTTCTTCACCTTTAAATTGTACTGAAGATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGTATGAGATTCCCCTTCCCTGAATTACAATTATTCCTGACATCTATTCAAGCTGATCATATATTTTATTTTTTTTGCATTGATGACAATTTAGATTTGATAATATGAGGCCATGCAAGGATTTTTTTTGTGAACAAGTTCTTTTGATACCCCCAAGAAGCTTGTCAGGAAATGAAAAGGCTATGCTTCTGAATGATATAATCTCATTGGGATTATCTATTTGAACCTCTTTTCTTAGTATGTTGTTCGATTGCTTTCCACAAAAAGTTATTTTCTGTTCATAATTACTGCCACCCATTATATCCATTCCCATGTGTCATTGTGTTCTTTATTTCTTAGATAGTTGCGAGTGTCCAAGTCAATTTATGCACAAGTTTTATGAGAAACCTTCTTAGGATTTATAATAATTGGCCTCGAAACATTCATCCAAACATTTAAATAGGTGGCTATGTGGTTTGAACCCATGATCGAATGACATTTGGATTTGCACTGTATCCCTTTGACTATTAGACCAATGTAGTTATCTTACTATGCCCACCTTTGAAATAGGCATTCTGCACTGTGTTAACGTATTTCGTAAGGATGTGAATAGATCCCGGTTTCGCAACTACCATTATAAGAGAATACAAGAAAAATGATACTGTCTAAGTTCTTTGTCAAAAATGAAAAATGATAGTGACCTAGGTATTTTGAAGAATCCAAAAGCTCCTTTGAGCCAAGCTCGTCACTAAGCTTTCACGATCATTATTTACCTCATTGCTACCCTTCCCTTATTTGTAGTTGTTGAATCTACTTACAGTTCGAGCATAAGAAACTAAATTTAGTAAAAGAGTTTCCTCTCTCCCTCTAATGCGAGTTGGAGAGGTTGGTGAAAATCCAAAGTAAAAGATTTGTGGCGAACTGTTTTAGTTGAAGATTTTTGCGTACTGAAGTCAATGATGGTGAAGCTTAGTTGGGAAACTTATCTTGAGGGATTGCCTCATTTTTCTCACTACTAGACTTAAGGTATAGAGATGTACTAGTTACAATCACATGCTTGATGACCAACATAAAGTTTTGTTTGACAATTTTCCTTTTTCTTGGATCAATCTAGATTGGAAGGTGTTTATGTAATAGTTGTTCTTGGTCAGGGCTCCTCGACCAATTTTTTTCTTTTATCTACTAAATATATGGTCTTTTGATTAAAAAAAGGTTAAAGAACATATTTTTCTTCGTACTTTCATTGAAGTAATGGTTTAATTCAAGAACTTCAATTAAGTATTTGAAATTTAATGTGTAATCATTTAATTCTTGTAGTTTAATTTAGTCCTTCAACTTTAGTAAATAACAAGTTAGTTCTTTTGGTTAAAATCTGGAATGATTTAGTCCCCTTTAATTTAAATTTTGTAACAATATAATCTCTACTATGAAAATTCTAAATTGTAGCAGGGTTTGTGGTGTTTATAGATTGATAAATCACTTGGGATCTGATGTGTTTTTTAAATTAGAGGGACTAAAATCAAGTAAAAGATAAGGTACTTCAACTCTATGAATTTTTTCATGAGGGACTAAATTTTTTAAAATTTTAAATAGGTGGGACTAAATCATGACATACTGTGAAGGGAGTTAATCGTAACAAATTTTAAGCTACAAGTACTAAATTGTTATGGATTAAAGTTCAAATACTAAATTGTTACCTATAAGAAAAAGGAAACTAAATTTTTACATCCATGAAAAATATAAGCGAGGAAGGAGGTGAAGATTGAGTTGGTAAGTGTCAACTTAGCCTGTTTTGGGACAAGGGTCTTCCATTTATCAGTTTTTGGTTGCACTTTATCGTTGATTTGATGCCAAAACGTTGTTTCGTTAGGATTTCATTAGAATTGAAGCCCTAGGCAAACCATTGGTCTACCACCCACTTTGCATCTGGATATTGTGTTTCAGTGGACATTTTGGAATATTTCTATTGAGACCCTTGTTCATAAATGCACATTGTTTATCAGCTCTCCCTATAGATGTGCATGGACACATGCATGTATCTTGGTGGACCAAAATTTTGTTGAATGATTATGATGAATGATGCACTAATATCAAACTTTTATTTTGTTATGTAGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTGTAAGGTTTCTCTTCCCTTAGTATATGTATTTTGATTTGTTGGTTTTTTCATAATTATTTTTTATTTTATTTTTATATATATTAGCATCGTTACACCTTTGAAGTTTTTTGCAGCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTGAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGATAAATTTACTCAATGTAAGTTTTTCATGTCACTTGAGTTGCAAGTTTATATGGCTTTTTCTTGTGTGAAGAAAAGGCAGACTCTAGTTGCTTTCATACATTAAAAAGGAAGAATACAACCTAATAAATAGAAGAAACTATTGATGTATAAAAGAAAATGAGCAATGGTAAAAACTATATTGATCAAGACAATTTAGATTTTCAGCTCCATAGGCTTTAGTGGAAATGTCAATAGCTTGTAAACGTGCTTCTTGATACAAAACGTGGGGGTTGTTGATTTATGCAAACCTTGGACTAGTGATGTGTTTGAATCTCCACTTTTACTTGGTTTTTACTATTAGTGAACCAATTTGCCAAGGTTTATCACTTTTTTTTTGCTTGATTATCTTATTTTTGACGGCATATAATTTTTTATTAAATTTATTTTTCACTATTTTGGTTGTTTTGATGTTAAATTTACATGTTTAATATATTTTCAAGTCCTAGATATTTAAATATATTTAAAAAATCATGCGTGCCCAATGTGTCCGCCTCATACCTTTTTTTTCAGAAATTAACATGTAATGCTATGTGTATTTGTATCCCATTTTAGCTCATTTTAGATTTAACATTTTGAGTACTGAGATGTCATAACCAAAATTGTTCCTAGGTTTGCTTGGAGGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGGTCTGGTATGGGGACCACCATATTTTCTATCAACTTCTTGTTGGTTCTTTTTGAAGTTGATTTTGGGTCCTAACGGTTCTTTCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACGTATCTGCACTTTCTCATGGTGTCAAGTGTTCCAAGTCTGACATTGTAAGTAATGTTGATTGTTCAGTGTTAATATTTCCTTTTGTACTTCTTTTTGATGAGGAACATTGTTTTTCAACTTGAAAGGTTACCAAATAGATTGTGCTTTTTTCCTTATCTTTTACTTATCAAATAAGGAACGAATATTTCTCTTACCTTTTGTTGTAGTATTTTCTGGTTCTATTGTCTAGGATTCATGTCAATCTTCAGCAATGTTCATTGTATATTTAAAATTTTTGTTACAAAATCATGTCAATGGAAATTTCAATGCCTTGAAAGACCAAAATAATAATAATAATAATAATAACAAAAAACTTCCTGAACTTCCCAAAAATTACTGAATTATCTCAAAGAATGATAGAAATTAGTGCTATCATGAAACAATGAGCAATGCTGTCTTTAACAAGAAAACTCCACTAATTAATACAACTACAATACTTCTTGGAAAAAGACTAAAATAATGACCTAGTTTTTTTTGTTTGTAGGGTTTCTTGAACTTGTTGAACATAGTTTTTTGTTGATCGGAAAGAGGTTCACCAACTACCTACACTATTGTCTTCTTAAAAAAGAAGTTGGTTTGGCCGTTGGATGCCATTTCGGATTTAGTTCTTAGCCTTCTTTCACACAAGGTTTCTAGGAGTTGGTAGTTCAGTTAGTTGTTTTGGGCACAAAATATTAGGAACCGAAAGGTGTCTTTGCTGAAATTATGAGACTCCAAGGCAATGTAAAGAAGTTAAACATTGTCATACTTCCCACTAATAAAGAAAGTTGGAAAGCCATGACATTTTTTTTTTTTTTTTATAGAGAGTATCAAGTATTTTCTCCCCTACCTAATGATGAAGCTCCTGAGTTATCAAGTATCAAGTTCCAAGTTTTTATCGAGTCTAAGATGTTTCACATTTTGATTTTGTTGGCAAAAATAGGAAAAGAAATAAACTTCAAACAACCCCACAACTCAGCTTTTCTTCAAGCATGTTGTGAATATTTTCGGAGTTCCCTCAAGTATTGTCAATTCTAGAGATAACTGATTTATGGGTACTTTCTGGACGAGGCCATTTTTGCTCTTGAGCCCAGTCTAAGTATATCTTTGAGTTACCATCCTCGATGGATGGCCATACCGAGAGATTCAACAGCTTACTTGAAGTTGCCACTTTGTCGATGCTTAACAAAAGAATTGGGTCTAGTTGTTAGACATTGCTCAGTTCTATTTTAACTGACCAACAGAAACAACCTAGTTATATGATAAAATGCATGTTGAATCTGCAATTTAGACTGTAAATTATTTATTGCGTTCTAATCATTTTTAACCAGAAACAAACTTCTCATTCTTACGTCAAAATTAAAATATCCCTGGTTAATTAACATTGTAATTTTTTTCTTATTTTGATATATTATTTGTTGCAGTCTTATATATGTTGTCCTAAATTTATTTCAGATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACAGAATCTGGCAGCTTAACGGTAACTGATTTGCTTTGAGATGGTCTTTACTATCACGTGGTGTATTATTGTTTAATACATGTTATCATTGATGCTAGCATTACACTATTTATAGTCATCAATATCCTTTTTGTTGATCTTATTTTCTTGTGAAGTTCTGTTTTACTTGAGAGAAACTTGTAATGCATTTGACGTGAAGCTAAGATTCTTTAACTTCGTGTAGTTGAGGATATATGGGATTGTGGTTGTGAAGAAGTGGTTTAGTTTTGTGTGATAAAGTACTTTATGGAGATTCTTGATGCAATGTATGTTTAGTTACTGCTTCCCAGTTCATTTCACTCTTAAGTCTTACCTTTCTTATGCTGTCAAACAGGAGTCTGATCTTTTCTACTCCATTGAAATTAGTTAAGTTATTTATGTTTATATTTTGAAAATGGATAAAGAATTATTTGTAACGGAAAAAAATGTCTCTACTGCTAGCTCAACATGATGAAATTTTTATTATGTATTTTTGTTTATACTATTATTTATCTATATATGGAAATGTATGTTATTTTATTCTTGTTCAAGCCTTTTCATGCACGTTGATCTTGGGGAATATCTTCCATCTGGAAATGCCTGATATTTCAAAGAAAAAAGAACACTAGAGTTGGTTGTATTGCCAAACATGTTTTTGCTGATGCCAATAGTTAATAAAATACCCAATTATATTCTAAGCTCGTAAATTTATTCTGCATGTCTTTTATTTTCAAACTAGGGTATAAACCTGAGTATTGATAAGGACTCCTTGATTATTTCCTTGTTTAGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGCAAGCAACTCTGAGCGCACTGATGGATCCAAAAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATGTGAGTTTCCTCTTTTTCCCATCCTGTAAAAAAGTGATACGTAAATTGTACTTCTTAAGATCTAGCTAATTTGGTGCAGTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATGTAATGTTTTCTTTAACAGAATTCTCTCTCTCTCTCTCTCCCTCCTTTTTTTCCCTTCTTTTTCTTCTGTTTCATCATCAAGAATTATGAATGATTTTCTTACTTCAGAAGGTCCTAATGACTCTAGTGCTATTGGTAAATTTTGGTGAATAAATATTTTTAAAAAGTTTGCTTGAATAAATTAATTCTATCTCAATAACTTAGCCTTTTAGACTAAGAGTAAATCACTTAAATATGAATTTAAATTTAGATATTTCTTCGTTTTAAAATTGATCGACCATATTTTCGGATTTTTTTTCTCAAGTAGAACAAGTAGGGTATGATGATTTTGAACCTCTGTCTCTAAGGACAAGAACACATGTCAATTACCTTGAGCTATGCTCACTTTGGCTTATCCTTGGAAGTTTTAAGACTACAAAGATTGTAAGTGGGCTTTATTTTTAAATAAATTGCATCTTATTAGTGGTGCCACTAGAAGATATTTAATGGTAGGCTTGTGAACCCACCAAGCAAGGTGCATCAATATCAATTGACCAGTGGGTAAGGCAAGTACTGAGTGAGGTTTGGAGGTGGCACGTGAAGGTCTAAGTTAGTGGGTTGTGTTGCAGTTGCACCGAAAGAGAGTAGATTGTCCCCCTATCAAAAGTAAGCAAAGGCAAATTATGTTTACAATCAAGCTGCTAAGTGCGAGCTTGACATAAGAGCCAAAAAAGGTTTTTATTTTTATTTTATTTTTAATTAAAGTGAATGAGGAAGTGAATGAGGTGCACTACAAACACAAGAGTAGAAACTGAAAATTGGGGTATTACAATAGAATTACATAAAATGAAATGAAAGCTAGTACGAAGTTTCATAATTGTAAAAGAACTCACTTTAGTTCTGATCTTCAAAGTATGCATGTAATTTGAATCGGTGATGTTATGGAAACATGGTTCTTTGGTTAGATATACTCGTTGAGATTCCACCCATTTACATCTCTCTTCAATGTTGTTCTTTTATAGATTGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGTTAGTTCTAAAGAAGAAGCTGAAGCAGCAAAAGGTAAGATGCAAAGCTCAACTTCATGATGCGTTGACAGTTGTTTTCAATTTCAGTCATGTATGTAATTTACCAAAGTGATAAAAAAAAAACCCAAGCCAAAAGAGTTGCAGAAGACTTCTCCAATTGGACAAAACTGATTCAATAGATTTCCTAATTAAAACGAGGAGATTAAGACCAGAGTAGCTAAGAAAATCATTAAGAAGTGCTGTTGTTTGTTTGTTCCTATAATCCTTTTCTCGTTGTCTGAGTGTAAAATGTTACTTGAAAAATTGATAATTCAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGGTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTTCTTTCTTTCTTCTTTTATTTTATTTTATTAAAGTTCATTTGCTATCAATATCTGCATAGAAGGTTGGAAAAAAATGTACCTTAGTTTATAGACCAAAAAATTAAAACGTAACTACTTTCTAGAGGAATGAGTGTCATTCGTGGCAACTCCGAGTGCCTGTTTGTGAAAATTGAAGCTTATTATATATTATCCATCGCGCCGACTCAATACCTAGCACTCTATGCGCAATGTAGAAGGAAATGCAAGAAAATGTGCCTGTGGATGCACTATATTGTGATGCTATAGTTTTACTTTACATTTTAATTCTTCATTTGGAGATCAGGTGTATCTATCTATGTTAAGACTTTCCTGTCAACATTACCTATGATCTTTTATCTTAATTAACTTGATCTATCATTCTATCATTTTGTTTAACTTAGATTGGAATACTTTTTTATAGGAACGAAAGGTTATCTGTTTCTTATCTGTTTCTATAATTCTGTTGTAGTTGCTAGACATTTTCTTTTCAGATTCTGTGTGTGGGACAACTTTTTCAGTGCTTGGATTTTTCTGGGTTAAGTCGATACTTGGAAGTTCTGGGGGGCATATAAGGGTTTTGCTTTTTGGTGGATACTTTCTTCCTTATTCCACAAGAATTGAATATTGAGTGCCCACAAGCACACTTGATTATGATGTATACATACTGTTCAATTTTGTGTCCTCTTGAAATAACTGATCTTATATGTATTGAATTTTTCAATATTTTTGTCTTCATTATAAGACTTAATGGATTAGCACTCAAATGACAATATATTGCATAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGTACATATTTTCATTCATTACAAGCCAATTCGTTGTTGATATCTGTAGCCTATTCATACTTTTTACAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGTTTCTGTCTTTATTTCTCTCACGTTTGCCATTCACTTATTCATCTTTGTACTCCTACTGATTTTTTTAATATAGAAGAGGACATTGCATCTTTGTTCTCTTGTCTTAATCTCTTAGCCAGAGTTTTTATTTTGATTCTTGATTCTTATTTGCAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCCCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGGTCTTACTTCAAATCATAAATTCATTTCTTAGTTCTTAGCTTATCAGAACATTGGCAGAGTTTGTTCTGATTTAATTGAAAGTGGTGTTTTCTTTGCTATTTCTGTGCAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGACGAATCTGTATGTTTATATTGCACCTTTTTATTTCACTAATAGTCAAAATATATATACATACATACATTTGGTCTGCATTCTTCCAACATGGGTTTTCCACATTACAATTTAATATATTACATAAACAATGAACAAACACGGTAAGAAGAGGGAAACGGGAATAAAACTAAAGAGGAGTTGTGACATTCCTAAGCGTAACTCAACTTGTTTAGATATATGTTCTTGACCAAGAGGTTCAATTCCGTCCTAGTTACTGATCCTTCTCGAGATAGGCTCTCTTTAGCCTCACCTCTTCCTGTACCTCTAATAGGGAGTCGTCTCCTTCTTCATCTTCCTCTTCCACGTCCTCTAGGCGGCACAAAATATCTACTAACCTGAGCGTAACTCAACTTGTTTAGATATGTCTTTGACCAAGAAGTTCAATTCTCTCAACTCCACATGTTAAACTAAAAAAAAAAAAACGAACAAAACCTTTTCTCTAGCGAATTTTGTGAAGTAATAATTATCCAAGCTTACACTACTCCCTCTATCCCAACAAAACAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAANAAAAAAAAATGGTAACATGTTTGTTCATCATCACCCGAACAAATGAGGAAATCACAGACTTGCTCTATACATATATTTTTTTGTGAATTAGGCTAAATATCTTTCATCTTGAGGTTTAGTGTTCTTATTGCTGATTTCCAAACATGGAACTTTTAGTAAATTCTTCAGTAAAACAAGGCAATTCTCTATCATAATAACTTTCTTGTCATGGCTATGGATTTCTTCATTAATTGATATTGTACTGTGATCTACATTGCAGGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAAGAGGCTGGAGAGACCGACAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGCTCAAACATGGTGAACAGGAACAGGAGAATGATTATGATGGTGATGGTACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATACGATTGATACCGATATCTCAGGCGTTCAAGATTGCGGGCTAGTGTTGGCTGTCGTTAGTTATAGTTGATCTTATATTCATTGGCTGCTATGTGTTCTATCATATGAACATTAAGCATGCAACTTGCATTATCTTTAATTTTGCTGTCCCATTTGTTTTAATCTCATTTCATAAGGTTTTGTGAGGAAATAGATAAGTTAACACAATTGTAACCTAATGAAAAATATCGAAAAAATGTTTCATAAGGTTTTGCGAGGAAATAATGATACTATAATTTTTCAAAAT CGTTGTAGGTGATTGTGACACACTGCAACATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCTGCTTCACGGGAAAGGACGTTAAGTAGAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTGAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGATAAATTTACTCAATGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACGTATCTGCACTTTCTCATGGTGTCAAGTGTTCCAAGTCTGACATTATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACAGAATCTGGCAGCTTAACGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGCAAGCAACTCTGAGCGCACTGATGGATCCAAAAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATATTGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGTTAGTTCTAAAGAAGAAGCTGAAGCAGCAAAAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGGTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCCCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGACGAATCTGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAAGAGGCTGGAGAGACCGACAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGCTCAAACATGGTGAACAGGAACAGGAGAATGATTATGATGGTGATGGTACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATACGATTGATACCGATATCTCAGGCGTTCAAGATTGCGGGCTAGTGTTGGCTGTCGTTAGTTATAGTTGATCTTATATTCATTGGCTGCTATGTGTTCTATCATATGAACATTAAGCATGCAACTTGCATTATCTTTAATTTTGCTGTCCCATTTGTTTTAATCTCATTTCATAAGGTTTTGTGAGGAAATAGATAAGTTAACACAATTGTAACCTAATGAAAAATATCGAAAAAATGTTTCATAAGGTTTTGCGAGGAAATAATGATACTATAATTTTTCAAAAT ATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACGTATCTGCACTTTCTCATGGTGTCAAGTGTTCCAAGTCTGACATTATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACAGAATCTGGCAGCTTAACGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGCAAGCAACTCTGAGCGCACTGATGGATCCAAAAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATATTGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGTTAGTTCTAAAGAAGAAGCTGAAGCAGCAAAAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGGTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCCCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGACGAATCTGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAAGAGGCTGGAGAGACCGACAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGCTCAAACATGGTGAACAGGAACAGGAGAATGATTATGATGGTGATGGTACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATACGATTGA MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD Homology
BLAST of Cp4.1LG18g00580.1 vs. ExPASy Swiss-Prot
Match: Q92994 (Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.2e-26 Identity = 117/394 (29.70%), Postives = 171/394 (43.40%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy Swiss-Prot
Match: Q8CFK2 (Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 6.8e-25 Identity = 113/388 (29.12%), Postives = 174/388 (44.85%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy Swiss-Prot
Match: Q9P6R0 (Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brf1 PE=1 SV=2) HSP 1 Score: 101.3 bits (251), Expect = 2.9e-20 Identity = 92/376 (24.47%), Postives = 167/376 (44.41%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy Swiss-Prot
Match: P46070 (Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TDS4 PE=3 SV=2) HSP 1 Score: 74.7 bits (182), Expect = 2.9e-12 Identity = 98/380 (25.79%), Postives = 173/380 (45.53%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy Swiss-Prot
Match: P29056 (Transcription factor IIIB 70 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BRF1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.1e-11 Identity = 100/424 (23.58%), Postives = 176/424 (41.51%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. NCBI nr
Match: XP_023515936.1 (transcription factor IIIB 90 kDa subunit-like [Cucurbita pepo subsp. pepo] >XP_023515937.1 transcription factor IIIB 90 kDa subunit-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 848 bits (2192), Expect = 1.50e-306 Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. NCBI nr
Match: KAG7023971.1 (Transcription factor IIIB 90 kDa subunit [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 837 bits (2163), Expect = 3.88e-302 Identity = 441/448 (98.44%), Postives = 442/448 (98.66%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. NCBI nr
Match: XP_022961526.1 (transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961527.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961529.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961530.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata]) HSP 1 Score: 827 bits (2137), Expect = 3.38e-298 Identity = 439/448 (97.99%), Postives = 441/448 (98.44%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. NCBI nr
Match: XP_022968688.1 (transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968689.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968690.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968691.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima]) HSP 1 Score: 823 bits (2126), Expect = 1.66e-296 Identity = 438/449 (97.55%), Postives = 441/449 (98.22%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. NCBI nr
Match: KAG6590424.1 (Transcription factor IIIB 90 kDa subunit, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 823 bits (2127), Expect = 1.56e-295 Identity = 439/451 (97.34%), Postives = 441/451 (97.78%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy TrEMBL
Match: A0A6J1HAL7 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111462077 PE=3 SV=1) HSP 1 Score: 827 bits (2137), Expect = 1.64e-298 Identity = 439/448 (97.99%), Postives = 441/448 (98.44%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy TrEMBL
Match: A0A6J1HVK9 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111467855 PE=3 SV=1) HSP 1 Score: 823 bits (2126), Expect = 8.02e-297 Identity = 438/449 (97.55%), Postives = 441/449 (98.22%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy TrEMBL
Match: A0A6J1F4S8 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111440829 PE=3 SV=1) HSP 1 Score: 665 bits (1715), Expect = 1.36e-234 Identity = 363/450 (80.67%), Postives = 391/450 (86.89%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy TrEMBL
Match: A0A6J1HZP4 (transcription factor IIIB 90 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111469566 PE=3 SV=1) HSP 1 Score: 662 bits (1709), Expect = 1.15e-233 Identity = 362/450 (80.44%), Postives = 390/450 (86.67%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. ExPASy TrEMBL
Match: A0A1S3BQV3 (transcription factor IIIB 60 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103492209 PE=3 SV=1) HSP 1 Score: 654 bits (1686), Expect = 4.10e-230 Identity = 361/450 (80.22%), Postives = 397/450 (88.22%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. TAIR 10
Match: AT3G09360.1 (Cyclin/Brf1-like TBP-binding protein ) HSP 1 Score: 315.5 bits (807), Expect = 7.0e-86 Identity = 205/452 (45.35%), Postives = 282/452 (62.39%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. TAIR 10
Match: AT2G01280.1 (Cyclin/Brf1-like TBP-binding protein ) HSP 1 Score: 226.1 bits (575), Expect = 5.6e-59 Identity = 176/441 (39.91%), Postives = 248/441 (56.24%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. TAIR 10
Match: AT2G45100.1 (Cyclin/Brf1-like TBP-binding protein ) HSP 1 Score: 214.2 bits (544), Expect = 2.2e-55 Identity = 169/439 (38.50%), Postives = 229/439 (52.16%), Query Frame = 0
BLAST of Cp4.1LG18g00580.1 vs. TAIR 10
Match: AT1G30455.1 (transcription regulators;translation initiation factors;zinc ion binding;transcription activators ) HSP 1 Score: 76.3 bits (186), Expect = 7.2e-14 Identity = 107/403 (26.55%), Postives = 145/403 (35.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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