Cp4.1LG18g00580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g00580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor IIIB 60 kDa subunit-like
Location	Cp4.1LG18: 1194155 .. 1205289 (-)
RNA-Seq Expression	Cp4.1LG18g00580
Synteny	Cp4.1LG18g00580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTGTAGGTGATTGTGACACACTGCAACATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAGTTAGTATTTATTTTAAAATTTAATCTATGAACATTTGGCTTATGATATGACAATGCTTACTTAGCTTTCTCTGTGTGTTTTTGTATCTTTGTTTAATAGATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGGTACTTAAATTCTAGCTATGTTGTTTGTCAATGATATATTATACTGTTATTATGCATAAAATTGTCAACCCTCACCTATGATATTGTGGTATTGGTGAGATATTCATATTGATGTCCGAATGAATTTTGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCTGCTTCACGGGAAAGGACGTTAAGTAGAGGTTTGCTGTTTGACTTACTTTCTCTTCTTATGATAAACATGTGTAAACGACCTCGGTTCTTCAAAATTAACCAAGTATATCTGAGCTTTCTTATCCTGTATCAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAGTAAGGTTTCTTTTTCTCTGAGCCCTATGTATGTGATGTTTATATGTGCATATGTACTTATTGGATTGATGTTTCTTCACCTTTAAATTGTACTGAAGATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGTATGAGATTCCCCTTCCCTGAATTACAATTATTCCTGACATCTATTCAAGCTGATCATATATTTTATTTTTTTTGCATTGATGACAATTTAGATTTGATAATATGAGGCCATGCAAGGATTTTTTTTGTGAACAAGTTCTTTTGATACCCCCAAGAAGCTTGTCAGGAAATGAAAAGGCTATGCTTCTGAATGATATAATCTCATTGGGATTATCTATTTGAACCTCTTTTCTTAGTATGTTGTTCGATTGCTTTCCACAAAAAGTTATTTTCTGTTCATAATTACTGCCACCCATTATATCCATTCCCATGTGTCATTGTGTTCTTTATTTCTTAGATAGTTGCGAGTGTCCAAGTCAATTTATGCACAAGTTTTATGAGAAACCTTCTTAGGATTTATAATAATTGGCCTCGAAACATTCATCCAAACATTTAAATAGGTGGCTATGTGGTTTGAACCCATGATCGAATGACATTTGGATTTGCACTGTATCCCTTTGACTATTAGACCAATGTAGTTATCTTACTATGCCCACCTTTGAAATAGGCATTCTGCACTGTGTTAACGTATTTCGTAAGGATGTGAATAGATCCCGGTTTCGCAACTACCATTATAAGAGAATACAAGAAAAATGATACTGTCTAAGTTCTTTGTCAAAAATGAAAAATGATAGTGACCTAGGTATTTTGAAGAATCCAAAAGCTCCTTTGAGCCAAGCTCGTCACTAAGCTTTCACGATCATTATTTACCTCATTGCTACCCTTCCCTTATTTGTAGTTGTTGAATCTACTTACAGTTCGAGCATAAGAAACTAAATTTAGTAAAAGAGTTTCCTCTCTCCCTCTAATGCGAGTTGGAGAGGTTGGTGAAAATCCAAAGTAAAAGATTTGTGGCGAACTGTTTTAGTTGAAGATTTTTGCGTACTGAAGTCAATGATGGTGAAGCTTAGTTGGGAAACTTATCTTGAGGGATTGCCTCATTTTTCTCACTACTAGACTTAAGGTATAGAGATGTACTAGTTACAATCACATGCTTGATGACCAACATAAAGTTTTGTTTGACAATTTTCCTTTTTCTTGGATCAATCTAGATTGGAAGGTGTTTATGTAATAGTTGTTCTTGGTCAGGGCTCCTCGACCAATTTTTTTCTTTTATCTACTAAATATATGGTCTTTTGATTAAAAAAAGGTTAAAGAACATATTTTTCTTCGTACTTTCATTGAAGTAATGGTTTAATTCAAGAACTTCAATTAAGTATTTGAAATTTAATGTGTAATCATTTAATTCTTGTAGTTTAATTTAGTCCTTCAACTTTAGTAAATAACAAGTTAGTTCTTTTGGTTAAAATCTGGAATGATTTAGTCCCCTTTAATTTAAATTTTGTAACAATATAATCTCTACTATGAAAATTCTAAATTGTAGCAGGGTTTGTGGTGTTTATAGATTGATAAATCACTTGGGATCTGATGTGTTTTTTAAATTAGAGGGACTAAAATCAAGTAAAAGATAAGGTACTTCAACTCTATGAATTTTTTCATGAGGGACTAAATTTTTTAAAATTTTAAATAGGTGGGACTAAATCATGACATACTGTGAAGGGAGTTAATCGTAACAAATTTTAAGCTACAAGTACTAAATTGTTATGGATTAAAGTTCAAATACTAAATTGTTACCTATAAGAAAAAGGAAACTAAATTTTTACATCCATGAAAAATATAAGCGAGGAAGGAGGTGAAGATTGAGTTGGTAAGTGTCAACTTAGCCTGTTTTGGGACAAGGGTCTTCCATTTATCAGTTTTTGGTTGCACTTTATCGTTGATTTGATGCCAAAACGTTGTTTCGTTAGGATTTCATTAGAATTGAAGCCCTAGGCAAACCATTGGTCTACCACCCACTTTGCATCTGGATATTGTGTTTCAGTGGACATTTTGGAATATTTCTATTGAGACCCTTGTTCATAAATGCACATTGTTTATCAGCTCTCCCTATAGATGTGCATGGACACATGCATGTATCTTGGTGGACCAAAATTTTGTTGAATGATTATGATGAATGATGCACTAATATCAAACTTTTATTTTGTTATGTAGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTGTAAGGTTTCTCTTCCCTTAGTATATGTATTTTGATTTGTTGGTTTTTTCATAATTATTTTTTATTTTATTTTTATATATATTAGCATCGTTACACCTTTGAAGTTTTTTGCAGCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTGAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGATAAATTTACTCAATGTAAGTTTTTCATGTCACTTGAGTTGCAAGTTTATATGGCTTTTTCTTGTGTGAAGAAAAGGCAGACTCTAGTTGCTTTCATACATTAAAAAGGAAGAATACAACCTAATAAATAGAAGAAACTATTGATGTATAAAAGAAAATGAGCAATGGTAAAAACTATATTGATCAAGACAATTTAGATTTTCAGCTCCATAGGCTTTAGTGGAAATGTCAATAGCTTGTAAACGTGCTTCTTGATACAAAACGTGGGGGTTGTTGATTTATGCAAACCTTGGACTAGTGATGTGTTTGAATCTCCACTTTTACTTGGTTTTTACTATTAGTGAACCAATTTGCCAAGGTTTATCACTTTTTTTTTGCTTGATTATCTTATTTTTGACGGCATATAATTTTTTATTAAATTTATTTTTCACTATTTTGGTTGTTTTGATGTTAAATTTACATGTTTAATATATTTTCAAGTCCTAGATATTTAAATATATTTAAAAAATCATGCGTGCCCAATGTGTCCGCCTCATACCTTTTTTTTCAGAAATTAACATGTAATGCTATGTGTATTTGTATCCCATTTTAGCTCATTTTAGATTTAACATTTTGAGTACTGAGATGTCATAACCAAAATTGTTCCTAGGTTTGCTTGGAGGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGGTCTGGTATGGGGACCACCATATTTTCTATCAACTTCTTGTTGGTTCTTTTTGAAGTTGATTTTGGGTCCTAACGGTTCTTTCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACGTATCTGCACTTTCTCATGGTGTCAAGTGTTCCAAGTCTGACATTGTAAGTAATGTTGATTGTTCAGTGTTAATATTTCCTTTTGTACTTCTTTTTGATGAGGAACATTGTTTTTCAACTTGAAAGGTTACCAAATAGATTGTGCTTTTTTCCTTATCTTTTACTTATCAAATAAGGAACGAATATTTCTCTTACCTTTTGTTGTAGTATTTTCTGGTTCTATTGTCTAGGATTCATGTCAATCTTCAGCAATGTTCATTGTATATTTAAAATTTTTGTTACAAAATCATGTCAATGGAAATTTCAATGCCTTGAAAGACCAAAATAATAATAATAATAATAATAACAAAAAACTTCCTGAACTTCCCAAAAATTACTGAATTATCTCAAAGAATGATAGAAATTAGTGCTATCATGAAACAATGAGCAATGCTGTCTTTAACAAGAAAACTCCACTAATTAATACAACTACAATACTTCTTGGAAAAAGACTAAAATAATGACCTAGTTTTTTTTGTTTGTAGGGTTTCTTGAACTTGTTGAACATAGTTTTTTGTTGATCGGAAAGAGGTTCACCAACTACCTACACTATTGTCTTCTTAAAAAAGAAGTTGGTTTGGCCGTTGGATGCCATTTCGGATTTAGTTCTTAGCCTTCTTTCACACAAGGTTTCTAGGAGTTGGTAGTTCAGTTAGTTGTTTTGGGCACAAAATATTAGGAACCGAAAGGTGTCTTTGCTGAAATTATGAGACTCCAAGGCAATGTAAAGAAGTTAAACATTGTCATACTTCCCACTAATAAAGAAAGTTGGAAAGCCATGACATTTTTTTTTTTTTTTTATAGAGAGTATCAAGTATTTTCTCCCCTACCTAATGATGAAGCTCCTGAGTTATCAAGTATCAAGTTCCAAGTTTTTATCGAGTCTAAGATGTTTCACATTTTGATTTTGTTGGCAAAAATAGGAAAAGAAATAAACTTCAAACAACCCCACAACTCAGCTTTTCTTCAAGCATGTTGTGAATATTTTCGGAGTTCCCTCAAGTATTGTCAATTCTAGAGATAACTGATTTATGGGTACTTTCTGGACGAGGCCATTTTTGCTCTTGAGCCCAGTCTAAGTATATCTTTGAGTTACCATCCTCGATGGATGGCCATACCGAGAGATTCAACAGCTTACTTGAAGTTGCCACTTTGTCGATGCTTAACAAAAGAATTGGGTCTAGTTGTTAGACATTGCTCAGTTCTATTTTAACTGACCAACAGAAACAACCTAGTTATATGATAAAATGCATGTTGAATCTGCAATTTAGACTGTAAATTATTTATTGCGTTCTAATCATTTTTAACCAGAAACAAACTTCTCATTCTTACGTCAAAATTAAAATATCCCTGGTTAATTAACATTGTAATTTTTTTCTTATTTTGATATATTATTTGTTGCAGTCTTATATATGTTGTCCTAAATTTATTTCAGATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACAGAATCTGGCAGCTTAACGGTAACTGATTTGCTTTGAGATGGTCTTTACTATCACGTGGTGTATTATTGTTTAATACATGTTATCATTGATGCTAGCATTACACTATTTATAGTCATCAATATCCTTTTTGTTGATCTTATTTTCTTGTGAAGTTCTGTTTTACTTGAGAGAAACTTGTAATGCATTTGACGTGAAGCTAAGATTCTTTAACTTCGTGTAGTTGAGGATATATGGGATTGTGGTTGTGAAGAAGTGGTTTAGTTTTGTGTGATAAAGTACTTTATGGAGATTCTTGATGCAATGTATGTTTAGTTACTGCTTCCCAGTTCATTTCACTCTTAAGTCTTACCTTTCTTATGCTGTCAAACAGGAGTCTGATCTTTTCTACTCCATTGAAATTAGTTAAGTTATTTATGTTTATATTTTGAAAATGGATAAAGAATTATTTGTAACGGAAAAAAATGTCTCTACTGCTAGCTCAACATGATGAAATTTTTATTATGTATTTTTGTTTATACTATTATTTATCTATATATGGAAATGTATGTTATTTTATTCTTGTTCAAGCCTTTTCATGCACGTTGATCTTGGGGAATATCTTCCATCTGGAAATGCCTGATATTTCAAAGAAAAAAGAACACTAGAGTTGGTTGTATTGCCAAACATGTTTTTGCTGATGCCAATAGTTAATAAAATACCCAATTATATTCTAAGCTCGTAAATTTATTCTGCATGTCTTTTATTTTCAAACTAGGGTATAAACCTGAGTATTGATAAGGACTCCTTGATTATTTCCTTGTTTAGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGCAAGCAACTCTGAGCGCACTGATGGATCCAAAAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATGTGAGTTTCCTCTTTTTCCCATCCTGTAAAAAAGTGATACGTAAATTGTACTTCTTAAGATCTAGCTAATTTGGTGCAGTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATGTAATGTTTTCTTTAACAGAATTCTCTCTCTCTCTCTCTCCCTCCTTTTTTTCCCTTCTTTTTCTTCTGTTTCATCATCAAGAATTATGAATGATTTTCTTACTTCAGAAGGTCCTAATGACTCTAGTGCTATTGGTAAATTTTGGTGAATAAATATTTTTAAAAAGTTTGCTTGAATAAATTAATTCTATCTCAATAACTTAGCCTTTTAGACTAAGAGTAAATCACTTAAATATGAATTTAAATTTAGATATTTCTTCGTTTTAAAATTGATCGACCATATTTTCGGATTTTTTTTCTCAAGTAGAACAAGTAGGGTATGATGATTTTGAACCTCTGTCTCTAAGGACAAGAACACATGTCAATTACCTTGAGCTATGCTCACTTTGGCTTATCCTTGGAAGTTTTAAGACTACAAAGATTGTAAGTGGGCTTTATTTTTAAATAAATTGCATCTTATTAGTGGTGCCACTAGAAGATATTTAATGGTAGGCTTGTGAACCCACCAAGCAAGGTGCATCAATATCAATTGACCAGTGGGTAAGGCAAGTACTGAGTGAGGTTTGGAGGTGGCACGTGAAGGTCTAAGTTAGTGGGTTGTGTTGCAGTTGCACCGAAAGAGAGTAGATTGTCCCCCTATCAAAAGTAAGCAAAGGCAAATTATGTTTACAATCAAGCTGCTAAGTGCGAGCTTGACATAAGAGCCAAAAAAGGTTTTTATTTTTATTTTATTTTTAATTAAAGTGAATGAGGAAGTGAATGAGGTGCACTACAAACACAAGAGTAGAAACTGAAAATTGGGGTATTACAATAGAATTACATAAAATGAAATGAAAGCTAGTACGAAGTTTCATAATTGTAAAAGAACTCACTTTAGTTCTGATCTTCAAAGTATGCATGTAATTTGAATCGGTGATGTTATGGAAACATGGTTCTTTGGTTAGATATACTCGTTGAGATTCCACCCATTTACATCTCTCTTCAATGTTGTTCTTTTATAGATTGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGTTAGTTCTAAAGAAGAAGCTGAAGCAGCAAAAGGTAAGATGCAAAGCTCAACTTCATGATGCGTTGACAGTTGTTTTCAATTTCAGTCATGTATGTAATTTACCAAAGTGATAAAAAAAAAACCCAAGCCAAAAGAGTTGCAGAAGACTTCTCCAATTGGACAAAACTGATTCAATAGATTTCCTAATTAAAACGAGGAGATTAAGACCAGAGTAGCTAAGAAAATCATTAAGAAGTGCTGTTGTTTGTTTGTTCCTATAATCCTTTTCTCGTTGTCTGAGTGTAAAATGTTACTTGAAAAATTGATAATTCAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGGTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTTCTTTCTTTCTTCTTTTATTTTATTTTATTAAAGTTCATTTGCTATCAATATCTGCATAGAAGGTTGGAAAAAAATGTACCTTAGTTTATAGACCAAAAAATTAAAACGTAACTACTTTCTAGAGGAATGAGTGTCATTCGTGGCAACTCCGAGTGCCTGTTTGTGAAAATTGAAGCTTATTATATATTATCCATCGCGCCGACTCAATACCTAGCACTCTATGCGCAATGTAGAAGGAAATGCAAGAAAATGTGCCTGTGGATGCACTATATTGTGATGCTATAGTTTTACTTTACATTTTAATTCTTCATTTGGAGATCAGGTGTATCTATCTATGTTAAGACTTTCCTGTCAACATTACCTATGATCTTTTATCTTAATTAACTTGATCTATCATTCTATCATTTTGTTTAACTTAGATTGGAATACTTTTTTATAGGAACGAAAGGTTATCTGTTTCTTATCTGTTTCTATAATTCTGTTGTAGTTGCTAGACATTTTCTTTTCAGATTCTGTGTGTGGGACAACTTTTTCAGTGCTTGGATTTTTCTGGGTTAAGTCGATACTTGGAAGTTCTGGGGGGCATATAAGGGTTTTGCTTTTTGGTGGATACTTTCTTCCTTATTCCACAAGAATTGAATATTGAGTGCCCACAAGCACACTTGATTATGATGTATACATACTGTTCAATTTTGTGTCCTCTTGAAATAACTGATCTTATATGTATTGAATTTTTCAATATTTTTGTCTTCATTATAAGACTTAATGGATTAGCACTCAAATGACAATATATTGCATAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGTACATATTTTCATTCATTACAAGCCAATTCGTTGTTGATATCTGTAGCCTATTCATACTTTTTACAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGTTTCTGTCTTTATTTCTCTCACGTTTGCCATTCACTTATTCATCTTTGTACTCCTACTGATTTTTTTAATATAGAAGAGGACATTGCATCTTTGTTCTCTTGTCTTAATCTCTTAGCCAGAGTTTTTATTTTGATTCTTGATTCTTATTTGCAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCCCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGGTCTTACTTCAAATCATAAATTCATTTCTTAGTTCTTAGCTTATCAGAACATTGGCAGAGTTTGTTCTGATTTAATTGAAAGTGGTGTTTTCTTTGCTATTTCTGTGCAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGACGAATCTGTATGTTTATATTGCACCTTTTTATTTCACTAATAGTCAAAATATATATACATACATACATTTGGTCTGCATTCTTCCAACATGGGTTTTCCACATTACAATTTAATATATTACATAAACAATGAACAAACACGGTAAGAAGAGGGAAACGGGAATAAAACTAAAGAGGAGTTGTGACATTCCTAAGCGTAACTCAACTTGTTTAGATATATGTTCTTGACCAAGAGGTTCAATTCCGTCCTAGTTACTGATCCTTCTCGAGATAGGCTCTCTTTAGCCTCACCTCTTCCTGTACCTCTAATAGGGAGTCGTCTCCTTCTTCATCTTCCTCTTCCACGTCCTCTAGGCGGCACAAAATATCTACTAACCTGAGCGTAACTCAACTTGTTTAGATATGTCTTTGACCAAGAAGTTCAATTCTCTCAACTCCACATGTTAAACTAAAAAAAAAAAAACGAACAAAACCTTTTCTCTAGCGAATTTTGTGAAGTAATAATTATCCAAGCTTACACTACTCCCTCTATCCCAACAAAACAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAANAAAAAAAAATGGTAACATGTTTGTTCATCATCACCCGAACAAATGAGGAAATCACAGACTTGCTCTATACATATATTTTTTTGTGAATTAGGCTAAATATCTTTCATCTTGAGGTTTAGTGTTCTTATTGCTGATTTCCAAACATGGAACTTTTAGTAAATTCTTCAGTAAAACAAGGCAATTCTCTATCATAATAACTTTCTTGTCATGGCTATGGATTTCTTCATTAATTGATATTGTACTGTGATCTACATTGCAGGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAAGAGGCTGGAGAGACCGACAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGCTCAAACATGGTGAACAGGAACAGGAGAATGATTATGATGGTGATGGTACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATACGATTGATACCGATATCTCAGGCGTTCAAGATTGCGGGCTAGTGTTGGCTGTCGTTAGTTATAGTTGATCTTATATTCATTGGCTGCTATGTGTTCTATCATATGAACATTAAGCATGCAACTTGCATTATCTTTAATTTTGCTGTCCCATTTGTTTTAATCTCATTTCATAAGGTTTTGTGAGGAAATAGATAAGTTAACACAATTGTAACCTAATGAAAAATATCGAAAAAATGTTTCATAAGGTTTTGCGAGGAAATAATGATACTATAATTTTTCAAAAT

mRNA sequence

CGTTGTAGGTGATTGTGACACACTGCAACATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCTGCTTCACGGGAAAGGACGTTAAGTAGAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTGAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGATAAATTTACTCAATGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACGTATCTGCACTTTCTCATGGTGTCAAGTGTTCCAAGTCTGACATTATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACAGAATCTGGCAGCTTAACGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGCAAGCAACTCTGAGCGCACTGATGGATCCAAAAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATATTGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGTTAGTTCTAAAGAAGAAGCTGAAGCAGCAAAAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGGTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCCCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGACGAATCTGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAAGAGGCTGGAGAGACCGACAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGCTCAAACATGGTGAACAGGAACAGGAGAATGATTATGATGGTGATGGTACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATACGATTGATACCGATATCTCAGGCGTTCAAGATTGCGGGCTAGTGTTGGCTGTCGTTAGTTATAGTTGATCTTATATTCATTGGCTGCTATGTGTTCTATCATATGAACATTAAGCATGCAACTTGCATTATCTTTAATTTTGCTGTCCCATTTGTTTTAATCTCATTTCATAAGGTTTTGTGAGGAAATAGATAAGTTAACACAATTGTAACCTAATGAAAAATATCGAAAAAATGTTTCATAAGGTTTTGCGAGGAAATAATGATACTATAATTTTTCAAAAT

Coding sequence (CDS)

ATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACGTATCTGCACTTTCTCATGGTGTCAAGTGTTCCAAGTCTGACATTATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACAGAATCTGGCAGCTTAACGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGCAAGCAACTCTGAGCGCACTGATGGATCCAAAAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATATTGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGTTAGTTCTAAAGAAGAAGCTGAAGCAGCAAAAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGGTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCCCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGACGAATCTGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAAGAGGCTGGAGAGACCGACAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGCTCAAACATGGTGAACAGGAACAGGAGAATGATTATGATGGTGATGGTACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATACGATTGA

Protein sequence

MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD

Homology

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BLAST of Cp4.1LG18g00580 vs. ExPASy Swiss-Prot
Match: Q92994 (Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-26
Identity = 117/394 (29.70%), Postives = 171/394 (43.40%), Query Frame = 0


Query: 4   EVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLT 63
           EVS TAL+++  MKRDWM TGR+PSGLCGAAL V+A  H  + +  ++I +V +C++TL 
Sbjct: 202 EVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLR 261

Query: 64  KRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPY 123
           KRL EFE+T +  LT++EF+ +  + +      T G +       ++VL     +     
Sbjct: 262 KRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEI 321

Query: 124 ALGLCRICYDDFVEL---------SGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAI 183
           +       Y D +E+          GGL   A     +    E  A  +  E   +   +
Sbjct: 322 S------SYQDAIEIELENSRPKAKGGLASLA-----KDGSTEDTASSLCGEEDTEDEEL 381

Query: 184 GKFSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLG-DDG 243
              +  LN   ++ +EL  L  A  S   +   E      A     +       LG  D 
Sbjct: 382 EAAASHLN--KDLYREL--LGGAPGSSEAAGSPEWGGRPPALGSLLDPLPTAASLGISDS 441

Query: 244 LRTCASDESESWSD-----------IDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQA 303
           +R C S +S    D           IDD+E+D Y+ NE E   K  +W   N EYL EQ 
Sbjct: 442 IRECISSQSSDPKDASGDGELDLSGIDDLEIDRYILNESEARVKAELWMRENAEYLREQR 501

Query: 304 VKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQ 363
            KEA  A  K+                               KE + K++   +    A 
Sbjct: 502 EKEARIAKEKE---------------------------LGIYKEHKPKKSCKRREPIQAS 553

Query: 364 TAAEATRQMLNKKRLSSKINYDVLDKLFDESAGT 377
           TA EA  +ML +K++SSKINY VL  L     G+
Sbjct: 562 TAREAIEKMLEQKKISSKINYSVLRGLSSAGGGS 553

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy Swiss-Prot
Match: Q8CFK2 (Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.8e-25
Identity = 113/388 (29.12%), Postives = 174/388 (44.85%), Query Frame = 0


Query: 4   EVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLT 63
           EVS TAL+++  MKRDWM TGR+PSGLCGAAL V+A  H  + +  ++I +V +C++TL 
Sbjct: 202 EVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLR 261

Query: 64  KRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPY 123
           KRL EFE+T +  LT++EF+ +  + +      T G +       ++VL     +     
Sbjct: 262 KRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEI 321

Query: 124 ALGLCRICYDDFVEL---------SGGL-----DG-GADPPAFQTAERERLAKEMAEEGS 183
           +       Y D +E+          G L     DG G D  +    E +   +E+    S
Sbjct: 322 S------SYQDAIEIELENSRPKAKGALANLSKDGSGEDATSSPRCEEDTEDEELEAAAS 381

Query: 184 NDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNK 243
           + +    +   G +  +    + D      A +++       A+ G +D   E     + 
Sbjct: 382 HMNKDFYRELLGDDDGSEAAGDPDGGSRPLALESLLGPLPTAASLGISDSIRECISSPS- 441

Query: 244 LGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAA 303
            GD   +  + D     S IDD+E+D Y+ NE E   K  +W   N EYL EQ  KEA  
Sbjct: 442 -GDP--KDSSGDGELDLSGIDDLEIDRYILNESEARVKAELWMRENAEYLREQKEKEARI 501

Query: 304 AAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEAT 363
           A  K+                               KE + K++   +    A TA EA 
Sbjct: 502 AKEKE---------------------------LGIYKEHKPKKSCKRREPILASTAGEAI 552

Query: 364 RQMLNKKRLSSKINYDVLDKLFDESAGT 377
            +ML +K++SSKINY VL  L  +  G+
Sbjct: 562 EKMLEQKKISSKINYSVLRDLNSKGGGS 552

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy Swiss-Prot
Match: Q9P6R0 (Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brf1 PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 2.9e-20
Identity = 92/376 (24.47%), Postives = 167/376 (44.41%), Query Frame = 0


Query: 5   VSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLTK 64
           V+  A++++  M RDWMQ GR+P+G+CGA L ++A  +  + S  +++ +V + D T+ K
Sbjct: 199 VANDAIRLVARMNRDWMQIGRRPAGICGACLLIAARMNNFRRSVREVVHVVKVADITIQK 258

Query: 65  RLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPYA 124
           RL EF+ TESG L++ +F                                          
Sbjct: 259 RLDEFKLTESGDLSIADF------------------------------------------ 318

Query: 125 LGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPC 184
                         +  L+G +DPP+F   ++        + G+   S I    + ++P 
Sbjct: 319 -------------RNIWLEGQSDPPSFTKNQK------FQQYGAQKVSNIDHTQEYMSPI 378

Query: 185 NNI-EKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCA----- 244
               + + + + + + S+TV  + +       ADE+    +    L  D LR  +     
Sbjct: 379 KRTPDFDGNEVKSEELSQTVKVESQETPVHLKADEREIRKEVTETLKGDELRKISLQVNV 438

Query: 245 --SDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYE 304
             S+E  +  D+DD E++  L +++E   K  +W E+N++YL E+  K            
Sbjct: 439 KFSEEEVTLEDVDDDEIEDILLDKDEILTKTQVWMELNKDYLAEEEAK------------ 489

Query: 305 ANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKR 364
                   ++K  +DL       + +  ++R+R R  D+ +   A TAAE+ ++M+ ++ 
Sbjct: 499 --------NLKLQEDL----KKGIVRQPRKRRRYRPRDSTSDGIADTAAESAKEMMQQRA 489

Query: 365 LSSKINYDVLDKLFDE 373
            S KINY+ LD LFDE
Sbjct: 559 FSKKINYEALDMLFDE 489

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy Swiss-Prot
Match: P46070 (Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TDS4 PE=3 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 2.9e-12
Identity = 98/380 (25.79%), Postives = 173/380 (45.53%), Query Frame = 0


Query: 2   KKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDAT 61
           K +V R A+K+  +M RDWM  GR+P+G+ GA L ++   + ++ + S+I+ I H+ + T
Sbjct: 206 KIKVIRDAVKLAQTMSRDWMYEGRRPAGIAGACLLLACRMNNLRRTHSEIVAISHVAEET 265

Query: 62  LTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKN---- 121
           L +RL EF+NT S  L+++EF    D+ + +  ER+  SK     S D+     K     
Sbjct: 266 LQQRLNEFKNTTSAKLSVKEF--RDDETEVNEGERSAESK---PPSFDKNRLKEKKIKDS 325

Query: 122 -DTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGK 181
            DT +           ++ V  +  L          + E     K+++E    + S I K
Sbjct: 326 LDTKEMLETS------EEAVSRNPILTQVLGAQELSSKEVLYYLKKLSERRKAEFSRI-K 385

Query: 182 FSQGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRT 241
            + G++  +  + E D   + D     S +++    +      T             L +
Sbjct: 386 ATHGIDGEDLHKTEKDKKRSLDEIDGYSLEKDPYRPRNLHLLPTTA----------SLLS 445

Query: 242 CASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYE 301
             SD  E+  D+DD E+D +L +EE    K+ IW ++N +YL EQ  K       ++A  
Sbjct: 446 KVSDHPENLDDVDDAELDSHLLDEEASKLKERIWIDINGDYLIEQESKR----LKQEADL 505

Query: 302 ANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRA----ADAKNVSPAQTAAEATRQML 361
           A+        ++ +   + ++A++ K + +          ADA +V     AA   + +L
Sbjct: 506 ASGNTSLRKKRSKRTNRNQSSASIVKVQVDGLPLDVSVDDADAVDV----VAAGGVKNLL 555

Query: 362 NKKRLSSKINYDVLDKLFDE 373
            K   S KINYD ++ LF +
Sbjct: 566 QKTTFSKKINYDAINGLFGQ 555

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy Swiss-Prot
Match: P29056 (Transcription factor IIIB 70 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BRF1 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-11
Identity = 100/424 (23.58%), Postives = 176/424 (41.51%), Query Frame = 0


Query: 2   KKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDAT 61
           K +V + A+K+   M +DWM  GR+P+G+ GA + ++   + ++ + ++I+ + H+ + T
Sbjct: 195 KIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEET 254

Query: 62  LTKRLIEFENTESGSLTLEEF--------------IVMADKAKASNSERTD------GSK 121
           L +RL EF+NT++  L++++F               V   K +    +  D       S+
Sbjct: 255 LQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKIKDSLDKEEMFQTSE 314

Query: 122 NGLNS-------------SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADP 181
             LN              SS EVL   K  + +       R    + ++ + G+DG    
Sbjct: 315 EALNKNPILTQVLGEQELSSKEVLFYLKQFSER-------RARVVERIKATNGIDG---- 374

Query: 182 PAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADAS-KTVSSKE 241
                       + +  EGS + +   K S+      ++E E       +   K V +K 
Sbjct: 375 ------------ENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKT 434

Query: 242 EAEAAKGAADEQTELDDGVNKLGD-------------DGLRTCASDESESWSDIDDIEVD 301
             E  +  +    +  DG +   D             D   +  SD+ ++  D+DD E++
Sbjct: 435 SEEKKENESGHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELN 494

Query: 302 GYLHNEEEKHYKKIIWEEMNREYLEEQAVKE-------AAAAAAKKAYEANFENCSEDMK 361
            +L NEE    K+ IW  +N ++L EQ  K        A    + K       N +   +
Sbjct: 495 AHLLNEEASKLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDE 554

Query: 362 AAKDLADAAAAAVAKSRKERQRKRAA-DAKNVSPAQTAAEATRQMLNKKRLSSKINYDVL 371
             K +  AAA  +    +++    AA  A   S   T A++ + ML K   S KINYD +
Sbjct: 555 PTKTVDAAAAIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAI 595

[Close]

BLAST of Cp4.1LG18g00580 vs. NCBI nr
Match: XP_023515936.1 (transcription factor IIIB 90 kDa subunit-like [Cucurbita pepo subsp. pepo] >XP_023515937.1 transcription factor IIIB 90 kDa subunit-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 848 bits (2192), Expect = 1.50e-306
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT
Sbjct: 255 TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG
Sbjct: 315 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 240
           LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD
Sbjct: 375 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 434

Query: 241 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 300
           ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE
Sbjct: 435 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 494

Query: 301 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 360
           NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK
Sbjct: 495 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 554

Query: 361 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGD 420
           INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGD
Sbjct: 555 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGD 614

Query: 421 GTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           GTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 615 GTYGSGLYYENMEEPYSYEHDYGYDEYD 642

[Close]

BLAST of Cp4.1LG18g00580 vs. NCBI nr
Match: KAG7023971.1 (Transcription factor IIIB 90 kDa subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 837 bits (2163), Expect = 3.88e-302
Identity = 441/448 (98.44%), Postives = 442/448 (98.66%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHGVKCSKSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAK SNSERTDGS NGLNSSSDEVLCVHKNDTT
Sbjct: 255 TLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTT 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSS IGKFSQG
Sbjct: 315 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSTIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 240
           LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD
Sbjct: 375 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 434

Query: 241 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 300
           ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE
Sbjct: 435 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 494

Query: 301 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 360
           NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK
Sbjct: 495 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 554

Query: 361 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGD 420
           INYDVLDKLFDESAGTELSAKKKR EEAGETDKTKDETKEFESTE KHGE EQENDYDGD
Sbjct: 555 INYDVLDKLFDESAGTELSAKKKRAEEAGETDKTKDETKEFESTEFKHGEPEQENDYDGD 614

Query: 421 GTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           GTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 615 GTYGSGLYYENMEEPYSYEHDYGYDEYD 642

[Close]

BLAST of Cp4.1LG18g00580 vs. NCBI nr
Match: XP_022961526.1 (transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961527.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961529.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961530.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata])

HSP 1 Score: 827 bits (2137), Expect = 3.38e-298
Identity = 439/448 (97.99%), Postives = 441/448 (98.44%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHGVKCSKSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAK SNSERTDGS NGLNSSSDEVLCVHKNDTT
Sbjct: 255 TLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTT 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG
Sbjct: 315 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 240
           LNPCNNIEKELDNLHAADASKT SSKE A+AAKGAADEQTELDD VNKLGDDGLRTCASD
Sbjct: 375 LNPCNNIEKELDNLHAADASKTDSSKE-ADAAKGAADEQTELDDVVNKLGDDGLRTCASD 434

Query: 241 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 300
           ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE
Sbjct: 435 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 494

Query: 301 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 360
           NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK
Sbjct: 495 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 554

Query: 361 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGD 420
           INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTE KHGE EQENDYDGD
Sbjct: 555 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTEFKHGEPEQENDYDGD 614

Query: 421 GTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           GTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 615 GTYGSGLYYENMEEPYSYEHDYGYDEYD 641

[Close]

BLAST of Cp4.1LG18g00580 vs. NCBI nr
Match: XP_022968688.1 (transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968689.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968690.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968691.1 transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima])

HSP 1 Score: 823 bits (2126), Expect = 1.66e-296
Identity = 438/449 (97.55%), Postives = 441/449 (98.22%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHGVKCSKSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAK SNSERTDGS NGLNSSSDEVLCVHKNDTT
Sbjct: 255 TLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTT 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG
Sbjct: 315 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAA-DEQTELDDGVNKLGDDGLRTCAS 240
           LNPCNNIEKELDNLHAADASKTVSSKE AEAAKGAA DEQ ELDDGVNKLGDD LRTCAS
Sbjct: 375 LNPCNNIEKELDNLHAADASKTVSSKE-AEAAKGAAGDEQRELDDGVNKLGDDALRTCAS 434

Query: 241 DESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANF 300
           DESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANF
Sbjct: 435 DESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANF 494

Query: 301 ENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSS 360
           ENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAA+AKNVSPAQTAAEATRQMLNKKRLSS
Sbjct: 495 ENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAAEAKNVSPAQTAAEATRQMLNKKRLSS 554

Query: 361 KINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDG 420
           KINYDVLDKLFDESAGTELSAKKKR E+AGETDKTKDETKEFESTE KHGEQEQENDYDG
Sbjct: 555 KINYDVLDKLFDESAGTELSAKKKRAEQAGETDKTKDETKEFESTEFKHGEQEQENDYDG 614

Query: 421 DGTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           DGTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 615 DGTYGSGLYYENMEEPYSYEHDYGYDEYD 642

[Close]

BLAST of Cp4.1LG18g00580 vs. NCBI nr
Match: KAG6590424.1 (Transcription factor IIIB 90 kDa subunit, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 823 bits (2127), Expect = 1.56e-295
Identity = 439/451 (97.34%), Postives = 441/451 (97.78%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHGVKCSKSDIIKIVHICDA
Sbjct: 265 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDA 324

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAK SNSERTDGS NGLNSSSDEVLCVHKNDTT
Sbjct: 325 TLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTT 384

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG
Sbjct: 385 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 444

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKG---AADEQTELDDGVNKLGDDGLRTC 240
           LNPCNNIEKELDNLHAADASKT SSKE A+AAKG   AADEQTELDDGVNKLGDDGLRTC
Sbjct: 445 LNPCNNIEKELDNLHAADASKTDSSKE-ADAAKGKMGAADEQTELDDGVNKLGDDGLRTC 504

Query: 241 ASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEA 300
           ASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEA
Sbjct: 505 ASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEA 564

Query: 301 NFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRL 360
           NFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRL
Sbjct: 565 NFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRL 624

Query: 361 SSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDY 420
           SSKINYDVLDKLFDESAGTELSAKKKR EEAGETDKTKDETKEFESTE KHGE EQENDY
Sbjct: 625 SSKINYDVLDKLFDESAGTELSAKKKRAEEAGETDKTKDETKEFESTEFKHGEPEQENDY 684

Query: 421 DGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           DGDGTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 685 DGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 714

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy TrEMBL
Match: A0A6J1HAL7 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111462077 PE=3 SV=1)

HSP 1 Score: 827 bits (2137), Expect = 1.64e-298
Identity = 439/448 (97.99%), Postives = 441/448 (98.44%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHGVKCSKSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAK SNSERTDGS NGLNSSSDEVLCVHKNDTT
Sbjct: 255 TLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTT 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG
Sbjct: 315 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 240
           LNPCNNIEKELDNLHAADASKT SSKE A+AAKGAADEQTELDD VNKLGDDGLRTCASD
Sbjct: 375 LNPCNNIEKELDNLHAADASKTDSSKE-ADAAKGAADEQTELDDVVNKLGDDGLRTCASD 434

Query: 241 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 300
           ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE
Sbjct: 435 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 494

Query: 301 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 360
           NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK
Sbjct: 495 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 554

Query: 361 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGD 420
           INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTE KHGE EQENDYDGD
Sbjct: 555 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTEFKHGEPEQENDYDGD 614

Query: 421 GTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           GTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 615 GTYGSGLYYENMEEPYSYEHDYGYDEYD 641

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy TrEMBL
Match: A0A6J1HVK9 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111467855 PE=3 SV=1)

HSP 1 Score: 823 bits (2126), Expect = 8.02e-297
Identity = 438/449 (97.55%), Postives = 441/449 (98.22%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHGVKCSKSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLTLEEFIVMADKAK SNSERTDGS NGLNSSSDEVLCVHKNDTT
Sbjct: 255 TLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTT 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG
Sbjct: 315 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAA-DEQTELDDGVNKLGDDGLRTCAS 240
           LNPCNNIEKELDNLHAADASKTVSSKE AEAAKGAA DEQ ELDDGVNKLGDD LRTCAS
Sbjct: 375 LNPCNNIEKELDNLHAADASKTVSSKE-AEAAKGAAGDEQRELDDGVNKLGDDALRTCAS 434

Query: 241 DESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANF 300
           DESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANF
Sbjct: 435 DESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANF 494

Query: 301 ENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSS 360
           ENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAA+AKNVSPAQTAAEATRQMLNKKRLSS
Sbjct: 495 ENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAAEAKNVSPAQTAAEATRQMLNKKRLSS 554

Query: 361 KINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDG 420
           KINYDVLDKLFDESAGTELSAKKKR E+AGETDKTKDETKEFESTE KHGEQEQENDYDG
Sbjct: 555 KINYDVLDKLFDESAGTELSAKKKRAEQAGETDKTKDETKEFESTEFKHGEQEQENDYDG 614

Query: 421 DGTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           DGTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 615 DGTYGSGLYYENMEEPYSYEHDYGYDEYD 642

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy TrEMBL
Match: A0A6J1F4S8 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111440829 PE=3 SV=1)

HSP 1 Score: 665 bits (1715), Expect = 1.36e-234
Identity = 363/450 (80.67%), Postives = 391/450 (86.89%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHG KC+KSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGAKCTKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNS--ERTDGSKNGLNSSSDEVLCVHKND 120
           TLTKRL+EFENTESGSLT+EEFIVMADK K SNS  ERTDGSKNGLN+S DEVLCVHKND
Sbjct: 255 TLTKRLVEFENTESGSLTMEEFIVMADKVKGSNSSTERTDGSKNGLNTSGDEVLCVHKND 314

Query: 121 TTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFS 180
             KPYALGLC+ CYDDFVELSGGLDGG++PPAFQ AERER+AK M EEG+NDSSA GK  
Sbjct: 315 CKKPYALGLCKSCYDDFVELSGGLDGGSNPPAFQCAERERMAKTMVEEGANDSSATGKLP 374

Query: 181 QGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCA 240
           +GLNPCNN +KELD  HA DASKTV S EEAE  KGA   Q  LDD             A
Sbjct: 375 RGLNPCNNTDKELDGAHA-DASKTVPSTEEAER-KGA---QRGLDD-------------A 434

Query: 241 SDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEAN 300
           SDESE+WSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQA K+AAAAAAK AYEAN
Sbjct: 435 SDESENWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKNAYEAN 494

Query: 301 FENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLS 360
           F+NCS D+KAAKDLADAAAAAVAKSRKERQRKRAA+AKN SPAQTAAEATR+MLNKKRLS
Sbjct: 495 FQNCSADLKAAKDLADAAAAAVAKSRKERQRKRAAEAKNASPAQTAAEATRKMLNKKRLS 554

Query: 361 SKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYD 420
           SKINYDVL+KLFDES GTE  +KKKR E+ G+TDK ++ TKEFESTE K  E EQE+DYD
Sbjct: 555 SKINYDVLEKLFDESGGTEPLSKKKREEQTGQTDKAQNMTKEFESTEHKESELEQEDDYD 614

Query: 421 GDGTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           G+GTYGSGLYYENM+E  +YE DYGYDEYD
Sbjct: 615 GEGTYGSGLYYENMDEAQNYEQDYGYDEYD 626

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy TrEMBL
Match: A0A6J1HZP4 (transcription factor IIIB 90 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111469566 PE=3 SV=1)

HSP 1 Score: 662 bits (1709), Expect = 1.15e-233
Identity = 362/450 (80.44%), Postives = 390/450 (86.67%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALY+SALSHG KC+KSDIIKIVHICDA
Sbjct: 195 MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGAKCTKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNS--ERTDGSKNGLNSSSDEVLCVHKND 120
           TLTKRL+EFENTESGSLT+EEFIVMADK K SNS  ERTDGSKNGLN S DEVLCVHKND
Sbjct: 255 TLTKRLVEFENTESGSLTMEEFIVMADKVKGSNSSTERTDGSKNGLNKSGDEVLCVHKND 314

Query: 121 TTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFS 180
             KPYALGLC+ CYDDFVELSGGLDGG++PPAFQ AERER+AK M EEG+NDS A GK  
Sbjct: 315 CKKPYALGLCKSCYDDFVELSGGLDGGSNPPAFQCAERERMAKTMVEEGANDSIATGKLP 374

Query: 181 QGLNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCA 240
           +GLNPCNN +KEL   HA DASKTVSS EEAE  KGA   Q  LDDG            A
Sbjct: 375 RGLNPCNNTDKELGGAHA-DASKTVSSTEEAER-KGA---QRGLDDG------------A 434

Query: 241 SDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEAN 300
           SDESE+WSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQA K+AAAAAAK AYEAN
Sbjct: 435 SDESENWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKNAYEAN 494

Query: 301 FENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLS 360
           F+NCS D+KAAKDLADAAAAAVAKSRKERQRKRAA+AKN SPAQTAAEATR+MLNKKRLS
Sbjct: 495 FQNCSADLKAAKDLADAAAAAVAKSRKERQRKRAAEAKNASPAQTAAEATRKMLNKKRLS 554

Query: 361 SKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYD 420
           SKINYDVL+KLFDES GTE  +KKKR E+ G+TDK ++ TKE+ESTE K  E EQE+DYD
Sbjct: 555 SKINYDVLEKLFDESGGTEPLSKKKREEQTGQTDKAQNMTKEYESTEHKESELEQEDDYD 614

Query: 421 GDGTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           G+GTYGSGLYYENM+E  +YE DYGYDEYD
Sbjct: 615 GEGTYGSGLYYENMDEAQNYEQDYGYDEYD 627

[Close]

BLAST of Cp4.1LG18g00580 vs. ExPASy TrEMBL
Match: A0A1S3BQV3 (transcription factor IIIB 60 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103492209 PE=3 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 4.10e-230
Identity = 361/450 (80.22%), Postives = 397/450 (88.22%), Query Frame = 0


Query: 1   MKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDA 60
           MKKEVS+TALKIITSMKRDWMQTGRKPSGLCGAALY+SALS+GVKC+KSDIIKIVHICDA
Sbjct: 195 MKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVKCTKSDIIKIVHICDA 254

Query: 61  TLTKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTT 120
           TLTKRLIEFENTESGSLT+EEFIVMADK K SNS     + NG N+SSDEVLCVHKN+  
Sbjct: 255 TLTKRLIEFENTESGSLTMEEFIVMADKVKGSNSY----TNNGSNASSDEVLCVHKNECK 314

Query: 121 KPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQG 180
           KPYALGLCR CYDDFVELSGGLDGG++PPAFQ+AE+ER+ K   EEGS+D SAIGKFSQG
Sbjct: 315 KPYALGLCRSCYDDFVELSGGLDGGSNPPAFQSAEKERMEKAAVEEGSDDCSAIGKFSQG 374

Query: 181 LNPCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASD 240
           L PCNN EKE DN+HA DAS+T S KE AE  KGAADEQ E D+G NK+G DGL T ASD
Sbjct: 375 LKPCNNTEKESDNVHA-DASETASFKE-AEV-KGAADEQREPDNGANKVGADGLETSASD 434

Query: 241 ESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFE 300
           +SE+WSDIDD+EVDGYLHNEEEKHYKKIIWEEMNREYLEEQA K+AAAAAAKKAYEANF+
Sbjct: 435 DSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQ 494

Query: 301 NCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSK 360
           NCSED+KAAKDLA+AAAAAVAKSRKERQ+KRAA+AKN +PAQTAAEATRQMLNKKRLSSK
Sbjct: 495 NCSEDLKAAKDLAEAAAAAVAKSRKERQQKRAAEAKNATPAQTAAEATRQMLNKKRLSSK 554

Query: 361 INYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDET-KEFESTELKHGEQEQENDYD- 420
           INYDVLDKLFDESAG E S KKK  E+A ETDK ++ T KEFE+TE      EQ++DYD 
Sbjct: 555 INYDVLDKLFDESAGMEPSTKKKCEEQAEETDKPRNTTTKEFETTE------EQDDDYDD 614

Query: 421 GDGTYGSGLYYENMEEPYSYEHDYGYDEYD 448
           G GTYGSGLYYENMEE Y++E DYGYDEYD
Sbjct: 615 GYGTYGSGLYYENMEETYNHEQDYGYDEYD 631

[Close]

BLAST of Cp4.1LG18g00580 vs. TAIR 10
Match: AT3G09360.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 315.5 bits (807), Expect = 7.0e-86
Identity = 205/452 (45.35%), Postives = 282/452 (62.39%), Query Frame = 0


Query: 3   KEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATL 62
           K+V  TA  II SMKRDW+QTGRKPSG+CGAALY +ALSHG+KCSK+DI+ IVHIC+ATL
Sbjct: 194 KDVVATARDIIASMKRDWIQTGRKPSGICGAALYTAALSHGIKCSKTDIVNIVHICEATL 253

Query: 63  TKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKP 122
           TKRLIEF +T+SG+L + E        ++   + T        S+ + VLC+H++  +KP
Sbjct: 254 TKRLIEFGDTDSGNLNVNELRERESHKRSFTMKPT--------SNKEAVLCMHQD--SKP 313

Query: 123 YALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLN 182
           +  GLC  CY DF+ +SGGL GG++PPAFQ AE+ER+ K   EE     S++        
Sbjct: 314 FGYGLCEDCYKDFINVSGGLVGGSNPPAFQRAEKERMEKAAREENEGGISSL-------- 373

Query: 183 PCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDES 242
              N +++L + + + + +     E+ E  K  A+E  +                 SDES
Sbjct: 374 ---NHDEQLYSDYCSMSKRGKQCSEKGEKDKDGAEEHAD----------------TSDES 433

Query: 243 ESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENC 302
           +++SDI D EV+GY++NEEE HYK I W EMN++YLEEQA KEAA  AA +A +A+  NC
Sbjct: 434 DNFSDISDDEVNGYINNEEETHYKTITWTEMNKDYLEEQAAKEAALKAASEALKASNSNC 493

Query: 303 SEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKIN 362
            ED   A+   +AA A  AKSRKE+Q+K+A +AKN +P  TA EA R+ L+KKRLSS IN
Sbjct: 494 PED---ARKAFEAAKADAAKSRKEKQQKKAEEAKNAAPPATAVEAVRRTLDKKRLSSVIN 553

Query: 363 YDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQEND------ 422
           YDVL+ LFD SA  E S K+ +TE   + +K K+E KE +S E ++GE E E++      
Sbjct: 554 YDVLESLFDTSA-PEKSPKRSKTET--DIEKKKEENKEMKSNEHENGENEDEDEEDEEEG 602

Query: 423 ----YDGDGTYGSG-LYYENMEEPYSYEHDYG 444
               YD    + +G  +YE  EE     +D+G
Sbjct: 614 NVESYDMKTDFQNGEKFYEEDEEEEEDGNDFG 602

[Close]

BLAST of Cp4.1LG18g00580 vs. TAIR 10
Match: AT2G01280.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 226.1 bits (575), Expect = 5.6e-59
Identity = 176/441 (39.91%), Postives = 248/441 (56.24%), Query Frame = 0


Query: 3   KEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATL 62
           K+V+ TA  II+SMKRDW+QTGRKPSG+CGAA+Y++ALSHG+  S++DI K+VH+C+AT+
Sbjct: 178 KDVANTAKNIISSMKRDWIQTGRKPSGICGAAIYMAALSHGIMYSRADIAKVVHMCEATI 237

Query: 63  TKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKP 122
           TKRL EF NTE+GSLT++E     D+++    + T   +   NS    V C HK+   K 
Sbjct: 238 TKRLNEFANTEAGSLTVDEL----DESEEILRKETFTPRP--NSDKGVVNCKHKD--LKR 297

Query: 123 YALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLN 182
           +  GLC+ C+DDF+ +SGG+ GG+DPPA+Q AE+ER+ K   EE             G+ 
Sbjct: 298 FGYGLCKSCHDDFIIISGGVVGGSDPPAYQRAEKERMEKAAREENEG----------GIG 357

Query: 183 PCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDES 242
             N+ E+    ++ +  +K  S K E E   G    +                   SDES
Sbjct: 358 NLNHDEQ----VNVSKRAKKCSEKGEGETYGGERHAE------------------YSDES 417

Query: 243 ESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENC 302
           +  SD DD EV+  L  E+E   K   W   N++YLEEQA KEAA  AA         NC
Sbjct: 418 DICSDDDDSEVEHVLLGEDETRLKTTAWNLQNKDYLEEQAEKEAALKAA---------NC 477

Query: 303 SEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKIN 362
            ED   A++L +A+ AAVA SRKE++RKRA +AKN  P+ TA EA+      +R++    
Sbjct: 478 PED---ARNLVEASKAAVANSRKEKRRKRAEEAKNAPPSATATEAS--YTETQRVN---Q 537

Query: 363 YDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGDGT 422
           + VLD+L D    T  + KK RTE    T+K K+E +  E       ++E E DY     
Sbjct: 538 HHVLDELLD----TSPTQKKPRTETV--TEKKKEEHEIVE-------DEEDEEDY--AAP 546

Query: 423 YGSGLYYENMEEPYSYEHDYG 444
           +    +YE+  E     +D+G
Sbjct: 598 HADENFYEDEVEEEENGYDFG 546

[Close]

BLAST of Cp4.1LG18g00580 vs. TAIR 10
Match: AT2G45100.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-55
Identity = 169/439 (38.50%), Postives = 229/439 (52.16%), Query Frame = 0


Query: 8   TALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATLTKRLI 67
           TA  II SMKRDWMQTGRKPSG+CGAALY +ALSHG+KCSK+DI+ IVHIC+ATLTKRLI
Sbjct: 199 TATHIIASMKRDWMQTGRKPSGICGAALYTAALSHGIKCSKTDIVNIVHICEATLTKRLI 258

Query: 68  EFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKPYALGL 127
           EF +TE+ SLT +E +   ++ K + + R+    N        VLC+H++   KP   GL
Sbjct: 259 EFGDTEAASLTADE-LSKTEREKETAALRSKRKPNFYKEG--VVLCMHQD--CKPVDYGL 318

Query: 128 CRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNI 187
           C  CYD+F+ +SGGL+GG+DPPAFQ AE+ER+                            
Sbjct: 319 CESCYDEFMTVSGGLEGGSDPPAFQRAEKERM---------------------------- 378

Query: 188 EKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDESESWSD 247
                               E +A+    D+Q  LD               SDES + SD
Sbjct: 379 --------------------EEKASSEENDKQVNLDG-------------HSDESSTLSD 438

Query: 248 IDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMK 307
           +DD E+D Y    EE    KI ++  N  Y E++A K+AA   A          C+    
Sbjct: 439 VDDRELDCYFRTPEEVRLVKIFFDHENPGYDEKEAAKKAAGLNA----------CNN--- 498

Query: 308 AAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLD 367
            A ++ +A+ AA AKSRKE++++RA + KN  P  T  EA   M+ +K+    IN D L+
Sbjct: 499 -ASNIFEASKAAAAKSRKEKRQQRAEEEKNAPPPATGIEAVDSMVKRKKFRD-INCDYLE 538

Query: 368 KLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTELKHGEQEQENDYDGDGTYGSGL 427
           +LFD  A  E S K+ +TE       T  E K+ E  E+   EQE+E DY          
Sbjct: 559 ELFD--ASVEKSPKRSKTE-------TVMEKKKKEEHEIVENEQEEE-DYAAP------- 538

Query: 428 YYENMEEPYSYEHDYGYDE 447
            YE  EE Y+  ++   D+
Sbjct: 619 -YEQDEEDYAAPYEMNTDK 538

[Close]

BLAST of Cp4.1LG18g00580 vs. TAIR 10
Match: AT1G30455.1 (transcription regulators;translation initiation factors;zinc ion binding;transcription activators )

HSP 1 Score: 76.3 bits (186), Expect = 7.2e-14
Identity = 107/403 (26.55%), Postives = 145/403 (35.98%), Query Frame = 0


Query: 3   KEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYVSALSHGVKCSKSDIIKIVHICDATL 62
           K+V  TA  II SMK +WMQTGRKPSG+CGAALY +ALSH                    
Sbjct: 34  KQVVETATHIIASMKSNWMQTGRKPSGICGAALYTAALSH-------------------- 93

Query: 63  TKRLIEFENTESGSLTLEEFIVMADKAKASNSERTDGSKNGLNSSSDEVLCVHKNDTTKP 122
                                                                       
Sbjct: 94  ------------------------------------------------------------ 153

Query: 123 YALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLN 182
                                GG+DPP+FQ AE+ER+ +E A    ND            
Sbjct: 154 ---------------------GGSDPPSFQRAEKERM-EEKASTEENDKQQ--------- 213

Query: 183 PCNNIEKELDNLHAADASKTVSSKEEAEAAKGAADEQTELDDGVNKLGDDGLRTCASDES 242
                                                                   SDES
Sbjct: 214 -------------------------------------------------------NSDES 249

Query: 243 ESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENC 302
            + SD+DD E+D Y  N +E H  +II++  N  Y E    KEAAA  A          C
Sbjct: 274 STLSDLDDGELDCYFRNPKEVHLVEIIFDHENPGYDE----KEAAALNA----------C 249

Query: 303 SEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKIN 362
           +     A +L +A+ AA AKSRK+++++RA + KN  P  TA EA   M+ +K+     N
Sbjct: 334 NN----ASNLFEASKAAAAKSRKDKRQQRAEEEKNAPPPATAMEAVDSMVKRKKFPD-TN 249

Query: 363 YDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTE 406
            D L++L D SA  + ++K+ +TE   E +K + E  E E  E
Sbjct: 394 CDYLEELLDTSA--QKASKRLKTETVMEKNKEEHEIVENEQDE 249

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g00580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92994	1.2e-26	29.70	Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV...	[more]
Q8CFK2	6.8e-25	29.12	Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 S...	[more]
Q9P6R0	2.9e-20	24.47	Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 97...	[more]
P46070	2.9e-12	25.79	Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 85...	[more]
P29056	1.1e-11	23.58	Transcription factor IIIB 70 kDa subunit OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Cp4.1LG18g00580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515936.1	1.50e-306	100.00	transcription factor IIIB 90 kDa subunit-like [Cucurbita pepo subsp. pepo] >XP_0...	[more]
KAG7023971.1	3.88e-302	98.44	Transcription factor IIIB 90 kDa subunit [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022961526.1	3.38e-298	97.99	transcription factor IIIB 60 kDa subunit-like [Cucurbita moschata] >XP_022961527...	[more]
XP_022968688.1	1.66e-296	97.55	transcription factor IIIB 60 kDa subunit-like [Cucurbita maxima] >XP_022968689.1...	[more]
KAG6590424.1	1.56e-295	97.34	Transcription factor IIIB 90 kDa subunit, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Cp4.1LG18g00580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAL7	1.64e-298	97.99	transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HVK9	8.02e-297	97.55	transcription factor IIIB 60 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1F4S8	1.36e-234	80.67	transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HZP4	1.15e-233	80.44	transcription factor IIIB 90 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S3BQV3	4.10e-230	80.22	transcription factor IIIB 60 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103492209...	[more]

BLAST of Cp4.1LG18g00580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09360.1	7.0e-86	45.35	Cyclin/Brf1-like TBP-binding protein	[more]
AT2G01280.1	5.6e-59	39.91	Cyclin/Brf1-like TBP-binding protein	[more]
AT2G45100.1	2.2e-55	38.50	Cyclin/Brf1-like TBP-binding protein	[more]
AT1G30455.1	7.2e-14	26.55	transcription regulators;translation initiation factors;zinc ion binding;transcr...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 292..312
None	No IPR available	GENE3D	1.20.5.650	Single helix bin	coord: 230..288 e-value: 1.5E-18 score: 68.4
None	No IPR available	GENE3D	1.10.472.10		coord: 1..74 e-value: 8.2E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..448
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..334
IPR013150	Transcription factor TFIIB, cyclin-like domain	PFAM	PF00382	TFIIB	coord: 2..62 e-value: 3.1E-10 score: 40.0
IPR011665	Brf1, TBP-binding domain	PFAM	PF07741	BRF1	coord: 246..371 e-value: 4.4E-30 score: 104.0
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 2..374
IPR029529	Transcription factor IIIB subunit Brf1	PANTHER	PTHR11618:SF4	TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT	coord: 2..374
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 3..60 e-value: 1.01266E-4 score: 39.1441
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 2..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g00580.1	Cp4.1LG18g00580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006383	transcription by RNA polymerase III
biological_process	GO:0070897	transcription preinitiation complex assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0000126	transcription factor TFIIIB complex
molecular_function	GO:0000995	RNA polymerase III general transcription initiation factor activity
molecular_function	GO:0017025	TBP-class protein binding