Cp4.1LG11g06750.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAATTTCGACCCTTGATTTGTAAAAAACCAATTAAAACAACAATAATCCAATAATCAACGATATTTGTGTTGCCTGTGTTGTTTTAGATTATACCCATTTCCAAATTCCATCCAAGAATCATCCTCTTCCTCCTTCTCAACGTCTATCTGCAGATCCTTTCCCTTTCGCTCTTCCCGAGGCCTTACCATCATTTCAACACAAAAATTCGCAGACCCTTTTCCATTTCCCCCATTTCTACCGCGTTTTCGAGTCTTCGATCTCCCCATTACCTCGAAATCAACGCATTTCATCTCTCTTCTGTTCGTCGCCTTCGATTTTACATCGTGTAAGAGTTCTTTCCCCTCTGCATTTTTTTTCACGATTTTGTGGGATTGAAGGTTTTGACGGATTGATTGGATGATATTTTAGATTTAGATGTTTTTTCTTTCGATGATGGAGGTGGGTTTGTGTTATGGGTTCCGATCGAGATAAGAATTGAATGAACTGATGAAATTGGTGTAATATTTTTTTCCTGTTTGATTAGGAAGCTTGAGGGCAATTATAGGTCTGTTTCTTCTCCTCCTATGGCGGTCGATCTTGCTGTTTTGCTCTCTTTTTTGTAGTGGATTTGATGATCTTGTTGGTTTGCTGTATTGGGTTCGAATATTTCTCTTGTTGTTCTTGGTTATCTCTTCACTGCATTGTTGTTTTAGTGCTTGGAGTTATGTGCTTACCCTTATTGCCTCTGTCACATTTTGATTATCGCTTTAGTTTTTCAGTGTTCCTACAGAGAGGATTTCTATAGGAAGTATTTGCTTATAGCAAGGAGATGCTGAAGTTGGTTTTAATCTTAAGCATGATCCTTATGTCTTCTTGGATGAAACACAATGGTTTTGTGAGATCTTAAATCGGTTGGAAAGGAGAACGAAACATTTTTTATAAGGGTGTGAAAACTTCTCCCTAGCAAACTTGTTTTTTGGAAGTCCGGAAGGGAAAGCGCAAACTTGTTTTTTGGAAGTCTGGAAGGGAAAGCACAAGGAGGACAATATCTGCTAGTGGTGGGATTGAGCTTGTTACAAATGGTATCAGAGCTAGACATCGGGTGATGTGCTAGCGAGGAGGCTGAGCCTTGAAGGGAGGTGGACATGAGACGGTGTGCCAGCATCCTGGGTCCCGAAGGGAGGGTGGATTGGGGTGTCTCACATTGATTGGAGAAAGTAACGAGTGTTGCCGAGGACACTGGACTCTCAAGGGAGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAATATTCTTTATAACGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGAAAAGTTTAAAGAGGGCAATATCTACTAATGATGAGCACGATGAGGCGTTGAACTTAGCCCTAAAAGTTCTCTTTAGAAAACGTAAATACACCTTTTGAATATTTTGAGCTTAATGATGAATTAATGCTCCTTATTGCCATCTCCTTTATTTCATCATTTGCCAGCAACAGCTCTTAAACAAACTTCTACTAACTCTGTGCAAACCAGCTAATTCAATGGCCAAAAACTAACTCCCTTGCCTAACTGATTAGTCCACAGATTTTGAAGAATTCTTGGATTTCATTATTTTTTCCTTAGCTTATAGATGGTGTAACGGTCCAAGCCCACCGCTAATAGATATTGTCCTCTTTGGGTTTTTCCTTTCAAGCTTTCCCTCAAGGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTTCACACCGTTATAAAAAATGTTTCGTTCTCCTCCCCAACTAACGTGGGATCTCATAATCCACCCCCCTTCAGGGCCCAACGTCCTCGTTGGCACTTGTTCTCTTCTCCAATCGACGTGGGACCCCCCCAATCTACCCCCTTCAGGGCTCAACCTCCTCACTAGCACATCTCCTAGTGTCTGCCTCTGATACCAACTGTAACGGCCTAAACCTACCTTTAGCAGGTATTGTCCTCTTTAAGCTAGGATTGTGAGATCCCACATCTGTTAGGAAAGATAACGAAGCATTCTTTATAAGAGTGTAGAAACCTCTCTCTAGTAGACACGTTTTAAAAACTTTGAGGGGAAGCTCAAAAGGGAAAGCCAAAAGAGGACAATATCTGTTAGCGGTGGGCTTGGGCGGTTACAGATGGTGTTTTCTTCATAAATCTTCTTGTGAACATTTAGCTTTGTTTAACCTTTTCACTTACGATCCTATCCTGCCCTGTTTGCAGTATCTTTTCTTCTCAAGGATTTCATCGTTGCTTTGAGTTTTGACTTGTAATCTCTTTTAGCTTTGGGAGTGGGAGGAGTAGGATCATCCCTTTTCATTTCTTAAAAAAAAAAAAGAATGTAAACTGAGCTTATAATTAGAATCTGTTTTCTTCGACTGCAGCAGGGTTTTGGATCATGGTACGATGTGGTTAAACCGCTGATAGTTTACCAGTATGGTTGGTGGTGAAGAAAATGACTTGAACGAGCCAAGTTTATCGAACCACCAAGAAACGACCCAGCAAGATGTTATAGCTGTTTCTTCCTCGTCATCCTCTTTCTCGTCTTCTTCCTCTGAAAGCGAGTTACATGAGACTAGGAATGAGAATGTCCAATCTCAATCTAATGAAAACGTCTCTCGTGAACTAGTCCTATACAACCCTTCTGCTAATGATGAAGGAGGTGCACATGAACCTGTGTCCACACCTGTTAGACACCAGCGTCCACCGCTTCTTGGACACTTGACTCCGAATTCGTCTAGAGTTTTGCGAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACAAAGGAAAAATATGAGGAAATACGTGAACATCTGCTTGAGGAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTAATGATCCTGCTGACATTACTCAAGATGATGGCAGGCTTTGGGCAATTGACAAGCCCAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATGTACTTTAAGTTCTTTATTATCACTGCTATGTTTGTGGCTTTTATTGTCTGTACCTGTCTGATATTTTGTTGTTATCAGGTATTATATTGCACCATCAGGTAAGAGGCTTCGTTCCATGGTGGATATCCAGAAGTATGTTGCTCTACATTGTGCTTCTCACTATTTAATGTTTGATTAAATTCTTGTAAATGATCTGTGGCCTACATATTGATTTTTTTTGTGGCACCCTCTGATGGTTTGTTTGGTTCTGAAGATACCTGATCGAACATCCGGAGTACCAAACCGAAGGTGTTTGTATGACACGGTTTTCATTTCAAACCCCGAAGCCTCTGCAGGAAAATTATGTAAGAAAGCGTCGCGCCAATATGAATGCTTCGTGTGACGGTTCTAAGCTTGAATCTGGTGAAGGTACTCGTTTCGTGTTTGTCCCTTGACCTGCATAGTGCCTTTAGGGGGGTTTGGGTTATAGAGGACAATGATAAACTTTAGATGCTTGAGAGATCTTGGAGCTCGTGTTGTCTCTCGTTAGATTTAACGTCTCTTTGGTTGTATGTTACTAACGTCTCTTTGGTGTCGTCTCTCGTTAGATTTAACGTCTAGGCAACTCCTTTTGTTGGGTTTTTTTTATGCCCTTCAGTGTTCTTGCAGGTTTATAGCTTTGCAATCCGCTATTACGCTAGATCCTACATTGGTTGGAGAGAGGAACAAAATATTTTTATAAGGGTGTGGAAACCCTCTCCCTAACAGGCGCATTTTAAAATCTTGAGAGAAAGCTCAAAGAGAACAATCTCTACTCGTGGTGGGCTTGGGCTGTTACTAATGGTATCAGAGCCAGACACCAGGAGGTGTACCAGTGTCCAGCGATGACACTGGGCTCCGAAGGGGGTTGGATTGTGTGTTCCCACATCAATTGGAGAGAGGAACGAGTGTCTGCGAGGAGCTGGGCCCCAAATAGGGGTGGATTGTGAGATCTCATATTGGTTGGAGAGGGGAACGAAACATTCAATCTCTTACTAGCAGACGCGTTTTAGAACCTTGAGGGGAAGCCCGGAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTATTATAAATAGTATCAGAGCCCAACACTGGACAGTGTACCAGTGAGGATATTAGGCCTCGAAGGGGGGTGGATTATGAGATCCCACATCCATTAGAGAGAGGAACGAGTGCCAGTGAGGACGCTGGCCCTGAATGGGGTGGATTGTGAGATCCCACATCGGTTGAAAGGAGGAATGAAACATTCTTTTGAAGTTGTTTGAGCATTAGTTTTTTTTTCTTCAATTCTTTTAAAAGAAAACGTAAGATATCGTCAATAGTTTCGTCCCGTCCCATACGTCCCATACATCGACCATGTTTATTCAAAAGCTTCAATGTATGTTATGTTAAACAGTAGATTCTCCCTGTTTTTTGCAGTGTATCCAATATCATGGGCTCGTCCAGACAATTCTACTGCATTGCAGCTTGGAAGGCCCGGGCTCTCGGAACTGTTTCCGACTGCACCAGTCGACAATCGGGCCAGTCAACCAGCAAAGAAGGCGAAAAGAGCTGTAGCAAAGGAGATGCGTAGTTCTCTCGCATCGACCGAACCTCCTGATTTATCGTTAGAACGTTACTTCAACGAATATAAAAAGTAATACCGGTGAGAACAGGTTGGTTCCATCAAAGTGGAAGAAAAGGAGGAATTTTGGAAAGGAAACCATGACAGAATATGTATATTATCATACCCTTATCGGGTAATTTTGGTCGTGGTGTATGAGATCGAGATCGAGATTCGAACCTTTGACATTCTTATTGATTGAGGATATTAAACTTTAGTTTGTTGAGTTATGTTCGGGTTTGACTATATTCTATGTACGAGATGGAAGAATATGTCTCCCATTCTATATATCATACAACAAAGTTTCACTTTCTATACTTCTCTTTCAAACAAATCGACCC GCAATTTCGACCCTTGATTTGTAAAAAACCAATTAAAACAACAATAATCCAATAATCAACGATATTTGTGTTGCCTGTGTTGTTTTAGATTATACCCATTTCCAAATTCCATCCAAGAATCATCCTCTTCCTCCTTCTCAACGTCTATCTGCAGATCCTTTCCCTTTCGCTCTTCCCGAGGCCTTACCATCATTTCAACACAAAAATTCGCAGACCCTTTTCCATTTCCCCCATTTCTACCGCGTTTTCGAGTCTTCGATCTCCCCATTACCTCGAAATCAACGCATTTCATCTCTCTTCTGTTCGTCGCCTTCGATTTTACATCGTTTTACCAGTATGGTTGGTGGTGAAGAAAATGACTTGAACGAGCCAAGTTTATCGAACCACCAAGAAACGACCCAGCAAGATGTTATAGCTGTTTCTTCCTCGTCATCCTCTTTCTCGTCTTCTTCCTCTGAAAGCGAGTTACATGAGACTAGGAATGAGAATGTCCAATCTCAATCTAATGAAAACGTCTCTCGTGAACTAGTCCTATACAACCCTTCTGCTAATGATGAAGGAGGTGCACATGAACCTGTGTCCACACCTGTTAGACACCAGCGTCCACCGCTTCTTGGACACTTGACTCCGAATTCGTCTAGAGTTTTGCGAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACAAAGGAAAAATATGAGGAAATACGTGAACATCTGCTTGAGGAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTAATGATCCTGCTGACATTACTCAAGATGATGGCAGGCTTTGGGCAATTGACAAGCCCAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTATATTGCACCATCAGGTAAGAGGCTTCGTTCCATGGTGGATATCCAGAAATACCTGATCGAACATCCGGAGTACCAAACCGAAGGTGTTTGTATGACACGGTTTTCATTTCAAACCCCGAAGCCTCTGCAGGAAAATTATGTAAGAAAGCGTCGCGCCAATATGAATGCTTCGTGTGACGGTTCTAAGCTTGAATCTGGTGAAGTGTATCCAATATCATGGGCTCGTCCAGACAATTCTACTGCATTGCAGCTTGGAAGGCCCGGGCTCTCGGAACTGTTTCCGACTGCACCAGTCGACAATCGGGCCAGTCAACCAGCAAAGAAGGCGAAAAGAGCTGTAGCAAAGGAGATGCGTAGTTCTCTCGCATCGACCGAACCTCCTGATTTATCGTTAGAACGTTACTTCAACGAATATAAAAAGTAATACCGGTGAGAACAGGTTGGTTCCATCAAAGTGGAAGAAAAGGAGGAATTTTGGAAAGGAAACCATGACAGAATATGTATATTATCATACCCTTATCGGGTAATTTTGGTCGTGGTGTATGAGATCGAGATCGAGATTCGAACCTTTGACATTCTTATTGATTGAGGATATTAAACTTTAGTTTGTTGAGTTATGTTCGGGTTTGACTATATTCTATGTACGAGATGGAAGAATATGTCTCCCATTCTATATATCATACAACAAAGTTTCACTTTCTATACTTCTCTTTCAAACAAATCGACCC ATGGTTGGTGGTGAAGAAAATGACTTGAACGAGCCAAGTTTATCGAACCACCAAGAAACGACCCAGCAAGATGTTATAGCTGTTTCTTCCTCGTCATCCTCTTTCTCGTCTTCTTCCTCTGAAAGCGAGTTACATGAGACTAGGAATGAGAATGTCCAATCTCAATCTAATGAAAACGTCTCTCGTGAACTAGTCCTATACAACCCTTCTGCTAATGATGAAGGAGGTGCACATGAACCTGTGTCCACACCTGTTAGACACCAGCGTCCACCGCTTCTTGGACACTTGACTCCGAATTCGTCTAGAGTTTTGCGAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACAAAGGAAAAATATGAGGAAATACGTGAACATCTGCTTGAGGAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTAATGATCCTGCTGACATTACTCAAGATGATGGCAGGCTTTGGGCAATTGACAAGCCCAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTATATTGCACCATCAGGTAAGAGGCTTCGTTCCATGGTGGATATCCAGAAATACCTGATCGAACATCCGGAGTACCAAACCGAAGGTGTTTGTATGACACGGTTTTCATTTCAAACCCCGAAGCCTCTGCAGGAAAATTATGTAAGAAAGCGTCGCGCCAATATGAATGCTTCGTGTGACGGTTCTAAGCTTGAATCTGGTGAAGTGTATCCAATATCATGGGCTCGTCCAGACAATTCTACTGCATTGCAGCTTGGAAGGCCCGGGCTCTCGGAACTGTTTCCGACTGCACCAGTCGACAATCGGGCCAGTCAACCAGCAAAGAAGGCGAAAAGAGCTGTAGCAAAGGAGATGCGTAGTTCTCTCGCATCGACCGAACCTCCTGATTTATCGTTAGAACGTTACTTCAACGAATATAAAAAGTAA MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENVSRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVDNRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK Homology
BLAST of Cp4.1LG11g06750.1 vs. ExPASy Swiss-Prot
Match: Q8LA53 (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.2e-71 Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy Swiss-Prot
Match: Q9FZP6 (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.2e-36 Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy Swiss-Prot
Match: Q9LYB9 (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 7.4e-24 Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy Swiss-Prot
Match: Q5XEN5 (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.3e-23 Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy Swiss-Prot
Match: Q9Z2E1 (Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 GN=Mbd2 PE=2 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 5.9e-05 Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. NCBI nr
Match: XP_023546682.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023546683.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 688 bits (1775), Expect = 9.21e-250 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. NCBI nr
Match: XP_022929597.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022929598.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata]) HSP 1 Score: 686 bits (1771), Expect = 3.75e-249 Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. NCBI nr
Match: XP_022996920.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita maxima] >XP_022996922.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita maxima]) HSP 1 Score: 681 bits (1758), Expect = 3.60e-247 Identity = 337/341 (98.83%), Postives = 337/341 (98.83%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. NCBI nr
Match: KAG6598906.1 (Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 680 bits (1755), Expect = 1.03e-246 Identity = 338/341 (99.12%), Postives = 338/341 (99.12%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. NCBI nr
Match: KAG7029864.1 (Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 674 bits (1740), Expect = 3.13e-244 Identity = 339/353 (96.03%), Postives = 339/353 (96.03%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy TrEMBL
Match: A0A6J1EN70 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436133 PE=4 SV=1) HSP 1 Score: 686 bits (1771), Expect = 1.82e-249 Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy TrEMBL
Match: A0A6J1K3E0 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492010 PE=4 SV=1) HSP 1 Score: 681 bits (1758), Expect = 1.74e-247 Identity = 337/341 (98.83%), Postives = 337/341 (98.83%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy TrEMBL
Match: A0A0A0LHE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1) HSP 1 Score: 561 bits (1446), Expect = 6.31e-200 Identity = 284/343 (82.80%), Postives = 312/343 (90.96%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy TrEMBL
Match: A0A5D3CST2 (Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00130 PE=4 SV=1) HSP 1 Score: 551 bits (1421), Expect = 3.90e-196 Identity = 281/343 (81.92%), Postives = 308/343 (89.80%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. ExPASy TrEMBL
Match: A0A1S3BR32 (methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103492271 PE=4 SV=1) HSP 1 Score: 551 bits (1421), Expect = 3.90e-196 Identity = 281/343 (81.92%), Postives = 308/343 (89.80%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. TAIR 10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02 ) HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73 Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. TAIR 10
Match: AT5G35330.2 (methyl-CPG-binding domain protein 02 ) HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73 Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. TAIR 10
Match: AT5G35330.3 (methyl-CPG-binding domain protein 02 ) HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73 Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. TAIR 10
Match: AT5G35338.2 (methyl-CPG-binding domain 12 ) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-37 Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Cp4.1LG11g06750.1 vs. TAIR 10
Match: AT3G63030.1 (methyl-CPG-binding domain 4 ) HSP 1 Score: 112.8 bits (281), Expect = 5.3e-25 Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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