Cp4.1LG11g06750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g06750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	methyl-CpG-binding domain-containing protein 2-like
Location	Cp4.1LG11: 4276013 .. 4281060 (+)
RNA-Seq Expression	Cp4.1LG11g06750
Synteny	Cp4.1LG11g06750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATTTCGACCCTTGATTTGTAAAAAACCAATTAAAACAACAATAATCCAATAATCAACGATATTTGTGTTGCCTGTGTTGTTTTAGATTATACCCATTTCCAAATTCCATCCAAGAATCATCCTCTTCCTCCTTCTCAACGTCTATCTGCAGATCCTTTCCCTTTCGCTCTTCCCGAGGCCTTACCATCATTTCAACACAAAAATTCGCAGACCCTTTTCCATTTCCCCCATTTCTACCGCGTTTTCGAGTCTTCGATCTCCCCATTACCTCGAAATCAACGCATTTCATCTCTCTTCTGTTCGTCGCCTTCGATTTTACATCGTGTAAGAGTTCTTTCCCCTCTGCATTTTTTTTCACGATTTTGTGGGATTGAAGGTTTTGACGGATTGATTGGATGATATTTTAGATTTAGATGTTTTTTCTTTCGATGATGGAGGTGGGTTTGTGTTATGGGTTCCGATCGAGATAAGAATTGAATGAACTGATGAAATTGGTGTAATATTTTTTTCCTGTTTGATTAGGAAGCTTGAGGGCAATTATAGGTCTGTTTCTTCTCCTCCTATGGCGGTCGATCTTGCTGTTTTGCTCTCTTTTTTGTAGTGGATTTGATGATCTTGTTGGTTTGCTGTATTGGGTTCGAATATTTCTCTTGTTGTTCTTGGTTATCTCTTCACTGCATTGTTGTTTTAGTGCTTGGAGTTATGTGCTTACCCTTATTGCCTCTGTCACATTTTGATTATCGCTTTAGTTTTTCAGTGTTCCTACAGAGAGGATTTCTATAGGAAGTATTTGCTTATAGCAAGGAGATGCTGAAGTTGGTTTTAATCTTAAGCATGATCCTTATGTCTTCTTGGATGAAACACAATGGTTTTGTGAGATCTTAAATCGGTTGGAAAGGAGAACGAAACATTTTTTATAAGGGTGTGAAAACTTCTCCCTAGCAAACTTGTTTTTTGGAAGTCCGGAAGGGAAAGCGCAAACTTGTTTTTTGGAAGTCTGGAAGGGAAAGCACAAGGAGGACAATATCTGCTAGTGGTGGGATTGAGCTTGTTACAAATGGTATCAGAGCTAGACATCGGGTGATGTGCTAGCGAGGAGGCTGAGCCTTGAAGGGAGGTGGACATGAGACGGTGTGCCAGCATCCTGGGTCCCGAAGGGAGGGTGGATTGGGGTGTCTCACATTGATTGGAGAAAGTAACGAGTGTTGCCGAGGACACTGGACTCTCAAGGGAGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAATATTCTTTATAACGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGAAAAGTTTAAAGAGGGCAATATCTACTAATGATGAGCACGATGAGGCGTTGAACTTAGCCCTAAAAGTTCTCTTTAGAAAACGTAAATACACCTTTTGAATATTTTGAGCTTAATGATGAATTAATGCTCCTTATTGCCATCTCCTTTATTTCATCATTTGCCAGCAACAGCTCTTAAACAAACTTCTACTAACTCTGTGCAAACCAGCTAATTCAATGGCCAAAAACTAACTCCCTTGCCTAACTGATTAGTCCACAGATTTTGAAGAATTCTTGGATTTCATTATTTTTTCCTTAGCTTATAGATGGTGTAACGGTCCAAGCCCACCGCTAATAGATATTGTCCTCTTTGGGTTTTTCCTTTCAAGCTTTCCCTCAAGGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTTCACACCGTTATAAAAAATGTTTCGTTCTCCTCCCCAACTAACGTGGGATCTCATAATCCACCCCCCTTCAGGGCCCAACGTCCTCGTTGGCACTTGTTCTCTTCTCCAATCGACGTGGGACCCCCCCAATCTACCCCCTTCAGGGCTCAACCTCCTCACTAGCACATCTCCTAGTGTCTGCCTCTGATACCAACTGTAACGGCCTAAACCTACCTTTAGCAGGTATTGTCCTCTTTAAGCTAGGATTGTGAGATCCCACATCTGTTAGGAAAGATAACGAAGCATTCTTTATAAGAGTGTAGAAACCTCTCTCTAGTAGACACGTTTTAAAAACTTTGAGGGGAAGCTCAAAAGGGAAAGCCAAAAGAGGACAATATCTGTTAGCGGTGGGCTTGGGCGGTTACAGATGGTGTTTTCTTCATAAATCTTCTTGTGAACATTTAGCTTTGTTTAACCTTTTCACTTACGATCCTATCCTGCCCTGTTTGCAGTATCTTTTCTTCTCAAGGATTTCATCGTTGCTTTGAGTTTTGACTTGTAATCTCTTTTAGCTTTGGGAGTGGGAGGAGTAGGATCATCCCTTTTCATTTCTTAAAAAAAAAAAAGAATGTAAACTGAGCTTATAATTAGAATCTGTTTTCTTCGACTGCAGCAGGGTTTTGGATCATGGTACGATGTGGTTAAACCGCTGATAGTTTACCAGTATGGTTGGTGGTGAAGAAAATGACTTGAACGAGCCAAGTTTATCGAACCACCAAGAAACGACCCAGCAAGATGTTATAGCTGTTTCTTCCTCGTCATCCTCTTTCTCGTCTTCTTCCTCTGAAAGCGAGTTACATGAGACTAGGAATGAGAATGTCCAATCTCAATCTAATGAAAACGTCTCTCGTGAACTAGTCCTATACAACCCTTCTGCTAATGATGAAGGAGGTGCACATGAACCTGTGTCCACACCTGTTAGACACCAGCGTCCACCGCTTCTTGGACACTTGACTCCGAATTCGTCTAGAGTTTTGCGAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACAAAGGAAAAATATGAGGAAATACGTGAACATCTGCTTGAGGAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTAATGATCCTGCTGACATTACTCAAGATGATGGCAGGCTTTGGGCAATTGACAAGCCCAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATGTACTTTAAGTTCTTTATTATCACTGCTATGTTTGTGGCTTTTATTGTCTGTACCTGTCTGATATTTTGTTGTTATCAGGTATTATATTGCACCATCAGGTAAGAGGCTTCGTTCCATGGTGGATATCCAGAAGTATGTTGCTCTACATTGTGCTTCTCACTATTTAATGTTTGATTAAATTCTTGTAAATGATCTGTGGCCTACATATTGATTTTTTTTGTGGCACCCTCTGATGGTTTGTTTGGTTCTGAAGATACCTGATCGAACATCCGGAGTACCAAACCGAAGGTGTTTGTATGACACGGTTTTCATTTCAAACCCCGAAGCCTCTGCAGGAAAATTATGTAAGAAAGCGTCGCGCCAATATGAATGCTTCGTGTGACGGTTCTAAGCTTGAATCTGGTGAAGGTACTCGTTTCGTGTTTGTCCCTTGACCTGCATAGTGCCTTTAGGGGGGTTTGGGTTATAGAGGACAATGATAAACTTTAGATGCTTGAGAGATCTTGGAGCTCGTGTTGTCTCTCGTTAGATTTAACGTCTCTTTGGTTGTATGTTACTAACGTCTCTTTGGTGTCGTCTCTCGTTAGATTTAACGTCTAGGCAACTCCTTTTGTTGGGTTTTTTTTATGCCCTTCAGTGTTCTTGCAGGTTTATAGCTTTGCAATCCGCTATTACGCTAGATCCTACATTGGTTGGAGAGAGGAACAAAATATTTTTATAAGGGTGTGGAAACCCTCTCCCTAACAGGCGCATTTTAAAATCTTGAGAGAAAGCTCAAAGAGAACAATCTCTACTCGTGGTGGGCTTGGGCTGTTACTAATGGTATCAGAGCCAGACACCAGGAGGTGTACCAGTGTCCAGCGATGACACTGGGCTCCGAAGGGGGTTGGATTGTGTGTTCCCACATCAATTGGAGAGAGGAACGAGTGTCTGCGAGGAGCTGGGCCCCAAATAGGGGTGGATTGTGAGATCTCATATTGGTTGGAGAGGGGAACGAAACATTCAATCTCTTACTAGCAGACGCGTTTTAGAACCTTGAGGGGAAGCCCGGAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTATTATAAATAGTATCAGAGCCCAACACTGGACAGTGTACCAGTGAGGATATTAGGCCTCGAAGGGGGGTGGATTATGAGATCCCACATCCATTAGAGAGAGGAACGAGTGCCAGTGAGGACGCTGGCCCTGAATGGGGTGGATTGTGAGATCCCACATCGGTTGAAAGGAGGAATGAAACATTCTTTTGAAGTTGTTTGAGCATTAGTTTTTTTTTCTTCAATTCTTTTAAAAGAAAACGTAAGATATCGTCAATAGTTTCGTCCCGTCCCATACGTCCCATACATCGACCATGTTTATTCAAAAGCTTCAATGTATGTTATGTTAAACAGTAGATTCTCCCTGTTTTTTGCAGTGTATCCAATATCATGGGCTCGTCCAGACAATTCTACTGCATTGCAGCTTGGAAGGCCCGGGCTCTCGGAACTGTTTCCGACTGCACCAGTCGACAATCGGGCCAGTCAACCAGCAAAGAAGGCGAAAAGAGCTGTAGCAAAGGAGATGCGTAGTTCTCTCGCATCGACCGAACCTCCTGATTTATCGTTAGAACGTTACTTCAACGAATATAAAAAGTAATACCGGTGAGAACAGGTTGGTTCCATCAAAGTGGAAGAAAAGGAGGAATTTTGGAAAGGAAACCATGACAGAATATGTATATTATCATACCCTTATCGGGTAATTTTGGTCGTGGTGTATGAGATCGAGATCGAGATTCGAACCTTTGACATTCTTATTGATTGAGGATATTAAACTTTAGTTTGTTGAGTTATGTTCGGGTTTGACTATATTCTATGTACGAGATGGAAGAATATGTCTCCCATTCTATATATCATACAACAAAGTTTCACTTTCTATACTTCTCTTTCAAACAAATCGACCC

mRNA sequence

GCAATTTCGACCCTTGATTTGTAAAAAACCAATTAAAACAACAATAATCCAATAATCAACGATATTTGTGTTGCCTGTGTTGTTTTAGATTATACCCATTTCCAAATTCCATCCAAGAATCATCCTCTTCCTCCTTCTCAACGTCTATCTGCAGATCCTTTCCCTTTCGCTCTTCCCGAGGCCTTACCATCATTTCAACACAAAAATTCGCAGACCCTTTTCCATTTCCCCCATTTCTACCGCGTTTTCGAGTCTTCGATCTCCCCATTACCTCGAAATCAACGCATTTCATCTCTCTTCTGTTCGTCGCCTTCGATTTTACATCGTTTTACCAGTATGGTTGGTGGTGAAGAAAATGACTTGAACGAGCCAAGTTTATCGAACCACCAAGAAACGACCCAGCAAGATGTTATAGCTGTTTCTTCCTCGTCATCCTCTTTCTCGTCTTCTTCCTCTGAAAGCGAGTTACATGAGACTAGGAATGAGAATGTCCAATCTCAATCTAATGAAAACGTCTCTCGTGAACTAGTCCTATACAACCCTTCTGCTAATGATGAAGGAGGTGCACATGAACCTGTGTCCACACCTGTTAGACACCAGCGTCCACCGCTTCTTGGACACTTGACTCCGAATTCGTCTAGAGTTTTGCGAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACAAAGGAAAAATATGAGGAAATACGTGAACATCTGCTTGAGGAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTAATGATCCTGCTGACATTACTCAAGATGATGGCAGGCTTTGGGCAATTGACAAGCCCAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTATATTGCACCATCAGGTAAGAGGCTTCGTTCCATGGTGGATATCCAGAAATACCTGATCGAACATCCGGAGTACCAAACCGAAGGTGTTTGTATGACACGGTTTTCATTTCAAACCCCGAAGCCTCTGCAGGAAAATTATGTAAGAAAGCGTCGCGCCAATATGAATGCTTCGTGTGACGGTTCTAAGCTTGAATCTGGTGAAGTGTATCCAATATCATGGGCTCGTCCAGACAATTCTACTGCATTGCAGCTTGGAAGGCCCGGGCTCTCGGAACTGTTTCCGACTGCACCAGTCGACAATCGGGCCAGTCAACCAGCAAAGAAGGCGAAAAGAGCTGTAGCAAAGGAGATGCGTAGTTCTCTCGCATCGACCGAACCTCCTGATTTATCGTTAGAACGTTACTTCAACGAATATAAAAAGTAATACCGGTGAGAACAGGTTGGTTCCATCAAAGTGGAAGAAAAGGAGGAATTTTGGAAAGGAAACCATGACAGAATATGTATATTATCATACCCTTATCGGGTAATTTTGGTCGTGGTGTATGAGATCGAGATCGAGATTCGAACCTTTGACATTCTTATTGATTGAGGATATTAAACTTTAGTTTGTTGAGTTATGTTCGGGTTTGACTATATTCTATGTACGAGATGGAAGAATATGTCTCCCATTCTATATATCATACAACAAAGTTTCACTTTCTATACTTCTCTTTCAAACAAATCGACCC

Coding sequence (CDS)

ATGGTTGGTGGTGAAGAAAATGACTTGAACGAGCCAAGTTTATCGAACCACCAAGAAACGACCCAGCAAGATGTTATAGCTGTTTCTTCCTCGTCATCCTCTTTCTCGTCTTCTTCCTCTGAAAGCGAGTTACATGAGACTAGGAATGAGAATGTCCAATCTCAATCTAATGAAAACGTCTCTCGTGAACTAGTCCTATACAACCCTTCTGCTAATGATGAAGGAGGTGCACATGAACCTGTGTCCACACCTGTTAGACACCAGCGTCCACCGCTTCTTGGACACTTGACTCCGAATTCGTCTAGAGTTTTGCGAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACAAAGGAAAAATATGAGGAAATACGTGAACATCTGCTTGAGGAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTAATGATCCTGCTGACATTACTCAAGATGATGGCAGGCTTTGGGCAATTGACAAGCCCAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTATATTGCACCATCAGGTAAGAGGCTTCGTTCCATGGTGGATATCCAGAAATACCTGATCGAACATCCGGAGTACCAAACCGAAGGTGTTTGTATGACACGGTTTTCATTTCAAACCCCGAAGCCTCTGCAGGAAAATTATGTAAGAAAGCGTCGCGCCAATATGAATGCTTCGTGTGACGGTTCTAAGCTTGAATCTGGTGAAGTGTATCCAATATCATGGGCTCGTCCAGACAATTCTACTGCATTGCAGCTTGGAAGGCCCGGGCTCTCGGAACTGTTTCCGACTGCACCAGTCGACAATCGGGCCAGTCAACCAGCAAAGAAGGCGAAAAGAGCTGTAGCAAAGGAGATGCGTAGTTCTCTCGCATCGACCGAACCTCCTGATTTATCGTTAGAACGTTACTTCAACGAATATAAAAAGTAA

Protein sequence

MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENVSRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVDNRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK

Homology

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BLAST of Cp4.1LG11g06750 vs. ExPASy Swiss-Prot
Match: Q8LA53 (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-71
Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0


Query: 47  TRNENVQSQSNENVSR---ELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRV 106
           +++  VQ  S+ N  R   +LV+Y+   ND+    E    PV+ Q         P SSR 
Sbjct: 4   SQSRAVQRSSSPNEDRGENQLVVYDLKGNDD---TEEEVLPVQSQ---------PLSSRT 63

Query: 107 L--RVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADIT 166
               +GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW+PDISC+ PADI 
Sbjct: 64  QCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIY 123

Query: 167 QDDGRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIE 226
           QD  RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGK+LRS V++QKYL +
Sbjct: 124 QDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLND 183

Query: 227 HPEYQTEGVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLE-SGEVYPISWARPDNS 286
           + EY  EGV +++FSFQ PKPLQ++YVRKR A +  S D +    + E  P++W  PD+ 
Sbjct: 184 NSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDH 243

Query: 287 TALQLGRPGLSELFPTAPVDNRASQPAKKAK 312
            +LQLG P  S L      +N   QP+KK K
Sbjct: 244 ISLQLGTPTESGL------NNSHYQPSKKKK 256

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BLAST of Cp4.1LG11g06750 vs. ExPASy Swiss-Prot
Match: Q9FZP6 (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.2e-36
Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 111 VQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAI 170
           VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SCN P D T  D   W  
Sbjct: 2   VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCD--TW-- 61

Query: 171 DKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGV 230
             P+I   P GW R +HIR E STKFADVYY  PSG+RLRS  ++Q +L  HPEY  EGV
Sbjct: 62  --PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGV 121

Query: 231 CMTRFSFQTPKPLQENYVRKR 252
             ++FSFQ PKPL +NYV+KR
Sbjct: 122 NRSQFSFQIPKPLDDNYVKKR 135

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BLAST of Cp4.1LG11g06750 vs. ExPASy Swiss-Prot
Match: Q9LYB9 (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.4e-24
Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 106 VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDG 165
           +  +  QC +C KWR+I ++E+YE+IR  +LE+PF C+     +  +SC +PADI  D  
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 84

Query: 166 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEY 225
           R W IDKP + + P G++R L +R + S    D YY  P+GK+LRS  +I  ++  +PE+
Sbjct: 85  RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 144

Query: 226 QTEGVCMTRFSFQTPKPLQE 246
           +     +  F+F  PK +++
Sbjct: 145 R--NAPLGDFNFTVPKVMED 156

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy Swiss-Prot
Match: Q5XEN5 (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-23
Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 106 VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDG 165
           +  F VQC  C KWR I T+++YE+IR  + E+PF+C+T    +  +SC D  D+  D  
Sbjct: 52  IDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKT----KEGVSCEDVGDLNYDSS 111

Query: 166 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEY 225
           R W IDKP + + P G++R L +R + S    D YYI P+GK+L+S  +I  ++  + +Y
Sbjct: 112 RTWVIDKPGLPRTPRGFKRSLILRKDYSK--MDAYYITPTGKKLKSRNEIAAFIDANQDY 171

Query: 226 QTEGVCMTRFSFQTPKPLQE 246
           +     +  F+F  PK ++E
Sbjct: 172 KY--ALLGDFNFTVPKVMEE 183

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy Swiss-Prot
Match: Q9Z2E1 (Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 GN=Mbd2 PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 5.9e-05
Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 179 PPGWQRLLHIRGEG-STKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSF 238
           PPGW++   IR  G S   +DVYY +PSGK+ RS   + +YL          V ++ F F
Sbjct: 159 PPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYL-------GNAVDLSSFDF 218

Query: 239 QT----PKPLQENYVRKRRANMN 257
           +T    P  LQ+N  R R   +N
Sbjct: 219 RTGKMMPSKLQKNKQRLRNDPLN 234

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BLAST of Cp4.1LG11g06750 vs. NCBI nr
Match: XP_023546682.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023546683.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 688 bits (1775), Expect = 9.21e-250
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240

Query: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300
           KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD
Sbjct: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300

Query: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK
Sbjct: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. NCBI nr
Match: XP_022929597.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022929598.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 686 bits (1771), Expect = 3.75e-249
Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240

Query: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300
           KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD
Sbjct: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300

Query: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           NR SQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK
Sbjct: 301 NRVSQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. NCBI nr
Match: XP_022996920.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita maxima] >XP_022996922.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 681 bits (1758), Expect = 3.60e-247
Identity = 337/341 (98.83%), Postives = 337/341 (98.83%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240

Query: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300
           KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNST LQLGRPGLSELFPTAPVD
Sbjct: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTGLQLGRPGLSELFPTAPVD 300

Query: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           NR SQPAKKAKRAV KEM SSLASTEPPDLSLERYFNEYKK
Sbjct: 301 NRVSQPAKKAKRAVTKEMHSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. NCBI nr
Match: KAG6598906.1 (Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 680 bits (1755), Expect = 1.03e-246
Identity = 338/341 (99.12%), Postives = 338/341 (99.12%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRP LLG LTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPQLLGQLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240

Query: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300
           KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD
Sbjct: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300

Query: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           NR SQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK
Sbjct: 301 NRVSQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. NCBI nr
Match: KAG7029864.1 (Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 674 bits (1740), Expect = 3.13e-244
Identity = 339/353 (96.03%), Postives = 339/353 (96.03%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLG LTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGQLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKY------------LIEHPEYQTE 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKY            LIEHPEYQTE
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYVALHCASHYLIYLIEHPEYQTE 240

Query: 241 GVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRP 300
           GVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRP
Sbjct: 241 GVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRP 300

Query: 301 GLSELFPTAPVDNRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           GLSELFPTAPVDNR SQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK
Sbjct: 301 GLSELFPTAPVDNRVSQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 353

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy TrEMBL
Match: A0A6J1EN70 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436133 PE=4 SV=1)

HSP 1 Score: 686 bits (1771), Expect = 1.82e-249
Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240

Query: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300
           KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD
Sbjct: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300

Query: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           NR SQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK
Sbjct: 301 NRVSQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy TrEMBL
Match: A0A6J1K3E0 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492010 PE=4 SV=1)

HSP 1 Score: 681 bits (1758), Expect = 1.74e-247
Identity = 337/341 (98.83%), Postives = 337/341 (98.83%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120
           SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVLRVGAFTVQCASCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240
           GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQTP 240

Query: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPVD 300
           KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNST LQLGRPGLSELFPTAPVD
Sbjct: 241 KPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTGLQLGRPGLSELFPTAPVD 300

Query: 301 NRASQPAKKAKRAVAKEMRSSLASTEPPDLSLERYFNEYKK 341
           NR SQPAKKAKRAV KEM SSLASTEPPDLSLERYFNEYKK
Sbjct: 301 NRVSQPAKKAKRAVTKEMHSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy TrEMBL
Match: A0A0A0LHE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1)

HSP 1 Score: 561 bits (1446), Expect = 6.31e-200
Identity = 284/343 (82.80%), Postives = 312/343 (90.96%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSSSE+ELHETRNENVQSQSN+N 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENVQSQSNDNP 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120
           SRELV+Y+PSA D+G A++PVSTPV+ Q  P+LGHLTPNSSRVL  VGAFTVQCA CFKW
Sbjct: 61  SRELVIYDPSA-DDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAR WRPDISC+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240
           PGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPV 300
           PKPL+E+YVRKRR NMNASCD SKLESGEV PISWARPD+STALQLG+PGL+EL  T+PV
Sbjct: 241 PKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQLGKPGLTELLSTSPV 300

Query: 301 DNRASQPAKKAKRAVAKEMR-SSLASTEPPDLSLERYFNEYKK 341
           +N  ++PAKK KRA+A+EMR SSL STEPP + LER F++Y+K
Sbjct: 301 NNPVTRPAKKVKRALAQEMRRSSLTSTEPPAIKLERCFDQYEK 342

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy TrEMBL
Match: A0A5D3CST2 (Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00130 PE=4 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 3.90e-196
Identity = 281/343 (81.92%), Postives = 308/343 (89.80%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSS E+ELHETRNENVQSQ NEN 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSS-ENELHETRNENVQSQPNENS 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120
           SRELV+YNPSA D G A++PV+TPV+ Q  PLLGHLTPNS+RVL  VGAFTVQCA CFKW
Sbjct: 61  SRELVIYNPSAKD-GRANDPVATPVKQQPSPLLGHLTPNSTRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAREWRPDI+C+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240
           PGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPV 300
           PKPL+E+YVRKRR N+NASCD SKLESGEV PISWARPD+STALQLG+PGL EL  T+PV
Sbjct: 241 PKPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPV 300

Query: 301 DNRASQPAKKAKRAVAKEMR-SSLASTEPPDLSLERYFNEYKK 341
           D+  ++PAKK KRA+ +EMR SSLASTEPP + LE  F++Y+K
Sbjct: 301 DHPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. ExPASy TrEMBL
Match: A0A1S3BR32 (methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103492271 PE=4 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 3.90e-196
Identity = 281/343 (81.92%), Postives = 308/343 (89.80%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSS E+ELHETRNENVQSQ NEN 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSS-ENELHETRNENVQSQPNENS 60

Query: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120
           SRELV+YNPSA D G A++PV+TPV+ Q  PLLGHLTPNS+RVL  VGAFTVQCA CFKW
Sbjct: 61  SRELVIYNPSAKD-GRANDPVATPVKQQPSPLLGHLTPNSTRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAREWRPDI+C+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240
           PGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPV 300
           PKPL+E+YVRKRR N+NASCD SKLESGEV PISWARPD+STALQLG+PGL EL  T+PV
Sbjct: 241 PKPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPV 300

Query: 301 DNRASQPAKKAKRAVAKEMR-SSLASTEPPDLSLERYFNEYKK 341
           D+  ++PAKK KRA+ +EMR SSLASTEPP + LE  F++Y+K
Sbjct: 301 DHPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of Cp4.1LG11g06750 vs. TAIR 10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73
Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0


Query: 47  TRNENVQSQSNENVSR---ELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRV 106
           +++  VQ  S+ N  R   +LV+Y+   ND+    E    PV+ Q         P SSR 
Sbjct: 4   SQSRAVQRSSSPNEDRGENQLVVYDLKGNDD---TEEEVLPVQSQ---------PLSSRT 63

Query: 107 L--RVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADIT 166
               +GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW+PDISC+ PADI 
Sbjct: 64  QCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIY 123

Query: 167 QDDGRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIE 226
           QD  RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGK+LRS V++QKYL +
Sbjct: 124 QDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLND 183

Query: 227 HPEYQTEGVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLE-SGEVYPISWARPDNS 286
           + EY  EGV +++FSFQ PKPLQ++YVRKR A +  S D +    + E  P++W  PD+ 
Sbjct: 184 NSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDH 243

Query: 287 TALQLGRPGLSELFPTAPVDNRASQPAKKAK 312
            +LQLG P  S L      +N   QP+KK K
Sbjct: 244 ISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Cp4.1LG11g06750 vs. TAIR 10
Match: AT5G35330.2 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73
Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0


Query: 47  TRNENVQSQSNENVSR---ELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRV 106
           +++  VQ  S+ N  R   +LV+Y+   ND+    E    PV+ Q         P SSR 
Sbjct: 4   SQSRAVQRSSSPNEDRGENQLVVYDLKGNDD---TEEEVLPVQSQ---------PLSSRT 63

Query: 107 L--RVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADIT 166
               +GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW+PDISC+ PADI 
Sbjct: 64  QCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIY 123

Query: 167 QDDGRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIE 226
           QD  RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGK+LRS V++QKYL +
Sbjct: 124 QDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLND 183

Query: 227 HPEYQTEGVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLE-SGEVYPISWARPDNS 286
           + EY  EGV +++FSFQ PKPLQ++YVRKR A +  S D +    + E  P++W  PD+ 
Sbjct: 184 NSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDH 243

Query: 287 TALQLGRPGLSELFPTAPVDNRASQPAKKAK 312
            +LQLG P  S L      +N   QP+KK K
Sbjct: 244 ISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Cp4.1LG11g06750 vs. TAIR 10
Match: AT5G35330.3 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73
Identity = 146/271 (53.87%), Postives = 186/271 (68.63%), Query Frame = 0


Query: 47  TRNENVQSQSNENVSR---ELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRV 106
           +++  VQ  S+ N  R   +LV+Y+   ND+    E    PV+ Q         P SSR 
Sbjct: 4   SQSRAVQRSSSPNEDRGENQLVVYDLKGNDD---TEEEVLPVQSQ---------PLSSRT 63

Query: 107 L--RVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADIT 166
               +GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW+PDISC+ PADI 
Sbjct: 64  QCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIY 123

Query: 167 QDDGRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIE 226
           QD  RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGK+LRS V++QKYL +
Sbjct: 124 QDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLND 183

Query: 227 HPEYQTEGVCMTRFSFQTPKPLQENYVRKRRANMNASCDGSKLE-SGEVYPISWARPDNS 286
           + EY  EGV +++FSFQ PKPLQ++YVRKR A +  S D +    + E  P++W  PD+ 
Sbjct: 184 NSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAKEANPLAWISPDDH 243

Query: 287 TALQLGRPGLSELFPTAPVDNRASQPAKKAK 312
            +LQLG P  S L      +N   QP+KK K
Sbjct: 244 ISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Cp4.1LG11g06750 vs. TAIR 10
Match: AT5G35338.2 (methyl-CPG-binding domain 12 )

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-37
Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 111 VQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAI 170
           VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SCN P D T  D   W  
Sbjct: 2   VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCD--TW-- 61

Query: 171 DKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGV 230
             P+I   P GW R +HIR E STKFADVYY  PSG+RLRS  ++Q +L  HPEY  EGV
Sbjct: 62  --PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGV 121

Query: 231 CMTRFSFQTPKPLQENYVRKR 252
             ++FSFQ PKPL +NYV+KR
Sbjct: 122 NRSQFSFQIPKPLDDNYVKKR 135

[Close]

BLAST of Cp4.1LG11g06750 vs. TAIR 10
Match: AT3G63030.1 (methyl-CPG-binding domain 4 )

HSP 1 Score: 112.8 bits (281), Expect = 5.3e-25
Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 106 VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDG 165
           +  +  QC +C KWR+I ++E+YE+IR  +LE+PF C+     +  +SC +PADI  D  
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 84

Query: 166 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEY 225
           R W IDKP + + P G++R L +R + S    D YY  P+GK+LRS  +I  ++  +PE+
Sbjct: 85  RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 144

Query: 226 QTEGVCMTRFSFQTPKPLQE 246
           +     +  F+F  PK +++
Sbjct: 145 R--NAPLGDFNFTVPKVMED 156

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g06750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LA53	1.2e-71	53.87	Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FZP6	2.2e-36	53.90	Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYB9	7.4e-24	37.14	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q5XEN5	1.3e-23	37.14	Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9Z2E1	5.9e-05	37.35	Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 GN=Mbd2 PE=2 SV=2	[more]

BLAST of Cp4.1LG11g06750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546682.1	9.21e-250	100.00	methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]...	[more]
XP_022929597.1	3.75e-249	99.71	methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022...	[more]
XP_022996920.1	3.60e-247	98.83	methyl-CpG-binding domain-containing protein 2-like [Cucurbita maxima] >XP_02299...	[more]
KAG6598906.1	1.03e-246	99.12	Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma ...	[more]
KAG7029864.1	3.13e-244	96.03	Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma ...	[more]

BLAST of Cp4.1LG11g06750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN70	1.82e-249	99.71	methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1K3E0	1.74e-247	98.83	methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A0A0LHE0	6.31e-200	82.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1	[more]
A0A5D3CST2	3.90e-196	81.92	Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BR32	3.90e-196	81.92	methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Cp4.1LG11g06750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35330.1	8.9e-73	53.87	methyl-CPG-binding domain protein 02	[more]
AT5G35330.2	8.9e-73	53.87	methyl-CPG-binding domain protein 02	[more]
AT5G35330.3	8.9e-73	53.87	methyl-CPG-binding domain protein 02	[more]
AT5G35338.2	1.6e-37	53.90	methyl-CPG-binding domain 12	[more]
AT3G63030.1	5.3e-25	37.14	methyl-CPG-binding domain 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 172..249 e-value: 3.6E-8 score: 43.1
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 179..240 e-value: 1.6E-10 score: 40.5
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 168..242 score: 17.255947
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 109..159 e-value: 1.6E-12 score: 47.2
IPR011124	Zinc finger, CW-type	PROSITE	PS51050	ZF_CW	coord: 103..162 score: 12.520239
None	No IPR available	GENE3D	3.30.40.100		coord: 107..159 e-value: 1.6E-6 score: 29.5
None	No IPR available	GENE3D	3.30.890.10		coord: 160..267 e-value: 2.9E-19 score: 71.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	PANTHER	PTHR12396	METHYL-CPG BINDING PROTEIN, MBD	coord: 21..288
None	No IPR available	PANTHER	PTHR12396:SF45	OS06G0702100 PROTEIN	coord: 21..288
None	No IPR available	CDD	cd01396	MeCP2_MBD	coord: 172..251 e-value: 3.14658E-26 score: 97.8284
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 147..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g06750.1	Cp4.1LG11g06750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding