Cp4.1LG11g02460.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGTGTCAATCGCAAATATTTGATGTAATTTAATGTATTAAACTCCCCCACGCATAACGCTCTTAATTATTTGTTTTATTATATAGTTTGCTTCACATATTATTTGCTAGGTTCATTCACGATAGGCAAGAAAATAATAATTATTATAAACTATAAATACGATATATCACGAAACGAGAAATAGAGGAGAATTTGAGTGGTGGGCCTTGAAACTCGTCACCTTTTTGGGATATAAAAATGGGCCTTTTCCACCCACCATTTCTCCCTGCACCCACATCGTCTCTTCTTTCTCTCTCTCTTTCTCTTAATAATTTTGCAAAAATAAGAAAAATGGAAGTGGAGCGGCGAGAGGCAGAGATACACCGTACGGCGGCGGTTGAGGCGGAGGTGGAATCGAGGTTCCGTCGTATCTGCGTGTTCTGCGGCAGCAGCTCCGGCAAGAATCCGAGCTATCAAATTGCCGCAATTCAACTCGGAAAGCAACTGGTATTTTAATTGTTCTTTTTTTTTTTTTAATTTCTTTCTTTAATTCTTCGAAATTTAGAAACAATCAGAGAAAAAAGATGAACAAATCGAAGAATCTGAAGTTTGAATTTCGAAATTCACACGTGTGAAATTGAAAACGCAGGTCGAAAGGAACATTGACCTTGTTTATGGCGGAGGAAGCATTGGGCTTATGGGCTTGGTTTCTCAAGCCGTCTACGACGGCGGACGCCACGTGTTAGGGTATCATTGGTTCTCTCATCTTCTCTCCCATCTCTCTCTCTCTCTTTCTCTCTTAGTTTTATTCAATTTGGGTTTGTTTTATTGCAGAGTGATCCCAAAATCTCTCATGCCAAGAGAGGTAATTAAAATTTCTTTTTTTTTTAATAAAAAAAAATAAAATTGTAATTAATTAATTATTTTATTTATTTATATATATTTTTTCAGATCACTGGAGAGACAATTGGAGAAGTGAGAGCTGTATCTGGAATGCACCAACGCAAAGCTGAGATGGCGCGTCAAGCGGATGCATTTATTGCCTTGCCTGGTACTTCTATTTCTTCCTATTTACATTTTCGCCCCTAATTTTTTTCTTTTTACAAAAATTGGACTTTATTAATACAATTTTTAATTTACAAGTAAATTATTTAACATTTTTTCACTGACAGGTGGCTACGGAACATTGGAGGAACTGTTGGAAGTCATCACTTGGGCTCAATTGGGCATCCACGAAAAGCCGGTACAAATAAATAAATTAATTAATTAATTTAAAGATAAGTAAATAAAAGCTTTAATTTAATTAAAATAAATAAATAAATATTACAGGTAGGGTTGCTGAACGTGGATGGGTATTACAACTCGCTCTTGTCGTTCATTGACAAAGCAGTTGACGAAGGCTTCGTGTCACCAGCTGCCCGTAGCATCATCGTTTCTGCCCAAACTGCCCATGAGCTCATCTCCAAGCTAGAGGTCAATCCACTAATCTATTATAATATTTTTGAGTTTGGAAGGATTTTAAAATATTCGTAAAAAGTCAATAGTAATATCGAATTTTTTTTTTAATAATCGAAATATTTCATAACGCTTCTTTTTTAGGGTCCAACTCAATCATGTAATTATATCTATCAATTTTCATTTGTGAACAGGAGTACGTCCCAAAGCATTCCAGCGTAGCGAAACTGAGCTGGGAAATGGATCAACAACTCGGTTATACAACAAAGTCAGACATTTCTCGTTGACCTTAGTGACAGTATATGTATAGATTAATCATTGTAGATCGAATTATGATTGTAGTATTGGTTTGTAATATCTGTAAAAAAAAATATTGCCGATTGATTTGTTTGATAGGAAGCTGATTAGGTCAATAGTGAGTTATGTAAGCGATTATATTGTAGCATTTTTCCACGTCGGTGATGATATTAAATTAATAACTATATTTATAAA ATGTGGGTCAGCTCCGGCAAGAATCCGAGCTATCAAATTGCCGCAATTCAACTCGGAAAGCAACTGGTCGAAAGGAACATTGACCTTGTTTATGGCGGAGGAAGCATTGGGCTTATGGGCTTGGTTTCTCAAGCCGTCTACGACGGCGGACGCCACGTGTTAGGAGTGATCCCAAAATCTCTCATGCCAAGAGAGATCACTGGAGAGACAATTGGAGAAGTGAGAGCTGTATCTGGAATGCACCAACGCAAAGCTGAGATGGCGCGTCAAGCGGATGCATTTATTGCCTTGCCTGGTGGCTACGGAACATTGGAGGAACTGTTGGAAGTCATCACTTGGGCTCAATTGGGCATCCACGAAAAGCCGGTAGGGTTGCTGAACGTGGATGGGTATTACAACTCGCTCTTGTCGTTCATTGACAAAGCAGTTGACGAAGGCTTCGTGTCACCAGCTGCCCGTAGCATCATCGTTTCTGCCCAAACTGCCCATGAGCTCATCTCCAAGCTAGAGGAGTACGTCCCAAAGCATTCCAGCGTAGCGAAACTGAGCTGGGAAATGGATCAACAACTCGGTTATACAACAAAGTCAGACATTTCTCGTTGACCTTAGTGACAGTATATGTATAGATTAATCATTGTAGATCGAATTATGATTGTAGTATTGGTTTGTAATATCTGTAAAAAAAAATATTGCCGATTGATTTGTTTGATAGGAAGCTGATTAGGTCAATAGTGAGTTATGTAAGCGATTATATTGTAGCATTTTTCCACGTCGGTGATGATATTAAATTAATAACTATATTTATAAA ATGTGGGTCAGCTCCGGCAAGAATCCGAGCTATCAAATTGCCGCAATTCAACTCGGAAAGCAACTGGTCGAAAGGAACATTGACCTTGTTTATGGCGGAGGAAGCATTGGGCTTATGGGCTTGGTTTCTCAAGCCGTCTACGACGGCGGACGCCACGTGTTAGGAGTGATCCCAAAATCTCTCATGCCAAGAGAGATCACTGGAGAGACAATTGGAGAAGTGAGAGCTGTATCTGGAATGCACCAACGCAAAGCTGAGATGGCGCGTCAAGCGGATGCATTTATTGCCTTGCCTGGTGGCTACGGAACATTGGAGGAACTGTTGGAAGTCATCACTTGGGCTCAATTGGGCATCCACGAAAAGCCGGTAGGGTTGCTGAACGTGGATGGGTATTACAACTCGCTCTTGTCGTTCATTGACAAAGCAGTTGACGAAGGCTTCGTGTCACCAGCTGCCCGTAGCATCATCGTTTCTGCCCAAACTGCCCATGAGCTCATCTCCAAGCTAGAGGAGTACGTCCCAAAGCATTCCAGCGTAGCGAAACTGAGCTGGGAAATGGATCAACAACTCGGTTATACAACAAAGTCAGACATTTCTCGTTGA MWVSSGKNPSYQIAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKSLMPREITGETIGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHEKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPAARSIIVSAQTAHELISKLEEYVPKHSSVAKLSWEMDQQLGYTTKSDISR Homology
BLAST of Cp4.1LG11g02460.1 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 7.8e-82 Identity = 151/193 (78.24%), Postives = 172/193 (89.12%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 302.4 bits (773), Expect = 3.9e-81 Identity = 152/197 (77.16%), Postives = 171/197 (86.80%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 8.6e-81 Identity = 150/198 (75.76%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 7.3e-80 Identity = 149/186 (80.11%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.6e-79 Identity = 150/198 (75.76%), Postives = 170/198 (85.86%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. NCBI nr
Match: XP_023547200.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 387 bits (993), Expect = 8.19e-135 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. NCBI nr
Match: KAG7029429.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387 bits (993), Expect = 8.19e-135 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. NCBI nr
Match: KAG6598493.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 386 bits (992), Expect = 1.16e-134 Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. NCBI nr
Match: XP_022996989.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Cucurbita maxima]) HSP 1 Score: 385 bits (989), Expect = 3.33e-134 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. NCBI nr
Match: XP_022961665.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Cucurbita moschata]) HSP 1 Score: 384 bits (987), Expect = 6.73e-134 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy TrEMBL
Match: A0A6J1KA77 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111492054 PE=3 SV=1) HSP 1 Score: 385 bits (989), Expect = 1.61e-134 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy TrEMBL
Match: A0A6J1HCY0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111462366 PE=3 SV=1) HSP 1 Score: 384 bits (987), Expect = 3.26e-134 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy TrEMBL
Match: A0A5A7VAH4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005100 PE=3 SV=1) HSP 1 Score: 367 bits (942), Expect = 2.52e-127 Identity = 188/198 (94.95%), Postives = 193/198 (97.47%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy TrEMBL
Match: A0A1S3BBX4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103488033 PE=3 SV=1) HSP 1 Score: 367 bits (942), Expect = 2.52e-127 Identity = 188/198 (94.95%), Postives = 193/198 (97.47%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. ExPASy TrEMBL
Match: A0A6J1CSM3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111013936 PE=3 SV=1) HSP 1 Score: 365 bits (938), Expect = 9.90e-127 Identity = 187/198 (94.44%), Postives = 192/198 (96.97%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 304.7 bits (779), Expect = 5.6e-83 Identity = 151/193 (78.24%), Postives = 172/193 (89.12%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 302.4 bits (773), Expect = 2.8e-82 Identity = 152/197 (77.16%), Postives = 171/197 (86.80%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 301.2 bits (770), Expect = 6.1e-82 Identity = 150/198 (75.76%), Postives = 176/198 (88.89%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 298.1 bits (762), Expect = 5.2e-81 Identity = 149/186 (80.11%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Cp4.1LG11g02460.1 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 288.9 bits (738), Expect = 3.2e-78 Identity = 150/217 (69.12%), Postives = 171/217 (78.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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