Cp4.1LG08g00560.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g00560.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	GRF1-interacting factor 3-like
Location	Cp4.1LG08: 4056707 .. 4060600 (-)
Sequence length	1931
RNA-Seq Expression	Cp4.1LG08g00560.1
Synteny	Cp4.1LG08g00560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTAATTTTATTATTTAATTTTCTTGTCCTATTCACACTTTTCCCCATTTGTTTTTGTGGGATTTTTCTTTCTTCTTCCTCCCGTCCTTCCCTTTTCTTTGAACATCCGAGCGCCGTACCGGAGATTCTCCCTCGAATCCGATCTCAAGGAGCTTCCTTTTGAACGATTACCAGGTTCTTTCTCTCTTCTTGCCTTTCGATCTTCCTCTGTTTCTCCGCCTTCTCTTCTCAATCTCTGTTGACTTTGGAAATTTCTTTTCCGAGAGTTAGGGCTAGGGTTTATATTCAGGAAAGCTAAAGATGCAGCAACCACCGCAAATGATGCCGATGATGCCTTCATTTCCCCCCACCAATATCACTTCCGAGCAGATTCAAAAGGCATTGTCCTTCTCTTTCTCTTTCTTCTTTAAATCTTAAACGCTTATTTATGATGTGTTTGATTTGATGGAGCTCTGTTTATCGCCGTGGATGTGATTTTGAAATGCAACTGCTTTTGTTCTTCATAAGTTAATAGCTCTTACATGAATGACTCCTTTAATGACTGGATGTTTGCAGACGGAAAGAAGCAAGTAGGCCCCTTGATGGGAGTATTATTTTAGGGATGTTGCAGTAGTTGGAGACCATTATATAATTATTTTTTAACCCTTTTCACAGACTATCTGAATCTCTAGGTTTGCAGTTGATTTTTTTTTTTTTTTTTCTTTAGACGAACATGGGGGGAACATATGTCGGTTCACTCATTCTTCTTTTTCTATGAGCTTGTATTATTATTCATCTCTTGTTAATTAGGGCAAGTGGTTATTGTTCTTGCTTAATTGAAATGTGCCATGATGGACTAATGTCTTCAATTGAGAATTGATAATGACAAGGTAATTTGAAATCAATATATTTAACTGAATAAACTAATATGGATTTAGTTAAGTGCTCAAGATCAGATCCTTGTTATCATGTTTGAGTTAAAGTTATCAACAACGAATACTTTTTACTGCGTGCAGTATCTGGATGAGAACAAAAAGTTGATATTGGCCATACTTGACAACCAAAATCTGGGGAAACTTAACGAATGTGCTCAGTAAGTTGTTGTGTATGGTTTTGATTCTCTCTATATGCGCTTCTACCTTTGTTTATGGAGTCCACGAAGTTGTTGCATTGATTTTATGTAAATTTCCTGTGGTACTAAAAACATATAGTTCAAAGTGGTTTGTGTCATGTATATAAGTAGTTGATTTACTCACGACTAGCAGATAGTGTCCTCTTTTGGCTTTCCCTTCCGGGCTTCCCCCAAGGTTTTTAAAACACGTCACTAGGGAAAGCTTTCCACCCCCTTATAAAGAATGTTTCATTCTCCTCCTCAACCAATGTGGGATCTCACAATCCACCCCCCTTTGGGGCCTAGCTTCTTTATTGGCACTTGTTCCCTTCTCCAATCGATGTGGGACCCCAATCCACCCCCCTTCAAGGCCCAATGTCATTTCTGGCACACTGTCTCGTGTCCATTCCCCTTTGGGGTTCTGTCTCTAGCTAGCACGTCGTCCGGTGTCTGGTTCTGATACCATTTGTAACGGCCCAAGCCTACCGCTAACAAATATTGTCTTCTTTGGGTTTTTCCTTTCGGGCTTTCCCTCAAGGTTTTTTAAACGCGTCTGTTAGGGAGAGGTTTCCATACCCTTATAAAGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACATTTACCTTGCATGTTATTTGAAAGTAAGGATTATGAATCTTGAAATTCATGAGCTGAGGGGTCTCTGGGTGCTGGCTTCTACACTATAAATCTTGCTTCTATTGCTGCATTTTTTAGTTAGGTATCTAGATCGAGTTTGCATTTCACAGACTGAACTCTCTTTTGCAATCTATTTCACATATTAATGAAATGGTCTTTGTTCCGATCAAGTATGCGTTTCTTATCTAAAATGAGATCAAATATGTGCTTCAAAATTGATATAAGGTAGTACATTTGTGAATATTTCGAGTCAAGTACGGTACAATCCTTTTTAATTTTTGATAGGTTTACATCATTTGCATCCTTTGTTATGCAATCATGTGCCTTTGTGTTTATATGGACTGCTAAAGTGTTGTATTTTCTAAAACTATTTGTCTTACATGGCTTTCGATTTCCCCACATGTATTTTACTTGAGTTCAATTTCGTCCCCATGTACTTGTAGTGTGCATGAGCTTGTACTTGAGTTAATACAATTCTCGTAATTAGGTACCAAGCCCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCAGCTATGCCTCCACAGGTTGGTAATTAATTAGGCCTCTGCTTCCCCTAAATTGATGTTGTATTGTACGTCGTTCTTACCTGTGTTAGAATGGTCAGATGGCTCCACATCCTGCAATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATAATGGCACAGCAATCAGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTCGGAAACCCTCATCAATTACAGGATCCACAACAGCAGATACACCAGCAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATGGGAGGGGCCAACAATGGCATGCATCACCCACACCATCCCGAGGGGACCCTTGGGGGTGCTGGTGCTGGAGGGCCTGCTCGAAGTTCCGGGCAAACCGATGCCCGTGGAGGTGGCAAGCAGGACTCTGGTGATGTGGGAGGTGCTGATGGTCAGGGGAGCTCAGCTGCTGGTCGGGGTGGCGATGGAGAGGAAACTAAGTAATGTAGCCTGACGACTGTTTCCACATTCACATGTGGCTGTTAATAGTAGGTGCTTCGTACGGTAGAACTTCCATGCTCTGGTGATATTAGTAGATTGAGCGAAGAACCCAAAGTTCTCAGTTTTAGTTTAAGCAAAATGTCTAGGTAATTCGCGTTATTAGAGTCTTGGCATGCAGTTGAATTCCATACTTGGTAATAGAAGGCAGACGTAGTTTGAAGAGGCAGTGGTGGACTGGTAGAGATCAGTTCCACTTTTATCCCATTTTGTAAACAACTTTCTAAGGATCGGTAGGATTTTAGAATATACTTCTACCGAAGGTTTTCTAGCAATCTGTTCTTCAACTGACTTCAAACTTTTGAATGCAATGGAAAGTTGTTCAACAATGATTCCACAATTACGAGAGAAACAAGACTGTAAATGTAGTTTCTAGCTATAGAGCTCTAAACCACTCGCTTGTTACAGAAACTTTTGACATTTATCCAATTCCAACCAGTTAAAATCAAACACTCATCTGTTTCATTACATCTGTTTACACAAATCCCAGCAAAGCCTAAGCAATATATGAACCCTTCCTTAGCAGTCAGCACTTCCCTAGTACGTACATGTTACAACTCCTAAACTTCTACTCTTCTTAGTTGATTTACTCAGCTGAAATACAGGGTGCCTGCATAGCTTCCTCACCCCTTTTCTCAAACTTAGCCACTCACTTGTTTCACATCCATATCTGGTTGGAGTGCTCCCAGAAGCTGAATGGTATTGCTCTTCTTCTTCTTCTTCTTTCTCTTCAAAGCTTTCATACTTTCCTCCATAAGTGTAGTCAGCGCTATCTAAGCTGTTACATCTTGCATTATTGCTTGCAGTGGAATCGATAGCATTTGGCAGTTTCGTGGAGGATTCACCAATGGTTGAGTTTGAAGATTTTGTGTTAGTATTGTGGTTGGGAGGATCCAAGCAAGAGGACTGCTGGTTGGCCTCTGATTCTTCCCTTCCTTGGAGGATCTTAAGAATAAGGACCTTTAACAAGTTCATTACTTGTACAGCATGAATTAATGCAGTCAAGGGATCAGCCATCTGCAACAAATTA

mRNA sequence

CTGTAATTTTATTATTTAATTTTCTTGTCCTATTCACACTTTTCCCCATTTGTTTTTGTGGGATTTTTCTTTCTTCTTCCTCCCGTCCTTCCCTTTTCTTTGAACATCCGAGCGCCGTACCGGAGATTCTCCCTCGAATCCGATCTCAAGGAGCTTCCTTTTGAACGATTACCAGGGCTAGGGTTTATATTCAGGAAAGCTAAAGATGCAGCAACCACCGCAAATGATGCCGATGATGCCTTCATTTCCCCCCACCAATATCACTTCCGAGCAGATTCAAAAGTATCTGGATGAGAACAAAAAGTTGATATTGGCCATACTTGACAACCAAAATCTGGGGAAACTTAACGAATGTGCTCAGTACCAAGCCCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCAGCTATGCCTCCACAGATGGCTCCACATCCTGCAATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATAATGGCACAGCAATCAGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTCGGAAACCCTCATCAATTACAGGATCCACAACAGCAGATACACCAGCAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATGGGAGGGGCCAACAATGGCATGCATCACCCACACCATCCCGAGGGGACCCTTGGGGGTGCTGGTGCTGGAGGGCCTGCTCGAAGTTCCGGGCAAACCGATGCCCGTGGAGGTGGCAAGCAGGACTCTGGTGATGTGGGAGGTGCTGATGGTCAGGGGAGCTCAGCTGCTGGTCGGGGTGGCGATGGAGAGGAAACTAAGTAATGTAGCCTGACGACTGTTTCCACATTCACATGTGGCTGTTAATAGTAGGTGCTTCGTACGGTAGAACTTCCATGCTCTGGTGATATTAGTAGATTGAGCGAAGAACCCAAAGTTCTCAGTTTTAGTTTAAGCAAAATGTCTAGGTAATTCGCGTTATTAGAGTCTTGGCATGCAGTTGAATTCCATACTTGGTAATAGAAGGCAGACGTAGTTTGAAGAGGCAGTGGTGGACTGGTAGAGATCAGTTCCACTTTTATCCCATTTTGTAAACAACTTTCTAAGGATCGGTAGGATTTTAGAATATACTTCTACCGAAGGTTTTCTAGCAATCTGTTCTTCAACTGACTTCAAACTTTTGAATGCAATGGAAAGTTGTTCAACAATGATTCCACAATTACGAGAGAAACAAGACTGTAAATGTAGTTTCTAGCTATAGAGCTCTAAACCACTCGCTTGTTACAGAAACTTTTGACATTTATCCAATTCCAACCAGTTAAAATCAAACACTCATCTGTTTCATTACATCTGTTTACACAAATCCCAGCAAAGCCTAAGCAATATATGAACCCTTCCTTAGCAGTCAGCACTTCCCTAGTACGTACATGTTACAACTCCTAAACTTCTACTCTTCTTAGTTGATTTACTCAGCTGAAATACAGGGTGCCTGCATAGCTTCCTCACCCCTTTTCTCAAACTTAGCCACTCACTTGTTTCACATCCATATCTGGTTGGAGTGCTCCCAGAAGCTGAATGGTATTGCTCTTCTTCTTCTTCTTCTTTCTCTTCAAAGCTTTCATACTTTCCTCCATAAGTGTAGTCAGCGCTATCTAAGCTGTTACATCTTGCATTATTGCTTGCAGTGGAATCGATAGCATTTGGCAGTTTCGTGGAGGATTCACCAATGGTTGAGTTTGAAGATTTTGTGTTAGTATTGTGGTTGGGAGGATCCAAGCAAGAGGACTGCTGGTTGGCCTCTGATTCTTCCCTTCCTTGGAGGATCTTAAGAATAAGGACCTTTAACAAGTTCATTACTTGTACAGCATGAATTAATGCAGTCAAGGGATCAGCCATCTGCAACAAATTA

Coding sequence (CDS)

ATGCAGCAACCACCGCAAATGATGCCGATGATGCCTTCATTTCCCCCCACCAATATCACTTCCGAGCAGATTCAAAAGTATCTGGATGAGAACAAAAAGTTGATATTGGCCATACTTGACAACCAAAATCTGGGGAAACTTAACGAATGTGCTCAGTACCAAGCCCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCAGCTATGCCTCCACAGATGGCTCCACATCCTGCAATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATAATGGCACAGCAATCAGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTCGGAAACCCTCATCAATTACAGGATCCACAACAGCAGATACACCAGCAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATGGGAGGGGCCAACAATGGCATGCATCACCCACACCATCCCGAGGGGACCCTTGGGGGTGCTGGTGCTGGAGGGCCTGCTCGAAGTTCCGGGCAAACCGATGCCCGTGGAGGTGGCAAGCAGGACTCTGGTGATGTGGGAGGTGCTGATGGTCAGGGGAGCTCAGCTGCTGGTCGGGGTGGCGATGGAGAGGAAACTAAGTAA

Protein sequence

MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTDARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK

Homology

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BLAST of Cp4.1LG08g00560.1 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.9e-52
Identity = 143/231 (61.90%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NIT+EQIQKYLDENKKLI+AIL+NQNLGKL ECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQIHQQHQQAMQGQMGLRPMG-GANNGMHHP-HHPEGTL 180
           G+FPP+ PLQFG+PHQ  DPQQQ+   HQQAMQG MG+RPMG   NNG+ H  HH E  L
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GGAGAGGPARSSGQTDARGGGKQDSGDV--GGADGQGSSAAGRGGDGEETK 214
                   A ++G  DA GGGK D  ++   GADGQG SAA  GG   +T+
Sbjct: 181 A-------ANNAGPNDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTE 221

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.9e-46
Identity = 127/209 (60.77%), Postives = 140/209 (66.99%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NIT+EQIQKYLDENKKLI+AI++NQNLGKL ECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHP-HHPEGTLGGAGAG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RPMG  NNGM H    PE  LGG    
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGG---- 183

Query: 182 GPARSSGQTDARGGGKQDSGDVGGADGQG 200
                        GGKQD     GADGQG
Sbjct: 184 --------NVGLRGGKQD-----GADGQG 190

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 89/207 (43.00%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 16  PTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKNLMYLAAIADAQPQAP 75
           PT +T++ IQ+YLDENK+LILAILDNQN GK+ ECA+ QA+LQ NLMYLAAIAD+QP   
Sbjct: 20  PTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQT 79

Query: 76  AMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQIHQQHQ 135
           A   Q   +  MQ G  YM    A +MA QS L   +  + +  P     P QQ  QQ  
Sbjct: 80  AAMSQYPSNLMMQSGARYMPQQSAQMMAPQS-LMAARSSMMYAQP--ALSPLQQQQQQQA 139

Query: 136 QAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQT---------DARGGGK 195
            A  GQ+G+   GG  +G     H E ++GG G GG A +S               GGGK
Sbjct: 140 AAAHGQLGM-GSGGTTSGF-SILHGEASMGGGGGGGGAGNSMMNAGVFSDFGRGGGGGGK 199

Query: 196 QDSGDVGGADGQGSSAAGRGGDGEETK 214
           + S  +   D +G+++  + GDGE  K
Sbjct: 200 EGSTSL-SVDVRGANSGAQSGDGEYLK 220

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.2e-21
Identity = 85/215 (39.53%), Postives = 114/215 (53.02%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+TS+ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQIHQQHQQAMQGQMGLRPM--GGANNGMHHPHHPEGTLGGAGAGGPARSSG 185
             Q Q P   +  QHQQ    Q+G+     GG ++G+H      G     G G P   SG
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG 186

Query: 186 QTDARGGGKQDSGDVGGADGQGSSAAGRGGDGEET 213
                          GG +G+G    G  GDG ET
Sbjct: 187 ---------------GGGEGRG----GSSGDGGET 200

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-16
Identity = 89/223 (39.91%), Postives = 115/223 (51.57%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQ    MM    S  P  +T++ IQ+YLDENK+LILAILDNQN GK  EC ++QA+LQ N
Sbjct: 7   MQMNQNMMGGYTS--PAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQHN 66

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIAD+QP   A   Q   +  MQ G  YM  PQ+  M     L   +  + + +P
Sbjct: 67  LMYLAAIADSQPPQTAPLSQYPSNLMMQPGPRYMP-PQSGQMMNPQSLMAARSSMMYAHP 126

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRP--MGGANNGMHHPHHPEGTLGGAGAGGPARS--- 180
                P QQ     QQA  GQ+G+ P   GG         H E ++GG GAG  A +   
Sbjct: 127 S--LSPLQQ-----QQAAHGQLGMAPGGGGGGTTSGFSILHGEASMGGGGAGAGAGNNMM 186

Query: 181 -----SGQTDARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 214
                SG   +  G K+ S  +      G+S+  + GDGE  K
Sbjct: 187 NAGMFSGFGRSGSGAKEGSTSLSVDVRGGTSSGAQSGDGEYLK 219

[Close]

BLAST of Cp4.1LG08g00560.1 vs. NCBI nr
Match: XP_022974833.1 (GRF1-interacting factor 3-like [Cucurbita maxima] >XP_022975274.1 GRF1-interacting factor 3-like [Cucurbita maxima] >XP_023540251.1 GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406 bits (1043), Expect = 1.81e-142
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD
Sbjct: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180

Query: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213
           ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK
Sbjct: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213

[Close]

BLAST of Cp4.1LG08g00560.1 vs. NCBI nr
Match: XP_022928756.1 (GRF1-interacting factor 3-like [Cucurbita moschata])

HSP 1 Score: 404 bits (1039), Expect = 7.35e-142
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGP RSSGQTD
Sbjct: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPVRSSGQTD 180

Query: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213
           ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK
Sbjct: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213

[Close]

BLAST of Cp4.1LG08g00560.1 vs. NCBI nr
Match: KAG6597050.1 (GRF1-interacting factor 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 403 bits (1035), Expect = 2.99e-141
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD
Sbjct: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180

Query: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213
           ARGGGKQDSGDVGGADGQGSSAAGRGGD EETK
Sbjct: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDREETK 213

[Close]

BLAST of Cp4.1LG08g00560.1 vs. NCBI nr
Match: KAG7028524.1 (GRF1-interacting factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397 bits (1021), Expect = 4.54e-139
Identity = 212/216 (98.15%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQ---MAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120
           LMYLAAIADAQPQAPAMPPQ   MAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF
Sbjct: 61  LMYLAAIADAQPQAPAMPPQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120

Query: 121 GNPHQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSG 180
           GNPHQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSG
Sbjct: 121 GNPHQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSG 180

Query: 181 QTDARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213
           QTDARGGGKQDSGDVGGADGQGSSAAGRGGD EETK
Sbjct: 181 QTDARGGGKQDSGDVGGADGQGSSAAGRGGDREETK 216

[Close]

BLAST of Cp4.1LG08g00560.1 vs. NCBI nr
Match: XP_023550144.1 (GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo] >XP_023550145.1 GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370 bits (949), Expect = 4.43e-128
Identity = 199/217 (91.71%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNIT+EQIQKYLDENKKLILAILDNQNLGKL ECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPA+QQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAIQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQD QQQ+HQQHQQAMQGQMGLRP+GGANNGMHHPHH EGTLGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSGDVGG--ADGQGSSAAGRGG--DGEETK 213
            RGGGKQDS DVGG  ADGQG+SA GRGG  DGEE K
Sbjct: 181 GRGGGKQDSADVGGTGADGQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy TrEMBL
Match: A0A6J1IK03 (GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474408 PE=3 SV=1)

HSP 1 Score: 406 bits (1043), Expect = 8.74e-143
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD
Sbjct: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180

Query: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213
           ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK
Sbjct: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy TrEMBL
Match: A0A6J1EL72 (GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111435274 PE=3 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 3.56e-142
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGP RSSGQTD
Sbjct: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPVRSSGQTD 180

Query: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213
           ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK
Sbjct: 181 ARGGGKQDSGDVGGADGQGSSAAGRGGDGEETK 213

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy TrEMBL
Match: A0A6J1FN71 (GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=3 SV=1)

HSP 1 Score: 369 bits (947), Expect = 4.33e-128
Identity = 199/217 (91.71%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNIT+EQIQKYLDENKKLILAILDNQNLGKL ECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQD QQQ+HQQHQQAMQGQMGLRP+GGANNGMHHPHH EGTLGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSGDVGG--ADGQGSSAAGRGG--DGEETK 213
            RGGGKQDS DVGG  AD QG+SA GRGG  DGEE K
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy TrEMBL
Match: A0A0A0K7M8 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 SV=1)

HSP 1 Score: 369 bits (947), Expect = 4.33e-128
Identity = 199/217 (91.71%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNIT+EQIQKYLDENKKLILAILDNQNLGKL ECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQDPQQQ+HQQHQQAMQGQMGLRP+GGANNGMHHPHH E TLGGA AGGP RSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180

Query: 181 ARGGGKQDSGDVGGA--DGQGSSAAGRGG--DGEETK 213
            RG GKQDS DVGGA  DGQGS+A GRGG  DGEE K
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 217

[Close]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy TrEMBL
Match: A0A6J1JX83 (GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 SV=1)

HSP 1 Score: 367 bits (941), Expect = 3.55e-127
Identity = 198/217 (91.24%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNIT+EQIQKYLDENKKLILAILDNQNLGKL ECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHPHHPEGTLGGAGAGGPARSSGQTD 180
           HQLQD QQQ+HQQHQQAMQGQMGLRP+GGANNGMHHPHH E TLGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEATLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSGDVGG--ADGQGSSAAGRGG--DGEETK 213
            RGGGKQDS DVGG  AD QG+SA GRGG  DGEE K
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Cp4.1LG08g00560.1 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-53
Identity = 143/231 (61.90%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NIT+EQIQKYLDENKKLI+AIL+NQNLGKL ECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQIHQQHQQAMQGQMGLRPMG-GANNGMHHP-HHPEGTL 180
           G+FPP+ PLQFG+PHQ  DPQQQ+   HQQAMQG MG+RPMG   NNG+ H  HH E  L
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GGAGAGGPARSSGQTDARGGGKQDSGDV--GGADGQGSSAAGRGGDGEETK 214
                   A ++G  DA GGGK D  ++   GADGQG SAA  GG   +T+
Sbjct: 181 A-------ANNAGPNDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTE 221

[Close]

BLAST of Cp4.1LG08g00560.1 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 127/209 (60.77%), Postives = 140/209 (66.99%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NIT+EQIQKYLDENKKLI+AI++NQNLGKL ECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQIHQQHQQAMQGQMGLRPMGGANNGMHHP-HHPEGTLGGAGAG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RPMG  NNGM H    PE  LGG    
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGG---- 183

Query: 182 GPARSSGQTDARGGGKQDSGDVGGADGQG 200
                        GGKQD     GADGQG
Sbjct: 184 --------NVGLRGGKQD-----GADGQG 190

[Close]

BLAST of Cp4.1LG08g00560.1 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-42
Identity = 127/243 (52.26%), Postives = 140/243 (57.61%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITSEQIQK---------------------------------- 61
           QQ PQM PM+PS PP  NIT+EQIQK                                  
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLD 63

Query: 62  YLDENKKLILAILDNQNLGKLNECAQYQAQLQKNLMYLAAIADAQPQAP--------AMP 121
           YLDENKKLI+AI++NQNLGKL ECAQYQA LQKNLMYLAAIADAQP  P        A+ 
Sbjct: 64  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123

Query: 122 PQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQIHQQHQQA 181
            QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q QDPQQQ  Q HQQA
Sbjct: 124 AQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQIHQQA 183

Query: 182 MQGQMGLRPMGGANNGMHHP-HHPEGTLGGAGAGGPARSSGQTDARGGGKQDSGDVGGAD 200
           MQG MG+RPMG  NNGM H    PE  LGG                 GGKQD     GAD
Sbjct: 184 MQGHMGIRPMGMTNNGMQHAMQQPETGLGG------------NVGLRGGKQD-----GAD 224

[Close]

BLAST of Cp4.1LG08g00560.1 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-22
Identity = 85/215 (39.53%), Postives = 114/215 (53.02%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITSEQIQKYLDENKKLILAILDNQNLGKLNECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+TS+ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQIHQQHQQAMQGQMGLRPM--GGANNGMHHPHHPEGTLGGAGAGGPARSSG 185
             Q Q P   +  QHQQ    Q+G+     GG ++G+H      G     G G P   SG
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG 186

Query: 186 QTDARGGGKQDSGDVGGADGQGSSAAGRGGDGEET 213
                          GG +G+G    G  GDG ET
Sbjct: 187 ---------------GGGEGRG----GSSGDGGET 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g00560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VH6	6.9e-52	61.90	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	1.9e-46	60.77	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]
Q6AVI1	1.3e-21	43.00	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
Q8L8A5	8.2e-21	39.53	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
A5HEH4	4.7e-16	39.91	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]

BLAST of Cp4.1LG08g00560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974833.1	1.81e-142	100.00	GRF1-interacting factor 3-like [Cucurbita maxima] >XP_022975274.1 GRF1-interacti...	[more]
XP_022928756.1	7.35e-142	99.53	GRF1-interacting factor 3-like [Cucurbita moschata]	[more]
KAG6597050.1	2.99e-141	99.53	GRF1-interacting factor 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028524.1	4.54e-139	98.15	GRF1-interacting factor 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023550144.1	4.43e-128	91.71	GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo] >XP_023550145.1 GRF1...	[more]

BLAST of Cp4.1LG08g00560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IK03	8.74e-143	100.00	GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474408 PE=3 ...	[more]
A0A6J1EL72	3.56e-142	99.53	GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111435274 PE=...	[more]
A0A6J1FN71	4.33e-128	91.71	GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=...	[more]
A0A0A0K7M8	4.33e-128	91.71	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 S...	[more]
A0A6J1JX83	3.55e-127	91.24	GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 ...	[more]

BLAST of Cp4.1LG08g00560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00850.1	4.9e-53	61.90	GRF1-interacting factor 3	[more]
AT1G01160.1	1.4e-47	60.77	GRF1-interacting factor 2	[more]
AT1G01160.2	2.3e-42	52.26	GRF1-interacting factor 2	[more]
AT5G28640.1	5.8e-22	39.53	SSXT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 18..73 e-value: 5.6E-22 score: 77.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..140
None	No IPR available	PANTHER	PTHR23107:SF26	BNAA09G51550D PROTEIN	coord: 1..188
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..188

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG08g00560	Cp4.1LG08g00560	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g00560.1:three_prime_utr:001	Cp4.1LG08g00560.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g00560.1:exon:005	Cp4.1LG08g00560.1:exon:005	exon
Cp4.1LG08g00560.1:exon:004	Cp4.1LG08g00560.1:exon:004	exon
Cp4.1LG08g00560.1:exon:003	Cp4.1LG08g00560.1:exon:003	exon
Cp4.1LG08g00560.1:exon:002	Cp4.1LG08g00560.1:exon:002	exon
Cp4.1LG08g00560.1:exon:001	Cp4.1LG08g00560.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g00560.1:cds:004	Cp4.1LG08g00560.1:cds:004	CDS
Cp4.1LG08g00560.1:cds:003	Cp4.1LG08g00560.1:cds:003	CDS
Cp4.1LG08g00560.1:cds:002	Cp4.1LG08g00560.1:cds:002	CDS
Cp4.1LG08g00560.1:cds:001	Cp4.1LG08g00560.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g00560.1:five_prime_utr:002	Cp4.1LG08g00560.1:five_prime_utr:002	five_prime_UTR
Cp4.1LG08g00560.1:five_prime_utr:001	Cp4.1LG08g00560.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g00560.1	Cp4.1LG08g00560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity