Cp4.1LG06g09210.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG06g09210.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionExostosin domain-containing protein
LocationCp4.1LG06: 6780204 .. 6786656 (+)
Sequence length1081
RNA-Seq ExpressionCp4.1LG06g09210.1
SyntenyCp4.1LG06g09210.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGAATGCATAGTACTTATTTATAAATGATTCATGCACGCTCGCATGAATCTATTAGGCGGATTACCGTTGGTACTGAATACTGGCTAGCACTCACTTATGCGGCTGAAAACTAACGGGAGGAGGAAAAAAAATGTCTATAGTACCTTGCTCTACGCATCCATACAGAATACGTACTAGAGAGCTGGTCATGAGCTAGGCCAAAACTGGTTGATAAGGAATCAACCCAAGGAAAATTTCTGATACTAAATGATAAGTAATCACTACAAGTGAAGTAAGATTTAGATTACCTTGTTAATCAAATATCTCAAGACAATAACACTTGTTTGAGATGCGAATCACTCCACAAGCAAGATCGAACATGTCTAGCTTGAATGATACTAAGCATGCAATCTAAATTAGATAGAATTGCAGAGGAAATGTAAAAACATTTAGCCCTAATGATAAAAAATCACTCGAACCAAAAGTAAAATTCAAATTACCTTGTTAATCAAATATCTCAGGGCAAGAACACTGGTTTGAGATTCAAATTACTTCATTGATTATATCAGGCTAGAATGATTCTACATGCAACAAAAATACTCGTTTTACAACATCTTTCAAGTCTCCTTACAAATACAACATACATGACTTTATATAACCAAAAAATGAGACTGTTGACCTTCCATGAGACATTTAAATTATCATTAATCATAAATTTGTAACATTTAAGAGAAGCCCCACTTGAATATCTTGGAGTCATAAATGAAACTTGATTCTTTTTAATGTCACTGGTTGTAGGTTGGGTCGGGTTCGGCTTGTGTACAAAAGCCGGAGCAGACCAAGGAGTTGTTGGGCTCGAGGTGTGTGTCTAGGCTTGTGGCCTAGGCTGTCCAAAGCTGGCAATTCAGGCTCGAGTATGCCGTTTGAGAAATCTATTTGTTGAGACTGAAGTTCAAACTCAAGTTCGGATTTCAAGCTTGATATCTTTATCTGAACCTAGTTTTTACCCGACTTTGCCCCTTTTCCTATGCGCTTTTCTTCTAGTTGTGTCAACTTTTGGCCACGTTTGATTGATTCTCAACCCCCTTTGACCACGAATTCGTGAAAAATTTCTGAAATTTTGATAATTGTAACGAAATCATAATAAATTAAGGTAAAAGGAGAAATTTGAAAATCGACTTACTGTAACGGTCTCTTCCACGACCCGAAAACCATGAGTTTTTTTACCGTTACAAAATATATATATATATATATATATATATAATACCTATGGATAAATTCTAAGATATTGAAATTTATGTGGGATTTTGTGTTTACAATATCGAGTAATATAATAAAGTCCACTCCCAGGGTCTCACTTCAACACAGATCCCTCTCTTTTCTTCGGCTCTTCGTGAATCTTAAGCTTCCCCTTTCGCCACCAACGGGAATTTCAGGTTATCTCTCAGATCTTACCTCCTTTTTACGTTTTGGGCCCTCTCAATTATTACCTCATTTCCCCTTTTTGTTCTTCTGATTTTGTTTTCTTTCCAAGTTTCTTCGTGGATTTGATGTTCTTTTGTTTCGATTCATCTGTTTCTGCTTGTTTCGTTTATGATTTGCTTTCTTTTTTCGAATCTAATTGTGTGATTGTCTTCTATTTGTCTCTTTTGGGTTTTGTTTACGGCGGGTTGTTGTTTGGAGTTTGATTCGTGTTCTTCTCTCGTTTCTTTATGAAGAATTTCTGTTCGATTCTGCGTTGATTTGAAATGTTGGAGCAACTCTGGTTTGGGAAATTTGTGGCAATTGTTTGATTTTGGAACCCTTGGTTTTATTGCTTAACAGATTAGTTTAATCCAACATCGGTTGGAGAGGAGAACGAAATATCTTTTATAAGGGTGTGGAAACCCCTCCCTAGCATACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGTAAGCCTAAAGAGGACAATATCTCCTAGCGGTAGGTTTGGGCCGTTACAGTTGGTATTAGAGCCAGACACCGGGCAATGTGCCAGTGAGGAGACTGAGCCTCGAAGGGGTTAGACACGAGGCGGTGTGCCAACAAGAACACTGGGCATCAAAGGGGGTGGATTTGGTGGGGGTCCCACATCGATTGGAGAAAGGAACGAGTGTCAGCGAGGATGCTAGGTCCCGAAGAGGGGTGGATTGTGATATCTCACATTGGTGTTGGTATTAGAGCTAGACACCGGGCGATGTGCCAGCGAGAAGGCTGAGCCCCGAATGGGGTAGACATGAAACAGTGTGCCAGCACGGACACTGGGCATCGAAGGAGGTGGATTTGGTGGGGGTCCCACATTGATTGGAGAAAGGAATGAGTGCCAGTAAGGACACTGGGTCCCGAAGAGGGATGGATTGTGATATCCCATATTAGTTGGGGAGGAGAACGAAACACCGTTTATAAGCATGTGGAAACCTCTCCCTATTAGACACGTTTAAAAACCTTGAGGGGAAGTTCAAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGAGCTTGAGCCGTTACATTACGGTAATCATAGTTAGAGGTTTTAGGGGAATGGGTTGAGTGGGAGATGGCCATTTTAGTTCTTACTGATCTCTGTATCTCTTTTCTTAAACATAAACTATTTGATCGCCAAATGTAGAACTGATACACACATCTGTTGTCAATTTACTTGGTCTGTGGACGTCTACTGTGGATAATGGGTTACTGTTTCACATGCATGCTCATATTTGCTTGGTCAGTTGGTGTCATGGGGTGAATTTTTATTAAATGATTAATGAAAAACGAAAGCCGAGATAGCTCAACTAACATAAGATATACACAACCAAATGGTTAGAGGTTCGAATTTCACGCCCAAGTTGTCGTATCTGAAGAATAAACTTTGAAAATGGTGGAGTTTTTTTGTTTTTGTTTGTTTTTTTAAGTTCCTATGCTACATCAAAGCATGTATCTAGTTTCCAAGCATGCCATGAACTCGAACAATGTATATTGATAGACATCAAGAAAACTCACCCGTCTAACGAGCGAACGTTGTAGAATTGAAGAGTAGACGATGACTCAATCGCATGAGTATGGATTAGTTGATGAACCACCATGTATAATGATTGGGTGCTCATTGGATGTTTTTGGTTAGTTTTGAGCTTAAAACACTACATCATTGCCCATAACATGTTAATTCAAGTAATGCCCTTGAACATAGCCTATTTTAAATCGATTTTCTTGGTTCATGTCGTATAGAAAAATTTGAAGTTGTAATCATGTTTTAATATATTTCATCATTTAACAATATAGTTGTGTTAAGAAATGAATTCACATCAGTTAAACAAAAATACTGGTTCAACTCCTTTTTGATTACTGTGGAGTTAAAAATCTAGTTAGCTGATCTCTAGCAATCATGAAATGTTCTTATTTTTTCCTCTAACGCTTGTTAATCTCTGTGTTTTAACATTTTGAGCTCTGTGATGTCAACCTATAAGTGTGAAGCTGTGATCTTCAGTGTGCAATACTGTGATATCCCAAATCGGTTGGGGAGGAGAACGAAACTCCTTTTATAAGGGTGTGGAAACCTCTTCTAGCAGACGCGTTTTAAAAATCTTGAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGAGCCGTTACAAATGGTATTAGAACCAGACACCGGACGATGTGCCAGCGAGGAGATTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAGCAAGGACTCTGGGTCCTGAAGAGAGGTAGATTTGGTGGGGGTGCCACATCGATTGGAGAAAGGAATGAGTGCCAGCGAGGACGCTAGGCCCTGAAGGGGGTGGATTGTGATATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATATGGGTGTGGGAACCTCTCCCTGGCAGACGTATTTTAAAAACCTTGAGGGTAAGCCCGAAAGAGAAAGCCCAAAGAAGATAATATCTGCTAGTGTGGGCTTGGGCTGTTACAAATATGGTTTTGTGTTCCCGGTTTTCTGCATAATATATGTTCTGTTTTGCCTACTAGTTACATTTTCTAATATTTTCCCTTTCATATATTGAGCTTCTAGGAATTTATGTGTATTGGCCACAAGTTGATTTCGTTTTCAGAAGAACTAACTATTAGAAACTTTGATATTTTACAGCTTATGGGTTTGATTCTTTGCTGTTAGTTGACCTACTTAGATATCTATATATATATAGCATGTCCTAATGCCATAGTTGTCCATGTCATCCAATGAGGTTTTCATAAGCTAGCTACTCAATTAGAGACATGAGTTGTAACGGCCCAAGTCCACTGCTAACAGATATTGTCCTCTTTGGTCTTTCCCTCAAGGTTTTTAAAACCCGTCTATTAGGGAGAGGTTTCCACACCCTTGTAAAAAATGGTTCGTTTCCCTCTCCAACTGATGTGAATCTCACACAAGTTTTCCCAAATTATCAAACAGTAAGTGTAATAATTTTCATAAGCTAACTATTCAAAAGACACGAGTTGTAACAGCCCAAGTCCACCGTTAGTAAATATCGTTCTCTTTGGATTTTTCCTTTCGGACTTCCCCTCAAGGTTTTTAAAACACGTCTGTTAGAGAGAGGTTTCCACACCCTTATAAACAATGGTTCGCTTCCCCCTCCAACCAACGTGGATCTCACATGAGTTTTCCCGAATTATTGAACAATAAGATGTATTAGTTTGCATAAGCTAGCTACTTAATTAGAGACACGAGTTGTAACAGCCCAAGTCCACCATTAGCAAATATTGTCCTCTTTTGGCTTTCCCTTTCAGGCTTCCCTCTCAAGGTTGTTAAAATGCGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGGTTTGTTTCCCTCTCCAACCGACGTGGATCTAACACAAGTTTCCCCGAATTATCGAATTGTAAGATGTAATAATTTTCATAAGCTAGCTATTCAATTAGAGACACGAGTTGTAACAGCCCAAGTCCACCATTAGCAAAATTGTTCTCTTTAGATTTTCTCTTTCGGCCTTCCCCTTAAGGTTTTTAAAATACGTCTGCTAGGGAGAGGTTTCCCTTATAAAGACTGGTTCGTTTCTCTCTCCAACCGATGTGGATCTCACACAAGTTTTCCCGAATTATCGAACAGTAAGTTGTAATAATTTTCATAAGCTAGCTACTCTATTAGTCTACTATTATCAGACGGTAGGATGTAATAATTTCCTCCATTAGAAACACTAATTGTTATGCATTTTTATATGGTTGCTTGTTGAAGTGAAAGTTGTCTGAGGGGGTTCCAAGTTCTGCTAATATATGACATTTGACATATATATCAACATACCTTGTTCCTTCTATCACACAATCTTCTTGCATATATAGAATAATAGTGAGTTTCGTTTACGGTATGCTTTTTTGGTCGGAATAAACTTGCAAGATCGATTCCAGTGTCTCCGCTGATGTACATTTCGAAGTTCTGACATTCTCTATTTTGTTCCTCTGACAAAGAATTGCAGCTAGGAACTCAAGTAGCAGATAGCTCGACGTTTATAAACATGAGTTTAGCATGTCTCGTCTGCAACAGTGTCGATAGCCCTTCACACTCCCTTAGGAGCTACTCGGTTTCGAGTTCAGACAACGAGGGAAGATGCTCTGCAATAGCCAACTGCCTAATATGGAGACCATCTTTTCCCCCAACACACCACCACCACCACCCATCATATGTAGCATCAGCCAAGGTAACTCCCCAACCAACCATTTCCAACAGCAACGTAATGGACGGTACACCCAGGTTGGTTCGAAGCCGAGCCGTAAGAAGGGACCTAGTACAAGACTGGAATTTCGACGAGGTGGTCGTAGTTCAGCATTAGCGCGTTTTACGTTCGAGTAGACGAGAGTAGAATTTTCAAATGGGCATGGCGATGATCTGAAACGATTGAGGTAGCGTCTCGCTTCCTATGCATTTTTGTTTTGTTTGTAAGCATGAGAAAATGGGACTTAGAACCTTGTTTATATATGTTAGCTACAGATTAGTGGTTCATAGGAGGCAGGCAGGGAAGAAGGGATGGGTTTAGGTAAGTTTTGTAAGGTTGGATGGGATTATGCTTTCAAAATCTTCCATGATATACACCAAGTTTATGTATGTATAAACAAATAAGCATTGTTAAAGAACTTTTTGTAGAAAAGTTCACATCTCAATCTTCCAAAACCTTGAAAACTCCTTTGAGTTTGGAGAAAACAAATAAGCTCTATGAATTGTCGTGCTTTTAGGTACTTTACTCGACTCTTTTTAAGTCTTTATTAGAAGGACCGAACCTTTGAAACTTTAGGTCTTTGTCAAGGATATTTAACCTTCTATTACGGTTTACCATATGTATCTGATCATATTTGATCCTTTATTATTGGCAAATATCTTGTATGATATTTAGC

mRNA sequence

GTTGAATGCATAGTTGGGTCGGGTTCGGCTTGTGTACAAAAGCCGGAGCAGACCAAGGAGTTGTTGGGCTCGAGGGTCTCACTTCAACACAGATCCCTCTCTTTTCTTCGGCTCTTCGTGAATCTTAAGCTTCCCCTTTCGCCACCAACGGGAATTTCAGAATTGCAGCTAGGAACTCAAGTAGCAGATAGCTCGACGTTTATAAACATGAGTTTAGCATGTCTCGTCTGCAACAGTGTCGATAGCCCTTCACACTCCCTTAGGAGCTACTCGGTTTCGAGTTCAGACAACGAGGGAAGATGCTCTGCAATAGCCAACTGCCTAATATGGAGACCATCTTTTCCCCCAACACACCACCACCACCACCCATCATATGTAGCATCAGCCAAGGTAACTCCCCAACCAACCATTTCCAACAGCAACGTAATGGACGGTACACCCAGGTTGGTTCGAAGCCGAGCCGTAAGAAGGGACCTAGTACAAGACTGGAATTTCGACGAGGTGGTCGTAGTTCAGCATTAGCGCGTTTTACGTTCGAGTAGACGAGAGTAGAATTTTCAAATGGGCATGGCGATGATCTGAAACGATTGAGGTAGCGTCTCGCTTCCTATGCATTTTTGTTTTGTTTGTAAGCATGAGAAAATGGGACTTAGAACCTTGTTTATATATGTTAGCTACAGATTAGTGGTTCATAGGAGGCAGGCAGGGAAGAAGGGATGGGTTTAGGTAAGTTTTGTAAGGTTGGATGGGATTATGCTTTCAAAATCTTCCATGATATACACCAAGTTTATGTATGTATAAACAAATAAGCATTGTTAAAGAACTTTTTGTAGAAAAGTTCACATCTCAATCTTCCAAAACCTTGAAAACTCCTTTGAGTTTGGAGAAAACAAATAAGCTCTATGAATTGTCGTGCTTTTAGGTACTTTACTCGACTCTTTTTAAGTCTTTATTAGAAGGACCGAACCTTTGAAACTTTAGGTCTTTGTCAAGGATATTTAACCTTCTATTACGGTTTACCATATGTATCTGATCATATTTGATCCTTTATTATTGGCAAATATCTTGTATGATATTTAGC

Coding sequence (CDS)

GTTGAATGCATAGTTGGGTCGGGTTCGGCTTGTGTACAAAAGCCGGAGCAGACCAAGGAGTTGTTGGGCTCGAGGGTCTCACTTCAACACAGATCCCTCTCTTTTCTTCGGCTCTTCGTGAATCTTAAGCTTCCCCTTTCGCCACCAACGGGAATTTCAGAATTGCAGCTAGGAACTCAAGTAGCAGATAGCTCGACGTTTATAAACATGAGTTTAGCATGTCTCGTCTGCAACAGTGTCGATAGCCCTTCACACTCCCTTAGGAGCTACTCGGTTTCGAGTTCAGACAACGAGGGAAGATGCTCTGCAATAGCCAACTGCCTAATATGGAGACCATCTTTTCCCCCAACACACCACCACCACCACCCATCATATGTAGCATCAGCCAAGGTAACTCCCCAACCAACCATTTCCAACAGCAACGTAATGGACGGTACACCCAGGTTGGTTCGAAGCCGAGCCGTAAGAAGGGACCTAGTACAAGACTGGAATTTCGACGAGGTGGTCGTAGTTCAGCATTAG

Protein sequence

VECIVGSGSACVQKPEQTKELLGSRVSLQHRSLSFLRLFVNLKLPLSPPTGISELQLGTQVADSSTFINMSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH
Homology
[Close]
BLAST of Cp4.1LG06g09210.1 vs. NCBI nr
Match: KAG6592240.1 (hypothetical protein SDJN03_14586, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218 bits (555), Expect = 6.10e-70
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 0 

Query: 63  DSSTFINMSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH 122
           DSST INMSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH
Sbjct: 25  DSSTCINMSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH 84

Query: 123 --PSYVASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
             PSYVASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH
Sbjct: 85  HHPSYVASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 137

[Close]
BLAST of Cp4.1LG06g09210.1 vs. NCBI nr
Match: XP_022976952.1 (uncharacterized protein LOC111477165 [Cucurbita maxima] >XP_022976953.1 uncharacterized protein LOC111477165 [Cucurbita maxima])

HSP 1 Score: 213 bits (541), Expect = 2.82e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA
Sbjct: 1   MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH
Sbjct: 61  KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 104

[Close]
BLAST of Cp4.1LG06g09210.1 vs. NCBI nr
Match: XP_022932557.1 (uncharacterized protein LOC111439046 [Cucurbita moschata])

HSP 1 Score: 207 bits (526), Expect = 6.18e-66
Identity = 104/108 (96.30%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH----PSY 129
           MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH    PSY
Sbjct: 1   MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHHHHHPSY 60

Query: 130 VASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           VASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH
Sbjct: 61  VASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 108

[Close]
BLAST of Cp4.1LG06g09210.1 vs. NCBI nr
Match: XP_016902709.1 (PREDICTED: uncharacterized protein LOC103500045 [Cucumis melo])

HSP 1 Score: 191 bits (484), Expect = 1.23e-59
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLACLVCNSV+SPSHS RSYSVSSSDNEGRCSA+ANCLIWRPSFPPTHH   PSY ASA
Sbjct: 1   MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCSAMANCLIWRPSFPPTHH---PSYAASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPTISNSNVMDGTPRLVRSRAV+RDLV+DWNFDEVVVVQH
Sbjct: 61  KVTPQPTISNSNVMDGTPRLVRSRAVKRDLVRDWNFDEVVVVQH 101

[Close]
BLAST of Cp4.1LG06g09210.1 vs. NCBI nr
Match: XP_038898475.1 (uncharacterized protein LOC120086102 [Benincasa hispida] >XP_038898476.1 uncharacterized protein LOC120086102 [Benincasa hispida])

HSP 1 Score: 189 bits (481), Expect = 3.52e-59
Identity = 95/104 (91.35%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLACLVCNSV+SPSHS RSYSVSSSDNEGRCSA+ANCLIWRPSFPP HH   PSY ASA
Sbjct: 1   MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCSAMANCLIWRPSFPPMHH---PSYAASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPTISNSNVMDGTPRLVRSRAVRRDLV+DWNFDEVVVVQH
Sbjct: 61  KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVRDWNFDEVVVVQH 101

[Close]
BLAST of Cp4.1LG06g09210.1 vs. ExPASy TrEMBL
Match: A0A6J1INM3 (uncharacterized protein LOC111477165 OS=Cucurbita maxima OX=3661 GN=LOC111477165 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 1.37e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA
Sbjct: 1   MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH
Sbjct: 61  KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 104

[Close]
BLAST of Cp4.1LG06g09210.1 vs. ExPASy TrEMBL
Match: A0A6J1EX41 (uncharacterized protein LOC111439046 OS=Cucurbita moschata OX=3662 GN=LOC111439046 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 2.99e-66
Identity = 104/108 (96.30%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH----PSY 129
           MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHH    PSY
Sbjct: 1   MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHHHHHPSY 60

Query: 130 VASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           VASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH
Sbjct: 61  VASAKVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 108

[Close]
BLAST of Cp4.1LG06g09210.1 vs. ExPASy TrEMBL
Match: A0A1S4E3A0 (uncharacterized protein LOC103500045 OS=Cucumis melo OX=3656 GN=LOC103500045 PE=4 SV=1)

HSP 1 Score: 191 bits (484), Expect = 5.96e-60
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLACLVCNSV+SPSHS RSYSVSSSDNEGRCSA+ANCLIWRPSFPPTHH   PSY ASA
Sbjct: 1   MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCSAMANCLIWRPSFPPTHH---PSYAASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPTISNSNVMDGTPRLVRSRAV+RDLV+DWNFDEVVVVQH
Sbjct: 61  KVTPQPTISNSNVMDGTPRLVRSRAVKRDLVRDWNFDEVVVVQH 101

[Close]
BLAST of Cp4.1LG06g09210.1 vs. ExPASy TrEMBL
Match: A0A0A0K7X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290600 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 1.98e-58
Identity = 93/104 (89.42%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLACLVCNSV+SPSHS RSYSVSSSDNEGRCSA+ANCLIWRPSFPPTHH   PSY ASA
Sbjct: 1   MSLACLVCNSVESPSHSFRSYSVSSSDNEGRCSAMANCLIWRPSFPPTHH---PSYAASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPT+S+S+VMDGTPRLVRSRAVRRDLV+DWNFDEVVVVQH
Sbjct: 61  KVTPQPTMSDSDVMDGTPRLVRSRAVRRDLVRDWNFDEVVVVQH 101

[Close]
BLAST of Cp4.1LG06g09210.1 vs. ExPASy TrEMBL
Match: A0A6J1C1C6 (uncharacterized protein LOC111007477 OS=Momordica charantia OX=3673 GN=LOC111007477 PE=4 SV=1)

HSP 1 Score: 186 bits (472), Expect = 4.12e-58
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MSLAC+VCNSV+SPSHS RSYSVSSSDNEGRCSA+ANCL+WRPSFPPTHHH  PSY ASA
Sbjct: 1   MSLACIVCNSVESPSHSFRSYSVSSSDNEGRCSAMANCLVWRPSFPPTHHH--PSYAASA 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQH 173
           KVTPQPTI+NSN +DGTPRLVRSRAVRRDLV+DWNFDEV VVQH
Sbjct: 61  KVTPQPTITNSNGLDGTPRLVRSRAVRRDLVRDWNFDEVGVVQH 102

[Close]
BLAST of Cp4.1LG06g09210.1 vs. TAIR 10
Match: AT1G71865.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0 

Query: 70  MSLACLVCNSVDSPSHSLRSYSVSSSDNEGRCSAIANCLIWRPSFPPTHHHHHPSYVASA 129
           MS ACLVC+SV+SPSHS RSYSVSSSDNEGRCS IA+CL  +        +  P+  +S+
Sbjct: 1   MSFACLVCHSVESPSHSFRSYSVSSSDNEGRCSVIASCLTRKSLIQAARSNPFPA--SSS 60

Query: 130 KVTPQPTISNSNVMDGTPRLVRSRAVRRDLVQDWNFDEV 169
           KVTPQP          +PRLVRSRAVRRD+V+DWNF+E+
Sbjct: 61  KVTPQPNFQAGE--GASPRLVRSRAVRRDIVRDWNFNEI 95

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g09210.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG06g09210.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592240.16.10e-7097.35hypothetical protein SDJN03_14586, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022976952.12.82e-68100.00uncharacterized protein LOC111477165 [Cucurbita maxima] >XP_022976953.1 uncharac... [more]
XP_022932557.16.18e-6696.30uncharacterized protein LOC111439046 [Cucurbita moschata][more]
XP_016902709.11.23e-5991.35PREDICTED: uncharacterized protein LOC103500045 [Cucumis melo][more]
XP_038898475.13.52e-5991.35uncharacterized protein LOC120086102 [Benincasa hispida] >XP_038898476.1 unchara... [more]
BLAST of Cp4.1LG06g09210.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1INM31.37e-68100.00uncharacterized protein LOC111477165 OS=Cucurbita maxima OX=3661 GN=LOC111477165... [more]
A0A6J1EX412.99e-6696.30uncharacterized protein LOC111439046 OS=Cucurbita moschata OX=3662 GN=LOC1114390... [more]
A0A1S4E3A05.96e-6091.35uncharacterized protein LOC103500045 OS=Cucumis melo OX=3656 GN=LOC103500045 PE=... [more]
A0A0A0K7X51.98e-5889.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290600 PE=4 SV=1[more]
A0A6J1C1C64.12e-5887.50uncharacterized protein LOC111007477 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
BLAST of Cp4.1LG06g09210.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71865.14.6e-2559.60unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36002PYRDcoord: 59..171
NoneNo IPR availablePANTHERPTHR36002:SF1PYRDcoord: 59..171

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG06g09210Cp4.1LG06g09210gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG06g09210.1:exon:001Cp4.1LG06g09210.1:exon:001exon
Cp4.1LG06g09210.1:exon:002Cp4.1LG06g09210.1:exon:002exon
Cp4.1LG06g09210.1:exon:003Cp4.1LG06g09210.1:exon:003exon
Cp4.1LG06g09210.1:exon:004Cp4.1LG06g09210.1:exon:004exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG06g09210.1:cds:004Cp4.1LG06g09210.1:cds:004CDS
Cp4.1LG06g09210.1:cds:003Cp4.1LG06g09210.1:cds:003CDS
Cp4.1LG06g09210.1:cds:002Cp4.1LG06g09210.1:cds:002CDS
Cp4.1LG06g09210.1:cds:001Cp4.1LG06g09210.1:cds:001CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG06g09210.1:three_prime_utr:001Cp4.1LG06g09210.1:three_prime_utr:001three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG06g09210.1Cp4.1LG06g09210.1-proteinpolypeptide