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Cp4.1LG04g03570.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACATTGACATAGAGATTCACACCGTGATAAGGTCGAGGCCAACCCGAGCCAACCACAAGAAAGGTAATCAATCATCTCTACAACCTCATGAAATCATCACATATAGAATACTATTGGTGGGGAGCCAAATCGAAAATGAAAAGCTAAAGCTTGAGAAGTTTAGGATAGACAAATGATNTCCAGCTGTTCTAAGATAAAAAAGAGATCTTTTTCAATAAATTTGAGAAGAGGGGGTTAGATTTGGATACCCATTAAAAGTCTGATTCTTTTCTTTGTTTGTATTAAGAGATTCGTTCCAATCACCAGTTTATTTATTCCGCTATTCACTCTCAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATCGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCTCTTCTCAGCCCGTCATCTCAATTCCCGAAGGTAACTTCAAAATTTCTTCGTTCTAATTCTCAGATCCGATTAGATCTCATCTGGGTTTCATCTAATTTCGACGGAGATTCGTTAGTTTTGTAATTCGCTTGCTTAGATCTCGTGTTTTGGGGGTTTTCTTGTGGTTCCCTGTTCTTTGATTCTGATTATAATGTCGGTTTTATGTGATTCTAGGGTTTATGAATTTTGAAATGGTTTCTGTTTATGGATTGTAGTCTAATTGTTTATCTGATTATGTTTATCTGCAGAATTGAGGAACTCTACCTTTGCAGGTTAGTTTTACTTGAGAAATTTACTTTCTTTCTCAAGTGATTATAATGATTCTGCTTCCTCATGACTATTGAAACAATGTAAAAGATCTCAATATATGAACTCTTCTACTGATCATGAACTAGATTGCATTGTTCTAAGAGAGCCATTGGATGATGTTTCCTCCATTTATAGGTTCTTCAATATTTTCAGTAAAAATGCCTTTCGAGGTAGGCTCGCCTTGAGTTTTTCTTAGGTTGTAACCGTGAGATCCCATATCGGTTGGAGGATGCTGGGTCCTGAAGAGAGTGGATTGTGAGAGCCCACATTGGTTGGAGAGGGAAACGAAACATTCTTTCTAAGGGTGTAGAAACCTCTCACTAGCATACGCGTTTTAAATGCTTGAGAGGAAACTCGGAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACGGTAACTCTTGAGTAGAAGGGTGAGGCTGAGTGCATGAAATGAAGTAGCAACATGAATGGATAAAGGAGCATGAATGATCTATCAATTTCTTTCTTAATACGTTTTAAAGTCAAGATTCATAAGTGCCTCTAGAAATAGTGTGCTATGGTAAATGTGAGGCCATAATCATGATGAACTTGAGTAGCTCGTAAGAAGCACGGACACTTTAATTTGGTTAATAATCACGATGAACTTGAGTAGCTCGAAAGAAGCACGGACACTTAAGTTTGGTTAATAACCATGATGAACTTGAGTAGCTTGTAAGAAGCACAGACACTTCAGTTTGGTTAATAATCATGATGAACACGAGTAACGATCCAATATTTAGGTGTGTGGTTTAGATTTTTCTTCTTTCAATTTCCATACTTCTTCCAACAAACTGTAAATACTCGTACATTTTGCAGATTGTGTTAAGCACGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGTTGAAGTTAAAGGAAGCCGAAGCCTCAGAAAGTCATCGTCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAAGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAAAACAGCATCCAAGCAGAGTAACACTTCCTCCCGTCCTCGCCTTTCGTTTTTGTTTCATATATATATATAATTTTTTGGTAGCAACTTAAATTTCACTCGACGCCCTCGAATAGATCGGAATGAACTATTTCAGGTATCTTTAGAGAATCGAAATGTCAATTACCATTGTTTAGTTAAGTCTATGAAAATGTGCATTAGTTGAAAGCAACTAATGTATTGATAAAGTTATGTTACTCTCATTTGTTATCTTCTTTGTGGCCTAATGGCCTCGTTCGAAACAAAATCGAAAGTTCAAGAACATATGATACGTTGTTGCACCTTTTCATAGGCAATCCATAATTCTCAACTACATGAATTTACATATATGTTTGTCCAGAAAGAGATCAAATAAGAAAGTTATAAGGTTACACAGGCTTCCATGAGACGTGGGAATCGAGCGAAGATTATGGTGCTCGAGTCTACCTTCCCGACATTAAGTTGACGAGGGCTTGGTTTTCGTAGAACGAGCCAACATCCCAATCTTCTGTTGCGGAAGAAAGTGTCATGAGAGCAACCACAATGGATCTCATGCTTGGGCGTAGCTGTGGATTCTCATGTGTACATGCTCTGGCAAGTTGAGCCATCTGCAACCAAAACAAATCCATATTCTCACAATCACACATCAAGCATCAGTTTACGAGAAGCAATGGCAGAAAGGCGTGTTACATTTACCTTGAAAACCGAATCGAGCGGGTAGTTCTCTTTGAGTCTTGGGTCGACTAGTTTGTGTAGGTTCTCCTTTGCATCGGGTTGATTCAGTACATCTTCAAACTGCAAAATGCAGGATCATCATAAGTAATGCTATAAGGGATTTTGAGAGTGAGAACGAAAAATTGGTTAGAGTATCCACCAAAGCGACAAGGCCTTTTGACTCGTTAATCGCGCTGGCTCTGTTCGTCTTAACCACAGCTTCCTTGGCTGAAATAAGCTCGTAAAGAACGACACCAAAAGCATATACGTCGATCTTTGGAGAAACATCACCATATTGTGCATATCTGGAGGTGCAGTAGATATCAATCAAAGCGTTATAAGACACAAAACTAGCCAGAATCTATAAGTAGGAGCTGATTGAACCAGCTGAAAATAACTACCGAGTGATGAACACCTAGAAACTCGATTCTA GACATTGACATAGAGATTCACACCGTGATAAGGTCGAGGCCAACCCGAGCCAACCACAAGAAAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATCGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCTCTTCTCAGCCCGTCATCTCAATTCCCGAAGAATTGAGGAACTCTACCTTTGCAGATTGTGTTAAGCACGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGTTGAAGTTAAAGGAAGCCGAAGCCTCAGAAAGTCATCGTCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAAGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAAAACAGCATCCAAGCAGAGTAACACTTCCTCCCGTCCTCGCCTTTCGTTTTTGTTTCATATATATATATAATTTTTTGGTAGCAACTTAAATTTCACTCGACGCCCTCGAATAGATCGGAATGAACTATTTCAGGTATCTTTAGAGAATCGAAATGTCAATTACCATTGTTTAGTTAAGTCTATGAAAATGTGCATTAGTTGAAAGCAACTAATGTATTGATAAAGTTATGTTACTCTCATTTGTTATCTTCTTTGTGGCCTAATGGCCTCGTTCGAAACAAAATCGAAAGTTCAAGAACATATGATACGTTGTTGCACCTTTTCATAGGCAATCCATAATTCTCAACTACATGAATTTACATATATGTTTGTCCAGAAAGAGATCAAATAAGAAAGTTATAAGGTTACACAGGCTTCCATGAGACGTGGGAATCGAGCGAAGATTATGGTGCTCGAGTCTACCTTCCCGACATTAAGTTGACGAGGGCTTGGTTTTCGTAGAACGAGCCAACATCCCAATCTTCTGTTGCGGAAGAAAGTGTCATGAGAGCAACCACAATGGATCTCATGCTTGGGCGTAGCTGTGGATTCTCATGTGTACATGCTCTGGCAAGTTGAGCCATCTGCAACCAAAACAAATCCATATTCTCACAATCACACATCAAGCATCAGTTTACGAGAAGCAATGGCAGAAAGGCGTGTTACATTTACCTTGAAAACCGAATCGAGCGGGTAGTTCTCTTTGAGTCTTGGGTCGACTAGTTTGTGTAGGTTCTCCTTTGCATCGGGTTGATTCAGTACATCTTCAAACTGCAAAATGCAGGATCATCATAAGTAATGCTATAAGGGATTTTGAGAGTGAGAACGAAAAATTGGTTAGAGTATCCACCAAAGCGACAAGGCCTTTTGACTCGTTAATCGCGCTGGCTCTGTTCGTCTTAACCACAGCTTCCTTGGCTGAAATAAGCTCGTAAAGAACGACACCAAAAGCATATACGTCGATCTTTGGAGAAACATCACCATATTGTGCATATCTGGAGGTGCAGTAGATATCAATCAAAGCGTTATAAGACACAAAACTAGCCAGAATCTATAAGTAGGAGCTGATTGAACCAGCTGAAAATAACTACCGAGTGATGAACACCTAGAAACTCGATTCTA ATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATCGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCTCTTCTCAGCCCGTCATCTCAATTCCCGAAGAATTGAGGAACTCTACCTTTGCAGATTGTGTTAAGCACGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGTTGAAGTTAAAGGAAGCCGAAGCCTCAGAAAGTCATCGTCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAAGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAA MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCSSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQGNIQTA Homology
BLAST of Cp4.1LG04g03570.1 vs. NCBI nr
Match: XP_023529511.1 (uncharacterized protein LOC111792346 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529512.1 uncharacterized protein LOC111792346 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529513.1 uncharacterized protein LOC111792346 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370 bits (951), Expect = 4.17e-129 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. NCBI nr
Match: XP_022930736.1 (uncharacterized protein LOC111437126 isoform X1 [Cucurbita moschata] >XP_022930737.1 uncharacterized protein LOC111437126 isoform X1 [Cucurbita moschata] >KAG7022852.1 hypothetical protein SDJN02_16588 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 369 bits (946), Expect = 2.41e-128 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. NCBI nr
Match: KAG6589153.1 (hypothetical protein SDJN03_17718, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 367 bits (942), Expect = 9.83e-128 Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. NCBI nr
Match: XP_022988959.1 (uncharacterized protein LOC111486163 isoform X1 [Cucurbita maxima] >XP_022988960.1 uncharacterized protein LOC111486163 isoform X1 [Cucurbita maxima]) HSP 1 Score: 361 bits (926), Expect = 2.70e-125 Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. NCBI nr
Match: XP_023529514.1 (uncharacterized protein LOC111792346 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 348 bits (892), Expect = 3.11e-120 Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. ExPASy TrEMBL
Match: A0A6J1ERF9 (uncharacterized protein LOC111437126 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437126 PE=4 SV=1) HSP 1 Score: 369 bits (946), Expect = 1.17e-128 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. ExPASy TrEMBL
Match: A0A6J1JN14 (uncharacterized protein LOC111486163 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486163 PE=4 SV=1) HSP 1 Score: 361 bits (926), Expect = 1.31e-125 Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. ExPASy TrEMBL
Match: A0A6J1ESC6 (uncharacterized protein LOC111437126 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437126 PE=4 SV=1) HSP 1 Score: 346 bits (887), Expect = 8.71e-120 Identity = 184/193 (95.34%), Postives = 184/193 (95.34%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. ExPASy TrEMBL
Match: A0A6J1JIP1 (uncharacterized protein LOC111486163 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486163 PE=4 SV=1) HSP 1 Score: 338 bits (867), Expect = 9.75e-117 Identity = 181/193 (93.78%), Postives = 181/193 (93.78%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. ExPASy TrEMBL
Match: A0A1S3C135 (uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495614 PE=4 SV=1) HSP 1 Score: 337 bits (864), Expect = 3.70e-116 Identity = 174/193 (90.16%), Postives = 181/193 (93.78%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. TAIR 10
Match: AT1G05070.1 (Protein of unknown function (DUF1068) ) HSP 1 Score: 245.7 bits (626), Expect = 3.0e-65 Identity = 119/181 (65.75%), Postives = 150/181 (82.87%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. TAIR 10
Match: AT2G32580.1 (Protein of unknown function (DUF1068) ) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58 Identity = 112/181 (61.88%), Postives = 140/181 (77.35%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. TAIR 10
Match: AT4G04360.1 (Protein of unknown function (DUF1068) ) HSP 1 Score: 181.8 bits (460), Expect = 5.2e-46 Identity = 96/171 (56.14%), Postives = 121/171 (70.76%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. TAIR 10
Match: AT2G32580.2 (Protein of unknown function (DUF1068) ) HSP 1 Score: 148.3 bits (373), Expect = 6.4e-36 Identity = 74/118 (62.71%), Postives = 93/118 (78.81%), Query Frame = 0
BLAST of Cp4.1LG04g03570.1 vs. TAIR 10
Match: AT4G30996.1 (Protein of unknown function (DUF1068) ) HSP 1 Score: 145.6 bits (366), Expect = 4.2e-35 Identity = 77/161 (47.83%), Postives = 105/161 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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