Cp4.1LG02g16830.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCGATCTTTTCAGTTAAATTATTTTTTTAGTGTTAATACAAATTAATATGAAGTTTTCACGGACCTGTGAATTATAAATTTTAATGTTATAAAATTAATGAACTAAGCTCGATCGATTTTCATGAACCTTACGGATAACAATTGCTATAGATATATAATCGGGTCGGCAGATATAATCATCATAAACAAGTTGATTATTCTCTCGTTGTTTGTAATTATTATAATTGTATTGTAATAATCTGTTTATTATCGCTCATGTAAGTCAAAAGTCGAGCTCTATTATATAAGAGTCTGTGATACGATTATTTTTTGAAATATTAATCTCGTTAATTAAGGAATTTATAAAGATTAATGTATTTATGCAATAACGGTTTTATTTTTTATTTTTTTTATTAAGTAAATTCGTATAATATAATATATTATAAATTATATAAATAGAGTAAAATAAGTCGCAAGGAATTGTGAGAAAGCTCGTAGTTTTGTCTAGTGAAACCATAACAAACGAGGCCTTCCTGAAAAGAAGGAAGAACAGAAAGGGAAACTGATCGGAGAGCTCATAGTGAAAATTCGTGATATCGTTCCGATCGAAAGCGTTGTTTCTTCTATCGGCATCTGAGAATCAATGGCGACGAAGACCGACGGAATCCAAGAGGAAGAAATTTCAAAGCTCGAGGAAGGCACTCTCGGAACCTGCGTCGCGCGTCTCCGTCCATCGTCTTGGGTTGCTATCATCCAAAAGGTACCGCTTCAACTGCCTCTGTTATTTCTCTCTTCTGCGCGCCAATCAATTGATTGTTTGATACAACGTGTTTGTTTATCTGGAAAGTGCTGCACGTTATCTCTCGTGTGTGATAACTTGTTTTATTCTCCGGAAAATCTGGCATATGGATGAATCGACTACGATAACTGTGTTGGTTCCTATCGAAATGCAGATATTAGGTTATCGAGAGTATGAAGCTTGTTTGATTCTTTGGAAAATCTGGTACATGCATCAATCGACTGTATAAAATGTGTTAGTTTCTCTGCAAAATCTGGCACTTGAATCAATCAAGTTTTAAGTTTATTGTTAGTTTCTCCGCGAAATCTGGCACTTGAATCAATCAACTTTTAAGTTTATTGTTTGGTTCTCTGCAAATTCTGCCAAATGAACTAATCGACTGTTAGGAACTTGTTTATTTCTCTGAAAAATCTGGCTCGCAAATCAATCGACTGTATAAAACTCGTTAGTTTCTCCCCAAATGCGGCACATGAATCAATAAATTGTATAAAAATTGTTTGTTTTGCAGTAAAACCTGTTTGTTTTTCCGGAAAATGCGGTACATGGATCTGATCAATCAAGTGTATGAAATGTGTTTGTTTCTCGGAAAAATTTGTGGCAGGTTATTGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGTGGTGAACAAAATTTACGGATCAGTGACGTTCCCGGGAATCTGCGTGGTTTGGGGATTGATTGTGATGGTTATGGTGTATTCGTTGGGACACATCTCTGGAGCGCACTTCAACCCTTCTGTTACCATCACATTCGCCATTTTTCGTCGCTTCCCCTTTTGTCAGGTCTCTCTCTTCTGTTACCATCATCTCATGATAAACTTAAAGAAATTTCAACTCCAAATAGACAATTTATTTTTGGNCAAATGAACTAATCGACTGTTAGGAACTTGTTTATTTCTCTGAAAAATCTGGCTCGCAAATCAATCGACTGTATAAAACTCGTTAGTTTCTCCCCAAATGCGGCACATGAATCAATAAATTGTATAAAAATTGTTTGTTTTGCAGTAAAACCTGTTTGTTTTTCCGGAAAATGCGGTACATGGATCTGATCAATCAAGTGTATGAAATGTGTTTGTTTCTCGGAAAAATTTGTGGCAGGTTATTGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGTGGTGAACAAAATTTACGGATCAGTGACGTTCCCGGGAATCTGCGTGGTTTGGGGATTGATTGTGATGGTTATGGTGTATTCGTTGGGACACATCTCTGGAGCGCACTTCAACCCTTCTGTTACCATCACATTCGCCATTTTTCGTCGCTTCCCCTTTTGTCAGGTCTCTCTCTTCTGTTACCATCATCTCATGATAAACTTAAAGAAATTTCAACTCCAAATAGACAATTTATTTTTGGCACGAAACGCAATTATGAATATTATAGCCGAATTATATTTTCTTTGATTACATATTTCAGGTTCCGATATACATAGGAGCTCAAGTAGCAGGGTCCCTTCTTGCAAGCACCACACTGGACCTATTGTTTGAAGTGACCCCGGAAGCCTTCTTTGGGACAGTGCCGGCAGGATCCGATGTCCAATCTTTCGTCCTTGAAATCATCATCACCTTCCTCTTGCTGTTAGTCGTCTCTGGTGTCTCCACTGATCACAGAGCTGTAAGTCATCCAAAAGCTTAATAGAACAAATTAAGATTTGTAGCTTAATAGAACAAATTAAGATTTGTAGCTTAATAGAACAAATTAAGATTTGTAGCTTAATAGAACAAATTAAGATCTGTAGTTATAACTTTTTAAATACTTTTTTCTTTTTGAAATTTTGGCTGGGATTTTGGAAACCCATTGAAAAAAGGAAAAATAGAGTGTGGATCCAAGGTTCCTTCNGTTTCATTTTCTTCTTCTTCAATCTTCTCTTTTCCCTCATTATGTAATGGCCATAAATACCTTTTTTGGGGGTTTTAAATACTTCTTTTGTTTCAAAATTGTTCATTATGGATTTGATTGATTATTAATTATTTTGTTTGTAAAAAAAAAACTTTATTAAAAAAATGTTTTTATGGGCAGGATACATTTTAAAATATCCTTAATTTTACATTTTAAACTTTTTTTTTTTTAAGTAGTTTGAGAACTTTTGTTCAACAGAATTTTTTTTAAAAAAATTCGAATTTATTCTAGATTATTGAGGTTGATGGGTTGATAATATTGTAAAAATAAGCACTGTATTCATCTATATTTTCTTTAACAGGTTGGAGAATTGGCGGGAATTGTTGTTGGAATGACTGTTCTGTTGAATGTCTTCGTGGCTGGGTAACTCTAAACTTCATTTTACTGTTGATATAATTCCAACACTAAAAATTTTAAAAATTTGAAAAGTACTAAATATCAAGAATATCCATTTTTTACTCTAAACGATGGTGTTCCATGAACACTAAATATCGAGAATATCCATTTGTTTTTTTTTCTCCTATTTTAGTTATATATATATATAGACACACATAATTGTTCATGATTTAGAGAATTTGGTATGATATATTATTTTATTTCTATTAAGATGTTTAAAGGAAATGAATTTAAATGGGAAATGCTTCTCCAAGAGATTGAATTCCCACGAATTCATTGCAGGGATTANTTTTTTTTTCTTTTTTTTTTTTTTTTTTTGGTGATTATTTCTGAAAACAAAACATAGGCCGATTTCAGGAGCTTCCATGAATCCAGCTAGGACCATTGGACCTGCGATAGTGAAGGGACAGTTCAAAGGATTATGGGTTTACATGGTTGGGCCGTTGATCGGAGCTATTGCCGGAGCATTTACTTACAACCTGATGAGATTCACAGACAAGCCGTTGTCGGAGATCACCAAAAACAGCTCATTCCTCAATCGCTGCCAAAAATCATAATGCCGCCTCTTCATCATCATCATCTTATCTTTTAACTACAGAAGCCACCAAGCTCGGGAGTCTCGAGCACAGCTTCGCATTTTTTCTCTCGGTAAAGCAACTTCACTCTTGCACAATGGTCATTCATTTGTGTATTTAGTGTGTCAACCGATCAATTCATCATTCATTCATTTAGAAAATTCGTTTTAGCAAAAGCATTATTTATTTGATCAAATAGTGCTTTGTTTTTTCCTTTTTCCTTTAGTTGTTGAAATGGATTCATTGCGAGTAGGGTGATATAGAGGTTTTGTTTGGAAATTGAATCTCGAACCAGTTGGATTTTTGTTGTTTTCATGCACGTGGGGCTAAAAATTATTCAACTTTGCTCGTGATTTAGCTAGTTTGTTCTTTACGTGCATACATCTTGTATATATAACAATATACGTGGATCATGAATATTGTAAAATTGTCGATATTTGGATATCATGAAACAAAATATTCATAAGCAA ATTCGATCTTTTCAGTTAAATTATTTTTTTAGTGTTAATACAAATTAATATGAAGTTTTCACGGACCTGTGAATTATAAATTTTAATGTTATAAAATTAATGAACTAAGCTCGATCGATTTTCATGAACCTTACGGATAACAATTGCTATAGATATATAATCGGGTCGGCAGATATAATCATCATAAACAAGTTGATTATTCTCTCGTTGTTTGTAATTATTATAATTGTATTGTAATAATCTGTTTATTATCGCTCATGTAAGTCAAAAGTCGAGCTCTATTATATAAGAGTCTGTGATACGATTATTTTTTGAAATATTAATCTCGTTAATTAAGGAATTTATAAAGATTAATGTATTTATGCAATAACGGTTTTATTTTTTATTTTTTTTATTAAGTAAATTCGTATAATATAATATATTATAAATTATATAAATAGAGTAAAATAAGTCGCAAGGAATTGTGAGAAAGCTCGTAGTTTTGTCTAGTGAAACCATAACAAACGAGGCCTTCCTGAAAAGAAGGAAGAACAGAAAGGGAAACTGATCGGAGAGCTCATAGTGAAAATTCGTGATATCGTTCCGATCGAAAGCGTTGTTTCTTCTATCGGCATCTGAGAATCAATGGCGACGAAGACCGACGGAATCCAAGAGGAAGAAATTTCAAAGCTCGAGGAAGGCACTCTCGGAACCTGCGTCGCGCGTCTCCGTCCATCGTCTTGGGTTGCTATCATCCAAAAGGTTATTGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGTGGTGAACAAAATTTACGGATCAGTGACGTTCCCGGGAATCTGCGTGGTTTGGGGATTGATTGTGATGGTTATGGTGTATTCGTTGGGACACATCTCTGGAGCGCACTTCAACCCTTCTGTTACCATCACATTCGCCATTTTTCGTCGCTTCCCCTTTTGTCAGGTTATTGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGTGGTGAACAAAATTTACGGATCAGTGACGTTCCCGGGAATCTGCGTGGTTTGGGGATTGATTGTGATGGTTATGGTGTATTCGTTGGGACACATCTCTGGAGCGCACTTCAACCCTTCTGTTACCATCACATTCGCCATTTTTCGTCGCTTCCCCTTTTGTCAGGTTCCGATATACATAGGAGCTCAAGTAGCAGGGTCCCTTCTTGCAAGCACCACACTGGACCTATTGTTTGAAGTGACCCCGGAAGCCTTCTTTGGGACAGTGCCGGCAGGATCCGATGTCCAATCTTTCGTCCTTGAAATCATCATCACCTTCCTCTTGCTGTTAGTCGTCTCTGGTGTCTCCACTGATCACAGAGCTGTTGGAGAATTGGCGGGAATTGTTGTTGGAATGACTGTTCTGTTGAATGTCTTCGTGGCTGGGCCGATTTCAGGAGCTTCCATGAATCCAGCTAGGACCATTGGACCTGCGATAGTGAAGGGACAGTTCAAAGGATTATGGGTTTACATGGTTGGGCCGTTGATCGGAGCTATTGCCGGAGCATTTACTTACAACCTGATGAGATTCACAGACAAGCCGTTGTCGGAGATCACCAAAAACAGCTCATTCCTCAATCGCTGCCAAAAATCATAATGCCGCCTCTTCATCATCATCATCTTATCTTTTAACTACAGAAGCCACCAAGCTCGGGAGTCTCGAGCACAGCTTCGCATTTTTTCTCTCGGTAAAGCAACTTCACTCTTGCACAATGGTCATTCATTTGTGTATTTAGTGTGTCAACCGATCAATTCATCATTCATTCATTTAGAAAATTCGTTTTAGCAAAAGCATTATTTATTTGATCAAATAGTGCTTTGTTTTTTCCTTTTTCCTTTAGTTGTTGAAATGGATTCATTGCGAGTAGGGTGATATAGAGGTTTTGTTTGGAAATTGAATCTCGAACCAGTTGGATTTTTGTTGTTTTCATGCACGTGGGGCTAAAAATTATTCAACTTTGCTCGTGATTTAGCTAGTTTGTTCTTTACGTGCATACATCTTGTATATATAACAATATACGTGGATCATGAATATTGTAAAATTGTCGATATTTGGATATCATGAAACAAAATATTCATAAGCAA ATGGCGACGAAGACCGACGGAATCCAAGAGGAAGAAATTTCAAAGCTCGAGGAAGGCACTCTCGGAACCTGCGTCGCGCGTCTCCGTCCATCGTCTTGGGTTGCTATCATCCAAAAGGTTATTGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGTGGTGAACAAAATTTACGGATCAGTGACGTTCCCGGGAATCTGCGTGGTTTGGGGATTGATTGTGATGGTTATGGTGTATTCGTTGGGACACATCTCTGGAGCGCACTTCAACCCTTCTGTTACCATCACATTCGCCATTTTTCGTCGCTTCCCCTTTTGTCAGGTTATTGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGTGGTGAACAAAATTTACGGATCAGTGACGTTCCCGGGAATCTGCGTGGTTTGGGGATTGATTGTGATGGTTATGGTGTATTCGTTGGGACACATCTCTGGAGCGCACTTCAACCCTTCTGTTACCATCACATTCGCCATTTTTCGTCGCTTCCCCTTTTGTCAGGTTCCGATATACATAGGAGCTCAAGTAGCAGGGTCCCTTCTTGCAAGCACCACACTGGACCTATTGTTTGAAGTGACCCCGGAAGCCTTCTTTGGGACAGTGCCGGCAGGATCCGATGTCCAATCTTTCGTCCTTGAAATCATCATCACCTTCCTCTTGCTGTTAGTCGTCTCTGGTGTCTCCACTGATCACAGAGCTGTTGGAGAATTGGCGGGAATTGTTGTTGGAATGACTGTTCTGTTGAATGTCTTCGTGGCTGGGCCGATTTCAGGAGCTTCCATGAATCCAGCTAGGACCATTGGACCTGCGATAGTGAAGGGACAGTTCAAAGGATTATGGGTTTACATGGTTGGGCCGTTGATCGGAGCTATTGCCGGAGCATTTACTTACAACCTGATGAGATTCACAGACAAGCCGTTGTCGGAGATCACCAAAAACAGCTCATTCCTCAATCGCTGCCAAAAATCATAA MATKTDGIQEEEISKLEEGTLGTCVARLRPSSWVAIIQKVIAEVIGTYFVIFTGCGAVVVNKIYGSVTFPGICVVWGLIVMVMVYSLGHISGAHFNPSVTITFAIFRRFPFCQVIAEVIGTYFVIFTGCGAVVVNKIYGSVTFPGICVVWGLIVMVMVYSLGHISGAHFNPSVTITFAIFRRFPFCQVPIYIGAQVAGSLLASTTLDLLFEVTPEAFFGTVPAGSDVQSFVLEIIITFLLLLVVSGVSTDHRAVGELAGIVVGMTVLLNVFVAGPISGASMNPARTIGPAIVKGQFKGLWVYMVGPLIGAIAGAFTYNLMRFTDKPLSEITKNSSFLNRCQKS Homology
BLAST of Cp4.1LG02g16830.1 vs. ExPASy Swiss-Prot
Match: Q8W036 (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana OX=3702 GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 337.4 bits (864), Expect = 1.9e-91 Identity = 163/226 (72.12%), Postives = 197/226 (87.17%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy Swiss-Prot
Match: Q9FIZ9 (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana OX=3702 GN=NIP4-1 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 2.4e-91 Identity = 164/232 (70.69%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy Swiss-Prot
Match: P49173 (Probable aquaporin NIP-type OS=Nicotiana alata OX=4087 PE=2 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.3e-89 Identity = 164/225 (72.89%), Postives = 198/225 (88.00%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy Swiss-Prot
Match: Q0DK16 (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 302.8 bits (774), Expect = 5.1e-81 Identity = 156/257 (60.70%), Postives = 194/257 (75.49%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy Swiss-Prot
Match: Q40746 (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 9.6e-80 Identity = 147/230 (63.91%), Postives = 189/230 (82.17%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. NCBI nr
Match: XP_023523665.1 (probable aquaporin NIP-type [Cucurbita pepo subsp. pepo]) HSP 1 Score: 486 bits (1252), Expect = 3.40e-171 Identity = 269/343 (78.43%), Postives = 269/343 (78.43%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. NCBI nr
Match: XP_022948505.1 (putative aquaporin NIP4-1 [Cucurbita moschata] >KAG6607007.1 putative aquaporin NIP4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036706.1 putative aquaporin NIP4-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 480 bits (1236), Expect = 9.29e-169 Identity = 266/343 (77.55%), Postives = 268/343 (78.13%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. NCBI nr
Match: XP_022998713.1 (probable aquaporin NIP-type [Cucurbita maxima]) HSP 1 Score: 463 bits (1191), Expect = 6.58e-162 Identity = 262/343 (76.38%), Postives = 263/343 (76.68%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. NCBI nr
Match: CAA3015332.1 (Probable aquaporin NIP-type [Olea europaea subsp. europaea]) HSP 1 Score: 430 bits (1106), Expect = 9.37e-148 Identity = 230/352 (65.34%), Postives = 276/352 (78.41%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. NCBI nr
Match: XP_038882565.1 (probable aquaporin NIP-type [Benincasa hispida]) HSP 1 Score: 398 bits (1023), Expect = 2.38e-136 Identity = 222/343 (64.72%), Postives = 244/343 (71.14%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy TrEMBL
Match: A0A6J1GA14 (putative aquaporin NIP4-1 OS=Cucurbita moschata OX=3662 GN=LOC111452164 PE=3 SV=1) HSP 1 Score: 480 bits (1236), Expect = 4.50e-169 Identity = 266/343 (77.55%), Postives = 268/343 (78.13%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy TrEMBL
Match: A0A6J1KHI9 (probable aquaporin NIP-type OS=Cucurbita maxima OX=3661 GN=LOC111493295 PE=3 SV=1) HSP 1 Score: 463 bits (1191), Expect = 3.19e-162 Identity = 262/343 (76.38%), Postives = 263/343 (76.68%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy TrEMBL
Match: A0A5A7V2N2 (Putative aquaporin NIP-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00660 PE=3 SV=1) HSP 1 Score: 395 bits (1016), Expect = 1.33e-135 Identity = 219/343 (63.85%), Postives = 244/343 (71.14%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy TrEMBL
Match: A0A1S3C5C4 (probable aquaporin NIP-type OS=Cucumis melo OX=3656 GN=LOC103496839 PE=3 SV=1) HSP 1 Score: 395 bits (1016), Expect = 1.33e-135 Identity = 219/343 (63.85%), Postives = 244/343 (71.14%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. ExPASy TrEMBL
Match: A0A0A0LA39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G345890 PE=3 SV=1) HSP 1 Score: 391 bits (1004), Expect = 8.89e-134 Identity = 215/343 (62.68%), Postives = 244/343 (71.14%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 ) HSP 1 Score: 337.4 bits (864), Expect = 1.3e-92 Identity = 163/226 (72.12%), Postives = 197/226 (87.17%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 ) HSP 1 Score: 337.0 bits (863), Expect = 1.7e-92 Identity = 164/232 (70.69%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 ) HSP 1 Score: 283.1 bits (723), Expect = 3.0e-76 Identity = 144/237 (60.76%), Postives = 187/237 (78.90%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 ) HSP 1 Score: 272.3 bits (695), Expect = 5.2e-73 Identity = 137/237 (57.81%), Postives = 180/237 (75.95%), Query Frame = 0
BLAST of Cp4.1LG02g16830.1 vs. TAIR 10
Match: AT1G31885.1 (NOD26-like intrinsic protein 3;1 ) HSP 1 Score: 241.5 bits (615), Expect = 9.9e-64 Identity = 120/228 (52.63%), Postives = 167/228 (73.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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