Cp4.1LG01g22250.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATCCAAAAGTCAACGTAAAGCAAAACCTTTTTTTTTTTTTCTTTGAAATATTCTATACTAAAATTAAGCCTAAATTTCCATTCCATCTCACCAATGGCGATGAGTGATTCGAGATCTTAGGGAGAAATCAACGTCTGAAATTTCATTCGATCAGTGTTTTTCCTTAATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAGCTGAAGAACCAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATTTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGATAACAAGGATCTCATCTTCAATGTAATTAGCAATTTCCTCTATATTCACAAATTATTTTGCTCTTGCGTGTGTGTTTTTTTTCCCTCTTGTTTCCGATTTCTGAATTGATGCGCATGTTCGATGGGTCTTGAGTTAATTTAGTTTTCCCTGGTCTTTCTGCTTCGGATTTTGGATTTGGATGTTTGAAATTTGAGCACCATTTGGCTTGTCACCAGCAGAAATGTTTGGAATGAAATTAACGGTGCTCACTACTTGCTCACCATTGTTAGTTCTTCTCAGCTTCAGCCTGAAATGGCTGTTTAATGTACTCCTGTAGTTTTGAATTGTATGCTCTAAACCCATTGATGAAGCGTAGAGTAATTGGGTCTATTCTTTCTGGGGTTTGGAATTTTCATGACAAATTTAGAGATGAATTTTGAATGGCTGATCATGTCTTGGGGGCAAAAGAAGTCATATGCATATAGACACCTTTTACTGTCAGCCATCTATGATCTGCATTTCTTATCAGTTTCAAAAAGATGGGAGATAATGCAAAATAGAATTCATTCTTTACATGTGGCTCATATCAAGGTCAATAGAATTTTTTGTTATTGACACAGCTTAGCTCGAGTAACATTTGGCTATCTACTATTATTTCTTGTGCCTCTTATATGAATCTAGTAACAAGCATGGTTCGTTCTTAGTATCTAAACTATTTTTTAATGCATATCTTCGTATAATTGTTTATTTTATATTTGATGGCAATCCTAGTGGAGAGTGTTTATTTGAGATCCCACATCGATTGGGGAGGAGAATGAAGCATTCTTTATAAGGGTATGGAAACCTCTCCCTAGCAGACGCATACGCATTTTAAAAACTTTGAGGGGAAGTCTGAAGAGAACAATATCTACTAGCAGTGGGCTTGGGCTGTTACAGTTTGTGTACTCCCGTTCGCTCCCATTCTGGGACTCTACTTAAATAATGCATCTGATGGTCTTGTAGTTTATAAGTTTGGTCTTGTAGTGGATAGAAACCAAGGATATGAGCATAATATTGAAATGGTATTGTCATGAAACTTTTGGATCTAATGATGTCACGCGAGGGAAACATGATTATTATTTTTGCTGTTGATATATTCTATATGCTTTACATAATAGAAACTTTAATTTTTAATTCTTTTTGTCCTTTTATTTTCCTGTTTATTTGGTGAAGTTGCTCCTGTTTTGTAGGTCCATCCTGTTCTTATGGTGATTGGACTTATACTCCTAAATGGTGAAGGTAAATATCTTTTTTCTTTGGACTTAAATTATAGTTTGAAGCACTAGTTTACACACGTTTGGATTCTTCTTCCATTTCGGTTTTGATGCGATGTTTTGTATTTGACTATTTGAATGCATATGTAGGCTGTGAAAATATAATGCTACTATGTTAAAAGTGAGAAATCACTTTTTTATGAGAAACAAACTGCATTTGATAGGAGATATGAAATTACAAAAAAATAAGGGGGGAGGAAAGCCAAATCACATTTGATATAAATAAGCGTTTTTGTGGGCTACGGGTGGAGGGTTATGAGATCGTCACTCAATCCTGGGGAAAGAACTCCCTGAGCCTTAGCTGGAACCTAAACCAAAGCTAAGCTTGTAGGCTCGTAGAGAAAGTCATTTTACAGGTATACCCACGGATCTATGTTCCTGAACAAGCCAAGAAAATTATGAAAACCTCTTTCAGTTGGCACAAAGATAAGAAGGTTGTAAAAAAAAAAAAAGGCTCTTACTAAAGAGCAAGTATTCTTTTGCCTTTCTCTAAAGAGAAATAACAGAGTTGGAGAGTTGGAACTAGTAGATTGTAATTTAAGTGGCTCTTTTGATCTAGAACATTCAGTGTGCTCAATTTTTTCTTCCCTGGGTGGTGGGGTGTAGAGTTGTATGAGAGAGATTGGTACTGTTGTTACTAGTTACTACTGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGAGAAAACTGGGATAATGGGCAAGGATCTTAACAGTATAAAACATTTGCTAGGCTTTGTCATGTAGGTCTTAGGTTTTGTACAGGAAACGTGTTATTTTACGAAACGTGCTGGAGGTCAGGTTTAGAATCATGTATGAAATATGTATCCTGAAATCATTCACAAACTTGAGTTAAAGTTAATTCTCCTACCATTCTGGTGCGTTCAATGGTTCTGTTCACCGTGCTTAGATGTATTGATGCAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTTCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGGTTCGTAAATTGCAATTTCTGCTGGTGTGATGGCATGATTTACTTTTGAGCCCGCTTGTTGAGCTATAACTCATTAGGATGACGCCATTTTAACAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCAGGCGGCTCCAGAAACAGCCGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTCAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCGGTTATCGCTCCATCGAGTAGCAAAGGCGACATTTTCAGGGGGCCAGCTGAATAGGATAAAGAAGCCAATGGAAATGGAACAAGGATTTTTGTTGCGTGACGGATCTTTCCTGCTGTAAACATATCATAATCGAACTTGCCTTTATTTTTGACTCGAGACAGTTAGATTCTTCCATAACACAAAAATCACATCATAGGTTGAGAAGCAAACAGATTCTTTAGTTGAGAATAAGATGTTATATGTTGTCTTTTCACGTGGAGCTATACTCATTTTGGCAAAATTTAAGCTTTGATTTTGAGCAGATCGAAGCTAAGAAAATTTATAGTACAATGATATTACACCTTCAATTTTCATTAAAAAAAAAACGTTAACACATACGTGCAACGTTATTTTATTTGATGGATGTCATACCATTCAAATACTAGCAAAATATCAATATTGAAAAAAAAAAAAAATCCAAACCAAGTTTAGAAAAGTTCATATCTAGTAGTTCGGTCAATTTCAAAAAAGTTAAATATTTTAGTACTGGAAGTTTAGAAACATTCAAAATCAGCCAACACTTATAGCAAGAAAGCTATAGTTCACTATTTATAAGAAATCAGATAAAAAGTTGGGATAGCAAACAGATCATAGAACTATGAAAGCTAAAAGTTCAACTGATAAGAAGAAAACATGTCATGACCAACAAACAAACAGATGTGCCAATAAAAAGAGGGGTAAACTATGGCAATGATATGGCTGTCTGATGGACTGTCTTCTGGATGTAGCGGCCATTTGATTACATGAAACTTGGGCAAACAGGTCCTTTGGAAAGACCAAGGCGGACTTCCATTCCATGGTGCATGTCCAATGGCCTCAAAGATTCAGACTCCCTTGGGTCTGCAAATAACATTGACATAGGAAGTTGTAAATAAACACCAGCAGAGACTATTATCTAAATGGGTATATATAGACTCATGAAAACACGGCGATATAGGACTAGAA TAATCCAAAAGTCAACGTAAAGCAAAACCTTTTTTTTTTTTTCTTTGAAATATTCTATACTAAAATTAAGCCTAAATTTCCATTCCATCTCACCAATGGCGATGAGTGATTCGAGATCTTAGGGAGAAATCAACGTCTGAAATTTCATTCGATCAGTGTTTTTCCTTAATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAGCTGAAGAACCAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATTTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATACTCCTAAATGGTGAAGTTAATTCTCCTACCATTCTGGTGCGTTCAATGGTTCTGTTCACCGTGCTTAGATGTATTGATGCAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTTCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCAGGCGGCTCCAGAAACAGCCGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTCAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCGGTTATCGCTCCATCGAGTAGCAAAGGCGACATTTTCAGGGGGCCAGCTGAATAGGATAAAGAAGCCAATGGAAATGGAACAAGGATTTTTGTTGCGTGACGGATCTTTCCTGCTGTAAACATATCATAATCGAACTTGCCTTTATTTTTGACTCGAGACAGTTAGATTCTTCCATAACACAAAAATCACATCATAGGTTGAGAAGCAAACAGATTCTTTAGTTGAGAATAAGATGTTATATGTTGTCTTTTCACGTGGAGCTATACTCATTTTGGCAAAATTTAAGCTTTGATTTTGAGCAGATCGAAGCTAAGAAAATTTATAGTACAATGATATTACACCTTCAATTTTCATTAAAAAAAAAACGTTAACACATACGTGCAACGTTATTTTATTTGATGGATGTCATACCATTCAAATACTAGCAAAATATCAATATTGAAAAAAAAAAAAAATCCAAACCAAGTTTAGAAAAGTTCATATCTAGTAGTTCGGTCAATTTCAAAAAAGTTAAATATTTTAGTACTGGAAGTTTAGAAACATTCAAAATCAGCCAACACTTATAGCAAGAAAGCTATAGTTCACTATTTATAAGAAATCAGATAAAAAGTTGGGATAGCAAACAGATCATAGAACTATGAAAGCTAAAAGTTCAACTGATAAGAAGAAAACATGTCATGACCAACAAACAAACAGATGTGCCAATAAAAAGAGGGGTAAACTATGGCAATGATATGGCTGTCTGATGGACTGTCTTCTGGATGTAGCGGCCATTTGATTACATGAAACTTGGGCAAACAGGTCCTTTGGAAAGACCAAGGCGGACTTCCATTCCATGGTGCATGTCCAATGGCCTCAAAGATTCAGACTCCCTTGGGTCTGCAAATAACATTGACATAGGAAGTTGTAAATAAACACCAGCAGAGACTATTATCTAAATGGGTATATATAGACTCATGAAAACACGGCGATATAGGACTAGAA ATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAGCTGAAGAACCAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATTTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATACTCCTAAATGGTGAAGTTAATTCTCCTACCATTCTGGTGCGTTCAATGGTTCTGTTCACCGTGCTTAGATGTATTGATGCAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTTCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCAGGCGGCTCCAGAAACAGCCGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTCAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCGGTTATCGCTCCATCGAGTAGCAAAGGCGACATTTTCAGGGGGCCAGCTGAATAG MQLKLASNLPTISSIEDPNTPILSPTISSAEEPMAVPAVQFPIFMAVRVLGMVVATLVFIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEVNSPTILVRSMVLFTVLRCIDAAMLAYKTVSGTKNFRKLVHLAVQFVAFCLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSIFLFGFQWTAGFVTFWYPGGSRNSRSTLLPWHVFFGVYIYGLSIATAVTGLLEKATFLQVSKVILRYSNEALLLNSLGLLIVLLGGLVILAVIAPSSSKGDIFRGPAE Homology
BLAST of Cp4.1LG01g22250.1 vs. ExPASy Swiss-Prot
Match: Q9SWS1 (Transmembrane ascorbate ferrireductase 2 OS=Arabidopsis thaliana OX=3702 GN=CYB561B PE=1 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.7e-85 Identity = 160/249 (64.26%), Postives = 190/249 (76.31%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy Swiss-Prot
Match: Q7XMK3 (Probable ascorbate-specific transmembrane electron transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0533500 PE=2 SV=2) HSP 1 Score: 190.3 bits (482), Expect = 3.1e-47 Identity = 104/235 (44.26%), Postives = 141/235 (60.00%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy Swiss-Prot
Match: A3A9H6 (Probable ascorbate-specific transmembrane electron transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0642300 PE=3 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.5e-46 Identity = 101/235 (42.98%), Postives = 142/235 (60.43%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy Swiss-Prot
Match: Q6I681 (Ascorbate-specific transmembrane electron transporter 1 OS=Zea mays OX=4577 GN=ZCYB PE=1 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.6e-46 Identity = 99/234 (42.31%), Postives = 144/234 (61.54%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy Swiss-Prot
Match: C4IYS8 (Ascorbate-specific transmembrane electron transporter 2 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.6e-46 Identity = 98/234 (41.88%), Postives = 143/234 (61.11%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. NCBI nr
Match: XP_023541096.1 (probable transmembrane ascorbate ferrireductase 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497 bits (1279), Expect = 2.50e-176 Identity = 265/287 (92.33%), Postives = 265/287 (92.33%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. NCBI nr
Match: XP_022989930.1 (probable transmembrane ascorbate ferrireductase 2 [Cucurbita maxima]) HSP 1 Score: 493 bits (1269), Expect = 8.34e-175 Identity = 264/287 (91.99%), Postives = 264/287 (91.99%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. NCBI nr
Match: XP_022956458.1 (probable transmembrane ascorbate ferrireductase 2 [Cucurbita moschata]) HSP 1 Score: 490 bits (1262), Expect = 9.72e-174 Identity = 260/287 (90.59%), Postives = 263/287 (91.64%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. NCBI nr
Match: KAG7033242.1 (putative transmembrane ascorbate ferrireductase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 489 bits (1260), Expect = 1.89e-173 Identity = 260/286 (90.91%), Postives = 262/286 (91.61%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. NCBI nr
Match: KAG6602565.1 (putative transmembrane ascorbate ferrireductase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 488 bits (1257), Expect = 5.62e-173 Identity = 259/287 (90.24%), Postives = 262/287 (91.29%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy TrEMBL
Match: A0A6J1JNQ1 (probable transmembrane ascorbate ferrireductase 2 OS=Cucurbita maxima OX=3661 GN=LOC111486970 PE=4 SV=1) HSP 1 Score: 493 bits (1269), Expect = 4.04e-175 Identity = 264/287 (91.99%), Postives = 264/287 (91.99%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy TrEMBL
Match: A0A6J1GWW7 (probable transmembrane ascorbate ferrireductase 2 OS=Cucurbita moschata OX=3662 GN=LOC111458185 PE=4 SV=1) HSP 1 Score: 490 bits (1262), Expect = 4.71e-174 Identity = 260/287 (90.59%), Postives = 263/287 (91.64%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy TrEMBL
Match: A0A6J1BZR9 (probable transmembrane ascorbate ferrireductase 2 OS=Momordica charantia OX=3673 GN=LOC111006724 PE=4 SV=1) HSP 1 Score: 403 bits (1036), Expect = 3.81e-140 Identity = 207/254 (81.50%), Postives = 221/254 (87.01%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy TrEMBL
Match: A0A6J1K1L7 (probable transmembrane ascorbate ferrireductase 2 OS=Cucurbita maxima OX=3661 GN=LOC111489314 PE=4 SV=1) HSP 1 Score: 399 bits (1024), Expect = 2.56e-138 Identity = 207/254 (81.50%), Postives = 222/254 (87.40%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. ExPASy TrEMBL
Match: Q3LGX4 (Cytochrome b561 OS=Citrullus lanatus OX=3654 GN=CLb561B PE=2 SV=1) HSP 1 Score: 398 bits (1022), Expect = 5.16e-138 Identity = 209/254 (82.28%), Postives = 223/254 (87.80%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. TAIR 10
Match: AT5G38630.1 (cytochrome B561-1 ) HSP 1 Score: 316.2 bits (809), Expect = 2.6e-86 Identity = 160/249 (64.26%), Postives = 190/249 (76.31%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. TAIR 10
Match: AT4G25570.1 (Cytochrome b561/ferric reductase transmembrane protein family ) HSP 1 Score: 180.6 bits (457), Expect = 1.7e-45 Identity = 97/244 (39.75%), Postives = 143/244 (58.61%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. TAIR 10
Match: AT1G26100.1 (Cytochrome b561/ferric reductase transmembrane protein family ) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-41 Identity = 101/242 (41.74%), Postives = 144/242 (59.50%), Query Frame = 0
BLAST of Cp4.1LG01g22250.1 vs. TAIR 10
Match: AT1G14730.1 (Cytochrome b561/ferric reductase transmembrane protein family ) HSP 1 Score: 130.6 bits (327), Expect = 2.1e-30 Identity = 77/227 (33.92%), Postives = 116/227 (51.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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