Cp4.1LG01g10910.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAAAGCGAAGAATATGTTCCTGAAAATCAATACAGCATTGACAAATAAATGGGAGATAAATTCGTCTTGGGATTTACAATTTGTAATTGGAAACTGCAAGATTTAGAGCTAATCCAAATTCAAAGATGGCGGAGGCAGGCGTCAGTTCCGGAAATGCCCGATGGTCTCTCAAGGGCTTCACAGCGCTCGTCACCGGCGGCACTCGTGGAATCGGGTCTGCTAAATTTCTAACTCTATTTCCTCTGAAATCCTCTTTCTGAGTTTGAATTTGGATTCTCTTCTGCTCTGTGTGCGATTTTGTGTGTGTTTTATAGTCGCGCTGTGGTGGAGGAACTAGCCGGTTTAGGCGCGTCGGTCCACACCTGTTCCCGGAACGAACTGGAGCTCAACCAGTGCTTGAAGGAATGGGAGGGCAAAGGCTTTGTGGTCAGTGGTTCGGTTTGCGATGCTTCTTCGAGAACACAGAGAGAGAGGCTCGTACAGGAAGTGGCGTCTGCTTTCAATGGCACCCTCAATATTCTGGTCAGTAATAGTATGCTTCTGCCCATTTTGATTTTAGAGAAGCCATTTGCTAACAGTGTTGAAATTGGGTGTTGTTTGGTGCATGGCTTTGGGTTGGGAATTGAAGCCCTTATATCACTTACATTTTTACATTTCAATGCCATTCTAATTCTGCATGTACGTTAGTTTGGACGCTATGAAAGAAAACACAGATCTAATATATTAATATGTTGATGGCTTGAACTCCATGAAAGATAACAAAAATGGCAGCAAAGTGAGACAAACTTTAGACCTTGACCGAAATGATTAATTGAAACCACTGAAAAGTGATATAAAGTAAGTCATTATAGGCAGGTGCTATAATTTTTCCATACTTGACGTCCACGAAATATTCAGTGCATTGCAATCAAACAATTGAAACTAGGAACAAGAAAGCCTTCTATTGACCTCAAGTGATTCAAACCCTCCATTTTGAAAGCAAGAACATCTCGTTGTTGGCTCCACAATGAAAAACATAATTCTAAGGAAGTTGCCTTCCAGGAATTCTAAACCTACTAGATATTGTTCTCTTTGGACTTTCCTTTTTAGATTTCGCTTCAAGGTTTTTAAAACGCATATGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTTTCCAACCGACGGGGGATCTTACTGTATTTTAGTGTAGGTAAATAATGTGGGAACAAACATCAGGAAGCCAAGTATTGAGTACAGTCTGGAAGAATTTTCGATATTGATGACTACGAACTTTGAATCAGTATTTCATCTATCCCAACTTGCTCATCCTCTTTTAAAAGCTTCTGGAAATGGAAGTATTGTGTTTGTTTCTTCGGTTGGTGGTCTCGTGAGCATTGGAAGTGGATCCATCTATGCAGCCTCTAAATGTGAGTTGCTATTGTAGAATTGTAGCTTATTTTCCTTCGTACGTTCTGAGAAGCTCAAAACTGTTCTTCTTTTTTATTTTCTACTCTCAGCTGCAATGAATCAACTGACCAAAAATCTTGCTTGTGAATGGGCCAAGGACAATATCAGGAGCAACACTGTTGCACCCTGGTATACCAATACCCCCCTTGTAGAAAAGGTAATATTTTCAACAACTCCTGCCAGATAATTCACTCATATTAGTTTATTTTTTGCTCTCGTATCCTCTTTCTGTCTCCTCGTTTGATTCCTTCTTGTCATTAGACTGACTGACCAAGGCATGAGGCGCTCTGTCATTAATCTCAGTATCTGGGATGCTTTTAATCTGATGCATCTTTCTGTGAAATCTCTATGAATGTCAAATTGATTAATTGAGTCACCTCGGCAAAATATGACTTGGTAACTGTTGTTCAAGCTTGAAAACATATGGTTAATTAATGGCATTATTCTTTCTGTCTTTCTTGTTTATCACGCTTCTGTTTTTGTGCCTTTTTTTTCCTGATTGAAGGCTGCCCATGTAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAACATGCCCTTTCGAGCGGGTATGAGGATATGAATCTTAGTGTGCACAAACACGCAATTCCATATTTTTAATAGTGTACATTTTGATTCTCAAATTTATTTGTACCAACATCTAGTGACGTAACATTTTGCAATTCTATATCGTTGAGTCCAACATCTTTCCATCTTTAGAACTGAAGAACACTGTTGTACAATCTATAGAACAAATTCTGTTCAAATAACCTGGTCTGAGATTGTCCATCTTTGTTGCATGTTTTTGTTTTTTCAGTTCAACCCCAAAACCTGTTGAATGTTAACTAATAACAATGGTTATTATCATTGTAGTTGCTTGATAATAAGACGTTCGTGGACAAGGTAGTCTCTCGAACTCCACTTGGGCGAATAGGGGAATCAAATGAAGTGTCCTCGTTGGTGGCATTCCTTTGCATGCCTGCTGCATCTTACATCACTGGACAGATTATTTCTGTTGATGGAGGGTTCACTGCCAATGGATTTGAGTCTGGTATGAGACTAGACAGCTTGTGAAACATGCTTCTGCTTCTTACATCACTGGGCAGACTAATTCCATAATAATCTTTTATGCTTATCATGTTTTTCTCAACTCTTTCAAGTTTTATGTAAACTCTATGTAATAATTCTAAATAATTTAATGTGCACAATATTGAACTAAAAAAATAATTTTAAAAGTTTTATTTTAGGGTCTTATGCACCATGTAAATATACTCTAAAAATTTATTGAGAAAATGTTAATACATGCTATATTTTTTTTTTTATTTATAAAAAATTAACAATAAACAATCGATAGGGACTTAAGATTTGATATAATTACAAATACTAAAATTTGATATTTTAAAGTACAAAAAGTACACAAGAACGGACTAAATTGACATTTTAACCTAAACAAATTATAACGGGAAAACATGAGAAATGTACTACAAAAAAAATTATTAAAAAAGATTGAATGAGGATTGAATGTGTTTCTGATGCTTGACTTGGTGTATGATCAATTGTTTACAATCTATAGTTCGTTCTCCAATTTGCAGTCAAGCTGCAGTGATGCTATGCCATCTACCTTCTTCTAAACTTCAAAAACAACCCACTATGGCACCAAATCTACGCTTTCATATGCTGTACCATCTGACGGCGCCAACCAAATGAAGACCAGCGGTTGTGTGCCAAAGCATACATTAATTTGATGCTTTCTTCATCTCTGTAGGTGGGAAATTAGCCTGTGTTTACTCTCCACTTGCTTCTCATTTTCAGTAATGAGCTAAAGGACTTGTACTTAACTCAGCACATCCTGCAATTTTCGCGTACGAATCGGGCGTTTTTCACCAACCAGTATCCTATAGCTCGCATGATGCCCCTCAGATGTATGACGCAGGGCAACATGCCAACCCATTGCCTTTCCGATGGCTTGAAGCTCATCCATGACAGCAATAGTATCACGAATGTATACATGGCCCCCAGGCCTTAAGATCCGTTCCATCTCGAGCATGATTGTCGACATATTGCATCTGATATCAGTAATTAAAGAGAGAAGGAAGTAAGCAACAGAATATAA AAAAGAAAGCGAAGAATATGTTCCTGAAAATCAATACAGCATTGACAAATAAATGGGAGATAAATTCGTCTTGGGATTTACAATTTGTAATTGGAAACTGCAAGATTTAGAGCTAATCCAAATTCAAAGATGGCGGAGGCAGGCGTCAGTTCCGGAAATGCCCGATGGTCTCTCAAGGGCTTCACAGCGCTCGTCACCGGCGGCACTCGTGGAATCGGTCGCGCTGTGGTGGAGGAACTAGCCGGTTTAGGCGCGTCGGTCCACACCTGTTCCCGGAACGAACTGGAGCTCAACCAGTGCTTGAAGGAATGGGAGGGCAAAGGCTTTGTGGTCAGTGGTTCGGTTTGCGATGCTTCTTCGAGAACACAGAGAGAGAGGCTCGTACAGGAAGTGGCGTCTGCTTTCAATGGCACCCTCAATATTCTGGTCAGTAATAGTATGCTTCTGCCCATTTTGATTTTAGAGAAGCCATTTGCTAACAGTGTTGAAATTGGGTGTTGTTTGGTGCATGGCTTTGGGTTGGGAATTGAAGCCCTTATATCACTTACATTTTTACATTTCAATGCCATTCTAATTCTGCATGTACTATTTCATCTATCCCAACTTGCTCATCCTCTTTTAAAAGCTTCTGGAAATGGAAGTATTGTGTTTGTTTCTTCGGTTGGTGGTCTCGTGAGCATTGGAAGTGGATCCATCTATGCAGCCTCTAAATCTGCAATGAATCAACTGACCAAAAATCTTGCTTGTGAATGGGCCAAGGACAATATCAGGAGCAACACTGTTGCACCCTGGTATACCAATACCCCCCTTGTAGAAAAGTTGCTTGATAATAAGACGTTCGTGGACAAGGTAGTCTCTCGAACTCCACTTGGGCGAATAGGGGAATCAAATGAAGTGTCCTCGTTGGTGGCATTCCTTTGCATGCCTGCTGCATCTTACATCACTGGACAGATTATTTCTGTTGATGGAGGGTTCACTGCCAATGGATTTGAGTCTGGTATGAGACTAGACAGCTTGTGAAACATGCTTCTGCTTCTTACATCACTGGGCAGACTAATTCCATAATAATCTTTTATGCTTATCATGTTTTTCTCAACTCTTTCAAGTTTTATGTAAACTCTATGTAATAATTCTAAATAATTTAATGTGCACAATATTGAACTAAAAAAATAATTTTAAAAGTTTTATTTTAGGGTCTTATGCACCATGTAAATATACTCTAAAAATTTATTGAGAAAATGTTAATACATGCTATATTTTTTTTTTTATTTATAAAAAATTAACAATAAACAATCGATAGGGACTTAAGATTTGATATAATTACAAATACTAAAATTTGATATTTTAAAGTACAAAAAGTACACAAGAACGGACTAAATTGACATTTTAACCTAAACAAATTATAACGGGAAAACATGAGAAATGTACTACAAAAAAAATTATTAAAAAAGATTGAATGAGGATTGAATGTGTTTCTGATGCTTGACTTGGTGTATGATCAATTGTTTACAATCTATAGTTCGTTCTCCAATTTGCAGTCAAGCTGCAGTGATGCTATGCCATCTACCTTCTTCTAAACTTCAAAAACAACCCACTATGGCACCAAATCTACGCTTTCATATGCTGTACCATCTGACGGCGCCAACCAAATGAAGACCAGCGGTTGTGTGCCAAAGCATACATTAATTTGATGCTTTCTTCATCTCTGTAGGTGGGAAATTAGCCTGTGTTTACTCTCCACTTGCTTCTCATTTTCAGTAATGAGCTAAAGGACTTGTACTTAACTCAGCACATCCTGCAATTTTCGCGTACGAATCGGGCGTTTTTCACCAACCAGTATCCTATAGCTCGCATGATGCCCCTCAGATGTATGACGCAGGGCAACATGCCAACCCATTGCCTTTCCGATGGCTTGAAGCTCATCCATGACAGCAATAGTATCACGAATGTATACATGGCCCCCAGGCCTTAAGATCCGTTCCATCTCGAGCATGATTGTCGACATATTGCATCTGATATCAGTAATTAAAGAGAGAAGGAAGTAAGCAACAGAATATAA ATGGCGGAGGCAGGCGTCAGTTCCGGAAATGCCCGATGGTCTCTCAAGGGCTTCACAGCGCTCGTCACCGGCGGCACTCGTGGAATCGGTCGCGCTGTGGTGGAGGAACTAGCCGGTTTAGGCGCGTCGGTCCACACCTGTTCCCGGAACGAACTGGAGCTCAACCAGTGCTTGAAGGAATGGGAGGGCAAAGGCTTTGTGGTCAGTGGTTCGGTTTGCGATGCTTCTTCGAGAACACAGAGAGAGAGGCTCGTACAGGAAGTGGCGTCTGCTTTCAATGGCACCCTCAATATTCTGGTCAGTAATAGTATGCTTCTGCCCATTTTGATTTTAGAGAAGCCATTTGCTAACAGTGTTGAAATTGGGTGTTGTTTGGTGCATGGCTTTGGGTTGGGAATTGAAGCCCTTATATCACTTACATTTTTACATTTCAATGCCATTCTAATTCTGCATGTACTATTTCATCTATCCCAACTTGCTCATCCTCTTTTAAAAGCTTCTGGAAATGGAAGTATTGTGTTTGTTTCTTCGGTTGGTGGTCTCGTGAGCATTGGAAGTGGATCCATCTATGCAGCCTCTAAATCTGCAATGAATCAACTGACCAAAAATCTTGCTTGTGAATGGGCCAAGGACAATATCAGGAGCAACACTGTTGCACCCTGGTATACCAATACCCCCCTTGTAGAAAAGTTGCTTGATAATAAGACGTTCGTGGACAAGGTAGTCTCTCGAACTCCACTTGGGCGAATAGGGGAATCAAATGAAGTGTCCTCGTTGGTGGCATTCCTTTGCATGCCTGCTGCATCTTACATCACTGGACAGATTATTTCTGTTGATGGAGGGTTCACTGCCAATGGATTTGAGTCTGGTATGAGACTAGACAGCTTGTGA MAEAGVSSGNARWSLKGFTALVTGGTRGIGRAVVEELAGLGASVHTCSRNELELNQCLKEWEGKGFVVSGSVCDASSRTQRERLVQEVASAFNGTLNILVSNSMLLPILILEKPFANSVEIGCCLVHGFGLGIEALISLTFLHFNAILILHVLFHLSQLAHPLLKASGNGSIVFVSSVGGLVSIGSGSIYAASKSAMNQLTKNLACEWAKDNIRSNTVAPWYTNTPLVEKLLDNKTFVDKVVSRTPLGRIGESNEVSSLVAFLCMPAASYITGQIISVDGGFTANGFESGMRLDSL Homology
BLAST of Cp4.1LG01g10910.1 vs. ExPASy Swiss-Prot
Match: Q9LHT0 (Tropinone reductase homolog At5g06060 OS=Arabidopsis thaliana OX=3702 GN=At5g06060 PE=2 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 8.3e-88 Identity = 179/281 (63.70%), Postives = 205/281 (72.95%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy Swiss-Prot
Match: Q9ZW19 (Tropinone reductase homolog At2g29360 OS=Arabidopsis thaliana OX=3702 GN=SDR PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77 Identity = 160/290 (55.17%), Postives = 199/290 (68.62%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy Swiss-Prot
Match: F4IKM1 (Tropinone reductase homolog At2g29340 OS=Arabidopsis thaliana OX=3702 GN=At2g29340 PE=2 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.9e-76 Identity = 156/276 (56.52%), Postives = 187/276 (67.75%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy Swiss-Prot
Match: Q9ZW12 (Tropinone reductase homolog At2g29260, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g29260 PE=2 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.8e-75 Identity = 150/279 (53.76%), Postives = 194/279 (69.53%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy Swiss-Prot
Match: Q9ZW20 (Tropinone reductase homolog At2g29370 OS=Arabidopsis thaliana OX=3702 GN=At2g29370 PE=3 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 4.7e-75 Identity = 157/291 (53.95%), Postives = 199/291 (68.38%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. NCBI nr
Match: XP_023547195.1 (tropinone reductase homolog At5g06060 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 457 bits (1175), Expect = 3.33e-160 Identity = 251/296 (84.80%), Postives = 258/296 (87.16%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. NCBI nr
Match: KAG6600980.1 (Tropinone reductase-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031592.1 Tropinone reductase-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 455 bits (1171), Expect = 1.35e-159 Identity = 249/296 (84.12%), Postives = 258/296 (87.16%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. NCBI nr
Match: XP_022956657.1 (tropinone reductase homolog At5g06060 [Cucurbita moschata]) HSP 1 Score: 455 bits (1170), Expect = 1.92e-159 Identity = 249/296 (84.12%), Postives = 258/296 (87.16%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. NCBI nr
Match: XP_022976820.1 (tropinone reductase homolog At5g06060 [Cucurbita maxima]) HSP 1 Score: 450 bits (1158), Expect = 1.29e-157 Identity = 247/296 (83.45%), Postives = 257/296 (86.82%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. NCBI nr
Match: XP_022139331.1 (tropinone reductase homolog At5g06060 [Momordica charantia]) HSP 1 Score: 418 bits (1074), Expect = 7.94e-145 Identity = 228/296 (77.03%), Postives = 246/296 (83.11%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy TrEMBL
Match: A0A6J1GWZ5 (tropinone reductase homolog At5g06060 OS=Cucurbita moschata OX=3662 GN=LOC111458319 PE=4 SV=1) HSP 1 Score: 455 bits (1170), Expect = 9.31e-160 Identity = 249/296 (84.12%), Postives = 258/296 (87.16%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy TrEMBL
Match: A0A6J1IKI1 (tropinone reductase homolog At5g06060 OS=Cucurbita maxima OX=3661 GN=LOC111477082 PE=4 SV=1) HSP 1 Score: 450 bits (1158), Expect = 6.26e-158 Identity = 247/296 (83.45%), Postives = 257/296 (86.82%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy TrEMBL
Match: A0A6J1CCC2 (tropinone reductase homolog At5g06060 OS=Momordica charantia OX=3673 GN=LOC111010272 PE=4 SV=1) HSP 1 Score: 418 bits (1074), Expect = 3.85e-145 Identity = 228/296 (77.03%), Postives = 246/296 (83.11%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy TrEMBL
Match: A0A0A0KS92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G184270 PE=4 SV=1) HSP 1 Score: 404 bits (1038), Expect = 1.16e-139 Identity = 216/296 (72.97%), Postives = 241/296 (81.42%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. ExPASy TrEMBL
Match: A0A5D3BV45 (Tropinone reductase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00720 PE=4 SV=1) HSP 1 Score: 399 bits (1026), Expect = 7.75e-138 Identity = 216/296 (72.97%), Postives = 240/296 (81.08%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. TAIR 10
Match: AT5G06060.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 325.1 bits (832), Expect = 5.9e-89 Identity = 179/281 (63.70%), Postives = 205/281 (72.95%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. TAIR 10
Match: AT2G29360.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 291.2 bits (744), Expect = 9.4e-79 Identity = 160/290 (55.17%), Postives = 199/290 (68.62%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. TAIR 10
Match: AT2G29340.2 (NAD-dependent epimerase/dehydratase family protein ) HSP 1 Score: 287.3 bits (734), Expect = 1.4e-77 Identity = 156/276 (56.52%), Postives = 187/276 (67.75%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. TAIR 10
Match: AT2G29340.1 (NAD-dependent epimerase/dehydratase family protein ) HSP 1 Score: 287.3 bits (734), Expect = 1.4e-77 Identity = 156/276 (56.52%), Postives = 187/276 (67.75%), Query Frame = 0
BLAST of Cp4.1LG01g10910.1 vs. TAIR 10
Match: AT2G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 283.5 bits (724), Expect = 2.0e-76 Identity = 150/279 (53.76%), Postives = 194/279 (69.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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