CmoCh20G005780.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G005780.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr20: 2841594 .. 2842675 (+)
Sequence length402
RNA-Seq ExpressionCmoCh20G005780.1
SyntenyCmoCh20G005780.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCGAGTAATTCATAAGGACATACAGCATACCTGTCACAGGATTTGCAAGAGACCTGGCCTGCGGATTTTGGGGTTTCTGCCTTGGAAGGAGTTTTCACGGGTTTCTTGGCAGGGTGGGGAGTATCTGTATGGCCCCCCTTCTTCGAACCTGTTAGACATGTTAAGCACCAATTTGATTCAGTGGAGGAGCAATGGCGTGGCGGGACAAAGTTTATAGGCTACAAAGGTTTCTAAAGCTAGGCTAGGCTAACATTGTGTGTTCAGTGCATAAACAAAGAGATAAGCTAACAGAACACGCCACTCTAGAGATGATTAGATACTTTTAACGCTCAATACATATCAGCATGTTAAAATTGGGTTTAAATATTATTTTGGTTTCTATACTTTTGTTCATTAGTCACTTTTACAAAGTATCCATTTTGATCATCATTAGTGAATTCAATGCACAAAAATACAAATTTATGTCTACATCCTAAGAAGTTGTCATGCCTAAAATTTAAACCAATGAGTGTGCAAAGACCAAAATGAACAAAAGTAAAGAATACATGGATCACAATGAACATTCTAAACATACTGACACTAAAATGAACTAAATTCTAAAATACACTGACCAAACTAGTATTTAAACCCGAAACTAAAATGTGGTTCAGTCAACAATGAAATAATGCTCATTAATGTTATCATGAAATAAATGAATGTTTGATAGAGTCACCGGTCTTCTCAGCCGAAGCTACTTTTGCCTTCTTGGAAACAGGAGTCTTTGAGGCAGACTCGTTTGGCCTCTTCTTGGCTGATTCAACCTACAAGAGGACACCAAATGATAAAAATGATGCTAAAAGAAGAAAAAATGTACAAGAATAAACATGGGTTTGTCAAATTTTCAAATAAACTGCTACAAATAGAAGTTCAACTAGGATTGAAACACACCTTCTTTGGTGTCTCCTCCTCACTTTCAGTACCGTCATCTTCATCGTCAGAGTCACTGTCAGCTCCAAGCATTTCCTGCAATTTATCGATAGCACCATTAGCACATATAAGGAACTTCCATCATCTAACAAAATCCTTGGCAACCTATAA

mRNA sequence

ATGGTGCGAGTAATTCATAAGGACATACAGCATACCTGTCACAGGATTTGCAAGAGACCTGGCCTGCGGATTTTGGGGTTTCTGCCTTGGAAGGAGTTTTCACGGGTTTCTTGGCAGGGTGGGGAGTATCTGTATGGCCCCCCTTCTTCGAACCTGTTAGACATGTTAAGCACCAATTTGATTCAGTGGAGGAGCAATGGCGTGGCGGGACAAAAGTCACCGGTCTTCTCAGCCGAAGCTACTTTTGCCTTCTTGGAAACAGGAGTCTTTGAGGCAGACTCTACCGTCATCTTCATCGTCAGAGTCACTGTCAGCTCCAAGCATTTCCTGCAATTTATCGATAGCACCATTAGCACATATAAGGAACTTCCATCATCTAACAAAATCCTTGGCAACCTATAA

Coding sequence (CDS)

ATGGTGCGAGTAATTCATAAGGACATACAGCATACCTGTCACAGGATTTGCAAGAGACCTGGCCTGCGGATTTTGGGGTTTCTGCCTTGGAAGGAGTTTTCACGGGTTTCTTGGCAGGGTGGGGAGTATCTGTATGGCCCCCCTTCTTCGAACCTGTTAGACATGTTAAGCACCAATTTGATTCAGTGGAGGAGCAATGGCGTGGCGGGACAAAAGTCACCGGTCTTCTCAGCCGAAGCTACTTTTGCCTTCTTGGAAACAGGAGTCTTTGAGGCAGACTCTACCGTCATCTTCATCGTCAGAGTCACTGTCAGCTCCAAGCATTTCCTGCAATTTATCGATAGCACCATTAGCACATATAAGGAACTTCCATCATCTAACAAAATCCTTGGCAACCTATAA

Protein sequence

MVRVIHKDIQHTCHRICKRPGLRILGFLPWKEFSRVSWQGGEYLYGPPSSNLLDMLSTNLIQWRSNGVAGQKSPVFSAEATFAFLETGVFEADSTVIFIVRVTVSSKHFLQFIDSTISTYKELPSSNKILGNL
Homology
The following BLAST results are available for this feature:
BLAST of CmoCh20G005780.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G005780.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G005780.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G005780.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh20G005780CmoCh20G005780gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh20G005780.1:exon:2653CmoCh20G005780.1:exon:2653exon
CmoCh20G005780.1:exon:2652CmoCh20G005780.1:exon:2652exon
CmoCh20G005780.1:exon:2651CmoCh20G005780.1:exon:2651exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh20G005780.1:cdsCmoCh20G005780.1:cdsCDS
CmoCh20G005780.1:cdsCmoCh20G005780.1:cds_2CDS
CmoCh20G005780.1:cdsCmoCh20G005780.1:cds_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh20G005780.1CmoCh20G005780.1-proteinpolypeptide