CmoCh17G004880.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh17G004880.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionDUF761 domain-containing protein
LocationCmo_Chr17: 3791992 .. 3793899 (+)
Sequence length1908
RNA-Seq ExpressionCmoCh17G004880.1
SyntenyCmoCh17G004880.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGAATTGTTGTGTTTATGGGAAGCAATAACTTTACCTTGTCTTCAAGTCTTCCTTTCTTCTTCATCAACATTTTCTCTCAAACCTCAAAATCCCAATTCCACAGCTCTCCAGCAATCCTCATCAATGGCGTCTTCAGCTTCTAGCCCCTTCACGAAGCTCCATTTCCCCCATTCTCCACTTCCACAACCACCAGCCAACTCCTGCGCACAGTTTCTCTGTAAATCCATCTTCTTCTGCTTTTTTCTCCTCCTCCTCCCTCTCTTCCCTTCCGAAGCTCCAGATTTCGTCGATCAGACTTTGTTCACCAAATTCTGGGAGCTTTTTCACCTCATGTTCGTCGGCATTGCTGTTTCCTATGGTCTCTTCAGCACAAGGAACAACCAGATGAATGTAGACGAACCTCGCTACTCCAGTTTTGAGAATCCGCAGTCTTATTTGTCTAAGATGCTTTACGTCGCTTCAATTTTTGATGATGTTGACGATTTTGGTGTTTCTGATGAAAGGAAAGTGAGTGAAGTTCTGTACATTCAGCCGAAACTTGGATCTGCGAGTGATTTGAATGCGCAATCTCGCCACCAGGAAAAACTCCGTTATTCAATGCCGAAAAAAAGGTACGAAAATTCTTATGAATTTGCTGATACTGATAATGTCGCTCATGCATGTAAATCGAGATATACTCGTGGTGGATCTGTGGTGGTTGTGCCTGAAACAAATCGTAGTTCATCAGGAGGCATTGTAAATTATAAACCTCTAGGTTTGCCTGTTAGGAGTCTGAGATCGAGTCTTACTGAATCCGACGATGTCGAATTCGATTGTGGTGATGAATCTTGTTTGAGTTCTAAAAGTTCACCCAAAAGCTCTGAGAATAATTGTGAAGGAAATAGTGAATTTGGTGATAATTGTTGTGTGAATTTGGAGGAGAAGTTTGATGAGACTGCAATTGCATCAATGTCCTCATTTCAATTGCGTGAGAAATTTGGAAAGAAGGTGATAAGAGAGAGAGGATTCGGGAATGCTGTTCTTCGCCCTTCCCATTTTAGACCTCCCTCCATTGATGAAACTCAATTTGAATCCCTGAAAAAATCAGGATCTCTTCATTCTTATCTATCTCAGTCATCACAAACTAGTTCCCTCTCTTCTCCGTTGTCATCGACGACGAGAAAGCCCCGTAAAATGTCGTCACTCAGTAACATTTCCTATAAGTCGTTGCATTCTCGACAATACAGTACGAGTTCTCTGTCTGAAAACAGTAGAGGGAGCTCTGAAGACCCTCTGATTGAACAAGAAAACTCATCCGAGTGCAATGAATCCGTGGTGAGTTCGCCACGTTCGGACAGGAATTTCGCAAGTATTCCAAAAGCATTATCCCAAGGAAAATCGGTTCGAAGAATTCGAGCAAATGCAGCTGCCATAGAGGATATGAAAGCTCAAGAGATGCACAGAAAGCAAGTTAAACATGATGACATTATAGGGAATAAGTTTGAAGAAGGTGGAATGTCACCACCATATATGAGAGAAGATGGAACGGGACAGGGATGGCCTGATGTTGTTAACCCAAATGCTGGTAATATGAATCGTTTTCCAAAGACGACGTTCTTGGGGATTAAGGAGCAGAAGGAAGAGACAGAGAGTCTGGTGGCAGATGATAGTAAAGATGACTCTGAGGGGGAGGATGAAAGTTTGTTTGCAAGTTCAGATGAAGAAGCTGGTTCAAGTATGGCTGGAGATTCGGAGTCGGGGGCTTTCGAGGTCGACAAGAAGGCGGGCGAGTTCATAGCCAAGTTCAGGGAGCAAATACAGCTTCAGAGGATGGCTTCAGTTGAAAAAAGATTGAGAGGAGGAGGAGGAGGAGGAGGAGGATGGGGGTCATTCAGCAGCACAAGCAGCAGCTATTTCAGTTGA

mRNA sequence

ATGATAGAATTGTTGTGTTTATGGGAAGCAATAACTTTACCTTGTCTTCAAGTCTTCCTTTCTTCTTCATCAACATTTTCTCTCAAACCTCAAAATCCCAATTCCACAGCTCTCCAGCAATCCTCATCAATGGCGTCTTCAGCTTCTAGCCCCTTCACGAAGCTCCATTTCCCCCATTCTCCACTTCCACAACCACCAGCCAACTCCTGCGCACAGTTTCTCTGTAAATCCATCTTCTTCTGCTTTTTTCTCCTCCTCCTCCCTCTCTTCCCTTCCGAAGCTCCAGATTTCGTCGATCAGACTTTGTTCACCAAATTCTGGGAGCTTTTTCACCTCATGTTCGTCGGCATTGCTGTTTCCTATGGTCTCTTCAGCACAAGGAACAACCAGATGAATGTAGACGAACCTCGCTACTCCAGTTTTGAGAATCCGCAGTCTTATTTGTCTAAGATGCTTTACGTCGCTTCAATTTTTGATGATGTTGACGATTTTGGTGTTTCTGATGAAAGGAAAGTGAGTGAAGTTCTGTACATTCAGCCGAAACTTGGATCTGCGAGTGATTTGAATGCGCAATCTCGCCACCAGGAAAAACTCCGTTATTCAATGCCGAAAAAAAGGTACGAAAATTCTTATGAATTTGCTGATACTGATAATGTCGCTCATGCATGTAAATCGAGATATACTCGTGGTGGATCTGTGGTGGTTGTGCCTGAAACAAATCGTAGTTCATCAGGAGGCATTGTAAATTATAAACCTCTAGGTTTGCCTGTTAGGAGTCTGAGATCGAGTCTTACTGAATCCGACGATGTCGAATTCGATTGTGGTGATGAATCTTGTTTGAGTTCTAAAAGTTCACCCAAAAGCTCTGAGAATAATTGTGAAGGAAATAGTGAATTTGGTGATAATTGTTGTGTGAATTTGGAGGAGAAGTTTGATGAGACTGCAATTGCATCAATGTCCTCATTTCAATTGCGTGAGAAATTTGGAAAGAAGGTGATAAGAGAGAGAGGATTCGGGAATGCTGTTCTTCGCCCTTCCCATTTTAGACCTCCCTCCATTGATGAAACTCAATTTGAATCCCTGAAAAAATCAGGATCTCTTCATTCTTATCTATCTCAGTCATCACAAACTAGTTCCCTCTCTTCTCCGTTGTCATCGACGACGAGAAAGCCCCGTAAAATGTCGTCACTCAGTAACATTTCCTATAAGTCGTTGCATTCTCGACAATACAGTACGAGTTCTCTGTCTGAAAACAGTAGAGGGAGCTCTGAAGACCCTCTGATTGAACAAGAAAACTCATCCGAGTGCAATGAATCCGTGGTGAGTTCGCCACGTTCGGACAGGAATTTCGCAAGTATTCCAAAAGCATTATCCCAAGGAAAATCGGTTCGAAGAATTCGAGCAAATGCAGCTGCCATAGAGGATATGAAAGCTCAAGAGATGCACAGAAAGCAAGTTAAACATGATGACATTATAGGGAATAAGTTTGAAGAAGGTGGAATGTCACCACCATATATGAGAGAAGATGGAACGGGACAGGGATGGCCTGATGTTGTTAACCCAAATGCTGGTAATATGAATCGTTTTCCAAAGACGACGTTCTTGGGGATTAAGGAGCAGAAGGAAGAGACAGAGAGTCTGGTGGCAGATGATAGTAAAGATGACTCTGAGGGGGAGGATGAAAGTTTGTTTGCAAGTTCAGATGAAGAAGCTGGTTCAAGTATGGCTGGAGATTCGGAGTCGGGGGCTTTCGAGGTCGACAAGAAGGCGGGCGAGTTCATAGCCAAGTTCAGGGAGCAAATACAGCTTCAGAGGATGGCTTCAGTTGAAAAAAGATTGAGAGGAGGAGGAGGAGGAGGAGGAGGATGGGGGTCATTCAGCAGCACAAGCAGCAGCTATTTCAGTTGA

Coding sequence (CDS)

ATGATAGAATTGTTGTGTTTATGGGAAGCAATAACTTTACCTTGTCTTCAAGTCTTCCTTTCTTCTTCATCAACATTTTCTCTCAAACCTCAAAATCCCAATTCCACAGCTCTCCAGCAATCCTCATCAATGGCGTCTTCAGCTTCTAGCCCCTTCACGAAGCTCCATTTCCCCCATTCTCCACTTCCACAACCACCAGCCAACTCCTGCGCACAGTTTCTCTGTAAATCCATCTTCTTCTGCTTTTTTCTCCTCCTCCTCCCTCTCTTCCCTTCCGAAGCTCCAGATTTCGTCGATCAGACTTTGTTCACCAAATTCTGGGAGCTTTTTCACCTCATGTTCGTCGGCATTGCTGTTTCCTATGGTCTCTTCAGCACAAGGAACAACCAGATGAATGTAGACGAACCTCGCTACTCCAGTTTTGAGAATCCGCAGTCTTATTTGTCTAAGATGCTTTACGTCGCTTCAATTTTTGATGATGTTGACGATTTTGGTGTTTCTGATGAAAGGAAAGTGAGTGAAGTTCTGTACATTCAGCCGAAACTTGGATCTGCGAGTGATTTGAATGCGCAATCTCGCCACCAGGAAAAACTCCGTTATTCAATGCCGAAAAAAAGGTACGAAAATTCTTATGAATTTGCTGATACTGATAATGTCGCTCATGCATGTAAATCGAGATATACTCGTGGTGGATCTGTGGTGGTTGTGCCTGAAACAAATCGTAGTTCATCAGGAGGCATTGTAAATTATAAACCTCTAGGTTTGCCTGTTAGGAGTCTGAGATCGAGTCTTACTGAATCCGACGATGTCGAATTCGATTGTGGTGATGAATCTTGTTTGAGTTCTAAAAGTTCACCCAAAAGCTCTGAGAATAATTGTGAAGGAAATAGTGAATTTGGTGATAATTGTTGTGTGAATTTGGAGGAGAAGTTTGATGAGACTGCAATTGCATCAATGTCCTCATTTCAATTGCGTGAGAAATTTGGAAAGAAGGTGATAAGAGAGAGAGGATTCGGGAATGCTGTTCTTCGCCCTTCCCATTTTAGACCTCCCTCCATTGATGAAACTCAATTTGAATCCCTGAAAAAATCAGGATCTCTTCATTCTTATCTATCTCAGTCATCACAAACTAGTTCCCTCTCTTCTCCGTTGTCATCGACGACGAGAAAGCCCCGTAAAATGTCGTCACTCAGTAACATTTCCTATAAGTCGTTGCATTCTCGACAATACAGTACGAGTTCTCTGTCTGAAAACAGTAGAGGGAGCTCTGAAGACCCTCTGATTGAACAAGAAAACTCATCCGAGTGCAATGAATCCGTGGTGAGTTCGCCACGTTCGGACAGGAATTTCGCAAGTATTCCAAAAGCATTATCCCAAGGAAAATCGGTTCGAAGAATTCGAGCAAATGCAGCTGCCATAGAGGATATGAAAGCTCAAGAGATGCACAGAAAGCAAGTTAAACATGATGACATTATAGGGAATAAGTTTGAAGAAGGTGGAATGTCACCACCATATATGAGAGAAGATGGAACGGGACAGGGATGGCCTGATGTTGTTAACCCAAATGCTGGTAATATGAATCGTTTTCCAAAGACGACGTTCTTGGGGATTAAGGAGCAGAAGGAAGAGACAGAGAGTCTGGTGGCAGATGATAGTAAAGATGACTCTGAGGGGGAGGATGAAAGTTTGTTTGCAAGTTCAGATGAAGAAGCTGGTTCAAGTATGGCTGGAGATTCGGAGTCGGGGGCTTTCGAGGTCGACAAGAAGGCGGGCGAGTTCATAGCCAAGTTCAGGGAGCAAATACAGCTTCAGAGGATGGCTTCAGTTGAAAAAAGATTGAGAGGAGGAGGAGGAGGAGGAGGAGGATGGGGGTCATTCAGCAGCACAAGCAGCAGCTATTTCAGTTGA

Protein sequence

MIELLCLWEAITLPCLQVFLSSSSTFSLKPQNPNSTALQQSSSMASSASSPFTKLHFPHSPLPQPPANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVDQTLFTKFWELFHLMFVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFDDVDDFGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTDNVAHACKSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLRSSLTESDDVEFDCGDESCLSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFGNAVLRPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKPRKMSSLSNISYKSLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFASIPKALSQGKSVRRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGTGQGWPDVVNPNAGNMNRFPKTTFLGIKEQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSSTSSSYFS
Homology
BLAST of CmoCh17G004880.1 vs. ExPASy TrEMBL
Match: A0A6J1H4M0 (uncharacterized protein LOC111459998 OS=Cucurbita moschata OX=3662 GN=LOC111459998 PE=4 SV=1)

HSP 1 Score: 1132.5 bits (2928), Expect = 0.0e+00
Identity = 592/592 (100.00%), Postives = 592/592 (100.00%), Query Frame = 0

Query: 44  MASSASSPFTKLHFPHSPLPQPPANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVDQTLF 103
           MASSASSPFTKLHFPHSPLPQPPANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVDQTLF
Sbjct: 1   MASSASSPFTKLHFPHSPLPQPPANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVDQTLF 60

Query: 104 TKFWELFHLMFVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFDDVDD 163
           TKFWELFHLMFVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFDDVDD
Sbjct: 61  TKFWELFHLMFVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFDDVDD 120

Query: 164 FGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTDNVAHAC 223
           FGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTDNVAHAC
Sbjct: 121 FGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTDNVAHAC 180

Query: 224 KSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLRSSLTESDDVEFDCGDESCLSSK 283
           KSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLRSSLTESDDVEFDCGDESCLSSK
Sbjct: 181 KSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLRSSLTESDDVEFDCGDESCLSSK 240

Query: 284 SSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFGNAVL 343
           SSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFGNAVL
Sbjct: 241 SSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFGNAVL 300

Query: 344 RPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKPRKMSSLSNISYK 403
           RPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKPRKMSSLSNISYK
Sbjct: 301 RPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKPRKMSSLSNISYK 360

Query: 404 SLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFASIPKALSQGKSV 463
           SLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFASIPKALSQGKSV
Sbjct: 361 SLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFASIPKALSQGKSV 420

Query: 464 RRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGTGQGWPDVVNPNA 523
           RRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGTGQGWPDVVNPNA
Sbjct: 421 RRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGTGQGWPDVVNPNA 480

Query: 524 GNMNRFPKTTFLGIKEQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSESGA 583
           GNMNRFPKTTFLGIKEQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSESGA
Sbjct: 481 GNMNRFPKTTFLGIKEQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSESGA 540

Query: 584 FEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSSTSSSYFS 636
           FEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSSTSSSYFS
Sbjct: 541 FEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSSTSSSYFS 592

BLAST of CmoCh17G004880.1 vs. ExPASy TrEMBL
Match: A0A6J1KUS4 (uncharacterized protein LOC111498900 OS=Cucurbita maxima OX=3661 GN=LOC111498900 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 7.8e-304
Identity = 560/596 (93.96%), Postives = 569/596 (95.47%), Query Frame = 0

Query: 44  MASSASSPFTKLHFPHSPLPQPPA----NSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVD 103
           MASSASSPFTKLHFPHSPLPQPPA    NSCAQFLCKS+FFCFFLLLLPLFPSEAPDFVD
Sbjct: 1   MASSASSPFTKLHFPHSPLPQPPATHHSNSCAQFLCKSLFFCFFLLLLPLFPSEAPDFVD 60

Query: 104 QTLFTKFWELFHLMFVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFD 163
           QTLFTKFWELFHLM VGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFD
Sbjct: 61  QTLFTKFWELFHLMLVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFD 120

Query: 164 DVDDFGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTDNV 223
           DVDDF VSDERK+SEVLYIQP LGSASDLNAQSR QEKLRYS+PKKRYENSYEFADTDNV
Sbjct: 121 DVDDFSVSDERKLSEVLYIQPNLGSASDLNAQSRQQEKLRYSIPKKRYENSYEFADTDNV 180

Query: 224 AHACKSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLRSSLTESDDVEFDCGDESC 283
           AHACKSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSL+SSLTESDDVEFDCGDESC
Sbjct: 181 AHACKSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLKSSLTESDDVEFDCGDESC 240

Query: 284 LSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFG 343
           LSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFG
Sbjct: 241 LSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKKVIRERGFG 300

Query: 344 NAVLRPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKPRKMSSLSN 403
           NAVLRPSHFRPPSIDETQFESLKKSGSLHS LSQSSQTSSLSS LSSTTRK  KMSSLSN
Sbjct: 301 NAVLRPSHFRPPSIDETQFESLKKSGSLHSNLSQSSQTSSLSSSLSSTTRKHHKMSSLSN 360

Query: 404 ISYKSLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFASIPKALSQ 463
           ISYKSLHSRQYS SSLSENSRGSSEDPLIEQENSSECNESVVSSPRSD NF SIPKALSQ
Sbjct: 361 ISYKSLHSRQYSMSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDMNFRSIPKALSQ 420

Query: 464 GKSVRRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGTGQGWPDVV 523
           GKS+RRI+ANAAAIED+KAQEMHRKQVKHDDIIGNKFEEGG S PY+REDGTG GWPDV 
Sbjct: 421 GKSIRRIQANAAAIEDIKAQEMHRKQVKHDDIIGNKFEEGGTS-PYIREDGTGHGWPDVA 480

Query: 524 NPNAGNMNRFPKTTFLGIKEQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDS 583
           NPNA NM+RFP TTFLGIKEQKEETESLVADDSKDDSEGEDES FASSDEEA SSMAGDS
Sbjct: 481 NPNASNMSRFPTTTFLGIKEQKEETESLVADDSKDDSEGEDESFFASSDEEAASSMAGDS 540

Query: 584 ESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSSTSSSYFS 636
           ESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLR    GGGGWGSFSSTSSSYFS
Sbjct: 541 ESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLR----GGGGWGSFSSTSSSYFS 591

BLAST of CmoCh17G004880.1 vs. ExPASy TrEMBL
Match: A0A5D3DMA5 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002840 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 3.7e-245
Identity = 475/607 (78.25%), Postives = 514/607 (84.68%), Query Frame = 0

Query: 44  MASSASSPFTKLHFPHSPLPQPP----ANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVD 103
           MASS S+PFTK HFPHSPLP       +NSC  FLCKS+FFC FLLLLPLFPSEAP+FV+
Sbjct: 1   MASSPSTPFTKPHFPHSPLPPTSTTRHSNSCTHFLCKSLFFCIFLLLLPLFPSEAPEFVN 60

Query: 104 QTLFTKFWELFHLMFVGIAVSYGLFSTRNNQMNV--DEPRYSSFENPQSYLSKMLYVASI 163
           QTL TKFWELFHLMFVGIAVSYGLFS RN Q++V  DEPR+S+FENPQSYLSKML+VASI
Sbjct: 61  QTLLTKFWELFHLMFVGIAVSYGLFSRRNVQVSVDSDEPRFSNFENPQSYLSKMLHVASI 120

Query: 164 FDDVDDFGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTD 223
           F+DVDDF VSDERK+SEVLYIQP LGS    NA SR QE   YS+PKKRYENS EF DT+
Sbjct: 121 FEDVDDFSVSDERKLSEVLYIQPNLGSVRGFNAISRQQENFHYSIPKKRYENSLEFDDTN 180

Query: 224 NVAHACKSRYTRGGSVVVVPETNRSS------SGGIVNYKPLGLPVRSLRSSLTESDDVE 283
           +V HACKSRYTRGGSVVVV ETNRS+      SG IVNYKPLGLPVRSLRS+LTE DDVE
Sbjct: 181 SVGHACKSRYTRGGSVVVVAETNRSNSGEWLESGAIVNYKPLGLPVRSLRSNLTEPDDVE 240

Query: 284 FDCGDESCLSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKK 343
           FDCGDESCLSSKSS K+SE+NCE  SEFGDNCCVNLEEKFDET IA MS FQLRE FGK 
Sbjct: 241 FDCGDESCLSSKSSSKNSESNCERTSEFGDNCCVNLEEKFDETVIAKMSPFQLRENFGKN 300

Query: 344 VIRERGFGNAVLRPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKP 403
           ++RERG  NAVLRPSHFRP SIDETQFESLKKS SLHS LSQSSQTSSLS  LSSTTRK 
Sbjct: 301 MMRERGVKNAVLRPSHFRPSSIDETQFESLKKSRSLHSNLSQSSQTSSLSPSLSSTTRKH 360

Query: 404 RKMSSLSNISYKSLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFA 463
           RKMSSL NISYKS HSRQYS SSLSENSRGSSEDPLIE ENSSECNES++SSPR DRNFA
Sbjct: 361 RKMSSLGNISYKSSHSRQYSLSSLSENSRGSSEDPLIEPENSSECNESIISSPRLDRNFA 420

Query: 464 SIPKALSQGKSVRRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGT 523
            IPKALS+GKSVR IRAN +AIE+MKAQEM+R QV+HDD +GNKF EGGMS PYMREDGT
Sbjct: 421 HIPKALSRGKSVRTIRANTSAIEEMKAQEMYRNQVEHDDNVGNKF-EGGMS-PYMREDGT 480

Query: 524 GQGWPDVVNPNAGNMNRFPK-TTFLGIKEQKEETESLVADD--SKDDSEGEDESLFASSD 583
           G GWP + +PNAG  NR PK TTF GI+EQKE+ ES + DD   +D+SE ED S F SSD
Sbjct: 481 GHGWPGINSPNAGYSNRHPKTTTFSGIEEQKEDIESQLTDDDGKEDNSEREDVSFFESSD 540

Query: 584 EEAGSSMAGDSESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSS 636
           EEA SSMAG+SESGA+EVDKKAGEFIAKFREQIQLQRMASV+KRLR      GGWGSFSS
Sbjct: 541 EEAASSMAGESESGAYEVDKKAGEFIAKFREQIQLQRMASVDKRLR------GGWGSFSS 599

BLAST of CmoCh17G004880.1 vs. ExPASy TrEMBL
Match: E5GCN2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 3.7e-245
Identity = 475/607 (78.25%), Postives = 514/607 (84.68%), Query Frame = 0

Query: 44  MASSASSPFTKLHFPHSPLPQPP----ANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVD 103
           MASS S+PFTK HFPHSPLP       +NSC  FLCKS+FFC FLLLLPLFPSEAP+FV+
Sbjct: 1   MASSPSTPFTKPHFPHSPLPPTSTTRHSNSCTHFLCKSLFFCIFLLLLPLFPSEAPEFVN 60

Query: 104 QTLFTKFWELFHLMFVGIAVSYGLFSTRNNQMNV--DEPRYSSFENPQSYLSKMLYVASI 163
           QTL TKFWELFHLMFVGIAVSYGLFS RN Q++V  DEPR+S+FENPQSYLSKML+VASI
Sbjct: 61  QTLLTKFWELFHLMFVGIAVSYGLFSRRNVQVSVDSDEPRFSNFENPQSYLSKMLHVASI 120

Query: 164 FDDVDDFGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTD 223
           F+DVDDF VSDERK+SEVLYIQP LGS    NA SR QE   YS+PKKRYENS EF DT+
Sbjct: 121 FEDVDDFSVSDERKLSEVLYIQPNLGSVRGFNAISRQQENFHYSIPKKRYENSLEFDDTN 180

Query: 224 NVAHACKSRYTRGGSVVVVPETNRSS------SGGIVNYKPLGLPVRSLRSSLTESDDVE 283
           +V HACKSRYTRGGSVVVV ETNRS+      SG IVNYKPLGLPVRSLRS+LTE DDVE
Sbjct: 181 SVGHACKSRYTRGGSVVVVAETNRSNSGEWLESGAIVNYKPLGLPVRSLRSNLTEPDDVE 240

Query: 284 FDCGDESCLSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKK 343
           FDCGDESCLSSKSS K+SE+NCE  SEFGDNCCVNLEEKFDET IA MS FQLRE FGK 
Sbjct: 241 FDCGDESCLSSKSSSKNSESNCERTSEFGDNCCVNLEEKFDETVIAKMSPFQLRENFGKN 300

Query: 344 VIRERGFGNAVLRPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKP 403
           ++RERG  NAVLRPSHFRP SIDETQFESLKKS SLHS LSQSSQTSSLS  LSSTTRK 
Sbjct: 301 MMRERGVKNAVLRPSHFRPSSIDETQFESLKKSRSLHSNLSQSSQTSSLSPSLSSTTRKH 360

Query: 404 RKMSSLSNISYKSLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFA 463
           RKMSSL NISYKS HSRQYS SSLSENSRGSSEDPLIE ENSSECNES++SSPR DRNFA
Sbjct: 361 RKMSSLGNISYKSSHSRQYSLSSLSENSRGSSEDPLIEPENSSECNESIISSPRLDRNFA 420

Query: 464 SIPKALSQGKSVRRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGT 523
            IPKALS+GKSVR IRAN +AIE+MKAQEM+R QV+HDD +GNKF EGGMS PYMREDGT
Sbjct: 421 HIPKALSRGKSVRTIRANTSAIEEMKAQEMYRNQVEHDDNVGNKF-EGGMS-PYMREDGT 480

Query: 524 GQGWPDVVNPNAGNMNRFPK-TTFLGIKEQKEETESLVADD--SKDDSEGEDESLFASSD 583
           G GWP + +PNAG  NR PK TTF GI+EQKE+ ES + DD   +D+SE ED S F SSD
Sbjct: 481 GHGWPGINSPNAGYSNRHPKTTTFSGIEEQKEDIESQLTDDDGKEDNSEREDVSFFESSD 540

Query: 584 EEAGSSMAGDSESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSS 636
           EEA SSMAG+SESGA+EVDKKAGEFIAKFREQIQLQRMASV+KRLR      GGWGSFSS
Sbjct: 541 EEAASSMAGESESGAYEVDKKAGEFIAKFREQIQLQRMASVDKRLR------GGWGSFSS 599

BLAST of CmoCh17G004880.1 vs. ExPASy TrEMBL
Match: A0A0A0K9X1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103540 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 3.4e-243
Identity = 471/608 (77.47%), Postives = 511/608 (84.05%), Query Frame = 0

Query: 44  MASSASSPFTKLHFPHSPLPQPP----ANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVD 103
           MA S S+PFTK HFPHSPLP       +NSC QF+CKS+FFC FLLLLPLFPSEAP+FV+
Sbjct: 1   MAPSPSTPFTKPHFPHSPLPPTSTTRHSNSCTQFICKSLFFCIFLLLLPLFPSEAPEFVN 60

Query: 104 QTLFTKFWELFHLMFVGIAVSYGLFSTRNNQMNV--DEPRYSSFENPQSYLSKMLYVASI 163
           QT  TKFWELFHLMF+GIAVSYGLFS RN Q++V  DEPR+S+FENPQSYLSKM +VASI
Sbjct: 61  QTFLTKFWELFHLMFIGIAVSYGLFSRRNVQVSVDSDEPRFSNFENPQSYLSKMFHVASI 120

Query: 164 FDDVDDFGVSDERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTD 223
           F+DVDDF VSDERK+SEVLYIQP LGS S LNA SR QE   YS+PKKRYENS EFA+TD
Sbjct: 121 FEDVDDFSVSDERKLSEVLYIQPNLGSVSGLNAISRQQENFHYSIPKKRYENSLEFAETD 180

Query: 224 NVAHACKSRYTRGGSVVVVPETNRSS------SGGIVNYKPLGLPVRSLRSSLTESDDVE 283
           NV HACKSRYTRGGSVVVV ETNRS+      SG IVNYKPLGLPVRSL+SSLTE DDVE
Sbjct: 181 NVGHACKSRYTRGGSVVVVAETNRSNSGEWLESGAIVNYKPLGLPVRSLKSSLTEPDDVE 240

Query: 284 FDCGDESCLSSKSSPKSSENNCEGNSEFGDNCCVNLEEKFDETAIASMSSFQLREKFGKK 343
           FDCGDESCLSSKSS K+SE+NCE  SEFGDNCCVNLEEKFDET IASMS FQLREKF K 
Sbjct: 241 FDCGDESCLSSKSSSKNSESNCERTSEFGDNCCVNLEEKFDETVIASMSPFQLREKFEKN 300

Query: 344 VIRERGFGNAVLRPSHFRPPSIDETQFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKP 403
           ++RER   NAVLRPSHFRP SIDETQFESLKKS SLHS LSQSSQTSSLSSPLSS TRK 
Sbjct: 301 MMRERRVKNAVLRPSHFRPSSIDETQFESLKKSTSLHSNLSQSSQTSSLSSPLSSRTRKH 360

Query: 404 RKMSSLSNISYKSLHSRQYSTSSLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFA 463
           RKMSSL NISYKS HSRQYS SSLSENSRGSSEDPLI+ ENSSECNESVVSSPR DRNFA
Sbjct: 361 RKMSSLGNISYKSSHSRQYSLSSLSENSRGSSEDPLIDPENSSECNESVVSSPRLDRNFA 420

Query: 464 SIPKALSQGKSVRRIRANAAAIEDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGT 523
           + PKALS+GKSVR +RA+ +AIE+MKAQEM+R QV+HDD + NKF EGGMS PYMRED T
Sbjct: 421 NTPKALSRGKSVRTVRASTSAIEEMKAQEMYRNQVEHDDNVENKF-EGGMS-PYMREDET 480

Query: 524 GQGWPDVVNPNAGNMNRFPK----TTFLGIKEQKEETESLVADDSKDDSEGEDESLFASS 583
           G GWP + N NA   NR+ K    TTF GI+EQKE+TES V DD KD+SE ED+S F SS
Sbjct: 481 GHGWPGINNLNAAYSNRYSKTTATTTFSGIEEQKEDTESQVTDDGKDNSEREDDSFFESS 540

Query: 584 DEEAGSSMAGDSESGAFEVDKKAGEFIAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFS 636
           DEEA  SM GDSESGA EVDKKAGEFIAKFREQIQLQRMASV+KRLR      GGWGSFS
Sbjct: 541 DEEAALSMTGDSESGAHEVDKKAGEFIAKFREQIQLQRMASVDKRLR------GGWGSFS 600

BLAST of CmoCh17G004880.1 vs. TAIR 10
Match: AT3G60380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink). )

HSP 1 Score: 139.4 bits (350), Expect = 9.8e-33
Identity = 139/392 (35.46%), Postives = 188/392 (47.96%), Query Frame = 0

Query: 47  SASSPFTKLHFPHSPL--PQPPANSC--AQFLCKSIFFCFFLLLLPLFPSEAPDFVDQTL 106
           ++ +P+TK   P + +  PQP   S     F CKS+ F  FLL LPLFPS+APDFV +T+
Sbjct: 2   ASPNPYTKRRSPPNVVVPPQPRYKSIGGGGFFCKSVLFALFLLALPLFPSQAPDFVGETV 61

Query: 107 FTKFWELFHLMFVGIAVSYGLFSTRNNQMNVDEPRYSSFENPQSYLSKMLYVASIFD-DV 166
            TKFWEL HL+FVGIAV+YGLFS RN +  VD       E+  SY+S++  V+S+FD + 
Sbjct: 62  LTKFWELIHLLFVGIAVAYGLFSRRNVESAVDLRMTRVDESSLSYVSRIFQVSSVFDEEF 121

Query: 167 DDFGVS--DERKVSEVLYIQPKLGSASDLNAQSRHQEKLRYSMPKKRYENSYEFADTDNV 226
           DD      D R    V      +G +     +S               E S EF +T+ V
Sbjct: 122 DDNSCEFVDVRSDESVSARASVVGKSESFVVES------------GELEESSEFGETNEV 181

Query: 227 AHACKSRYTRGGSVVVVPETNRSSSGGIVNYKPLGLPVRSLRSSLTESDDVEFDCGDESC 286
             A  S+Y +G S VVV        G +V ++PLGLP+R LRSSL           D + 
Sbjct: 182 -RAWNSQYFQGKSKVVVARPAYGLDGHVV-HQPLGLPIRRLRSSLR----------DNAA 241

Query: 287 LSSKSSPKSSEN--NCEGNSEFGDNCCVNLEEKFDE--TAIASMSSFQLREKFGKKVIRE 346
           L  KS   S +   N E  S   DN        FDE   A AS   +Q R +        
Sbjct: 242 LQDKSFADSCDGAVNAEAESLLADNF-------FDEVLAAPASPVPWQARPEM------- 301

Query: 347 RGFGNAVLRPSHFRPPSIDET-QFESLKKSGSLHSYLSQSSQTSSLSSPLSSTTRKPRKM 406
            G G+    PS+F+P S+DET +  S + +GS  S  S +SQ  +  SP  S + +    
Sbjct: 302 MGIGDNY--PSNFQPISVDETLKSISSRSTGSSSSQTSYASQNQNRFSPSRSVSAESLNS 353

Query: 407 SSLSNISYKSLHSRQYSTSSLSENSRGSSEDP 427
           +    +  KS  S   S+S     S   S  P
Sbjct: 362 NVEELVKEKSRQSSSRSSSPSLPPSPSLSPSP 353


HSP 2 Score: 42.0 bits (97), Expect = 2.1e-03
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0

Query: 541 KEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSESGAFEVDKKAGEFIAKFREQ 600
           K E E +  ++ +  +E + E  F   +E A  S +  S     EVD+KAGEFIAKFREQ
Sbjct: 661 KSEPEEVAMEEPQ--AEQQPEVTFEEEEEAAWESQSNASHDHN-EVDRKAGEFIAKFREQ 720

Query: 601 IQLQRMASVEKRLRGGGGG 620
           I+LQ++ S E+  RGGG G
Sbjct: 721 IRLQKLISGEQP-RGGGTG 735

BLAST of CmoCh17G004880.1 vs. TAIR 10
Match: AT4G16790.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 63.2 bits (152), Expect = 8.9e-10
Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 0

Query: 64  QPPANSCAQFLCKSIFFCFFLLLLPLFPSEAPDFVDQTLFTKFWELFHLMFVGIAVSYGL 123
           Q P    ++F+ K++       ++P+F S+ P+  +Q   T+  EL HL+FVGIAVSYGL
Sbjct: 19  QNPRKFYSRFIFKALILTVLCAVVPVFLSQTPELANQ---TRLLELLHLVFVGIAVSYGL 78

Query: 124 FSTRN-------NQMNVDEPRYS-SFENPQSYLSKMLYVASIFD-------DVDDFGVSD 172
           FS RN          N D  +   S  N  SY+ K+L V+S+F+       +  D    D
Sbjct: 79  FSRRNYDGGGGGGTSNSDHNKADHSNNNSHSYVPKILEVSSVFNVGHESESEPSDDSSGD 138


HSP 2 Score: 34.7 bits (78), Expect = 3.4e-01
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 0

Query: 539 EQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSE-SGAFEVDKKAGEFIAKF 598
           +Q+    S   ++S++  +   E+      E+      G SE +   +VDKKA EFIAKF
Sbjct: 389 DQRSNLGSKAVEESENGEQRRGENEIHDEVEKKIVEEEGVSEINNGSDVDKKADEFIAKF 448

Query: 599 REQIQLQRMASVEK 612
           REQI+LQR+ S+++
Sbjct: 449 REQIRLQRIESIKR 462

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H4M00.0e+00100.00uncharacterized protein LOC111459998 OS=Cucurbita moschata OX=3662 GN=LOC1114599... [more]
A0A6J1KUS47.8e-30493.96uncharacterized protein LOC111498900 OS=Cucurbita maxima OX=3661 GN=LOC111498900... [more]
A0A5D3DMA53.7e-24578.25DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
E5GCN23.7e-24578.25Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A0A0K9X13.4e-24377.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103540 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G60380.19.8e-3335.46FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT4G16790.18.9e-1034.96hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 585..611
e-value: 2.7E-9
score: 36.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..462
NoneNo IPR availablePANTHERPTHR34059:SF6COTTON FIBER PROTEINcoord: 388..613
NoneNo IPR availablePANTHERPTHR34059:SF6COTTON FIBER PROTEINcoord: 47..399
NoneNo IPR availablePANTHERPTHR34059EXPRESSED PROTEINcoord: 47..399
coord: 388..613

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh17G004880CmoCh17G004880gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh17G004880.1:exon:4466CmoCh17G004880.1:exon:4466exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh17G004880.1:cdsCmoCh17G004880.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh17G004880.1CmoCh17G004880.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane