CmoCh14G002950.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCGTGGCACATCACCTGGTGCTTGACTCTGATACCATTTATAACAGTTCAAGCCTACCACTACCAGATATTGTTCTCATCTTCAGGCTTTCATTATGGGTTTACTCTTAAGGTTTTGAACCAATGGAATGGATTTTATGATTAGTCAAGCTGATGAAAGCCATTTTAAGCTAGTAAAAGTAAGAGAAATTCAAATTGACGTATTTGATCTTGAACTTTTGACATTTTAATCTGTAATATATCTTAACTAGTTGAGTTATACTCAGATTCATCAATTTAAATGAGTTATTGTTTTATGTAAGTGCGCTAAGAATAGCTCGCATAATAATAAATAAAAAAATATATAAAATAAGGTTTTTTAATTTATATTAAATAAAGTATTAAAGTGGTTTAGGGTATCCCTACCCATTGAAGGAATGAAAGTGACATTCGGAAGCTTAGTATATAAAATAATGGGAATGATTTTCTTTTTTTAGTACGAGACCCACATAATAATATTTATTATTTATTACTTCATTAAAATTAGCAACCAATAAAAATTGAAAATTAAAGAAAATTATTCTATTCCCTTCATATTTAGTGTTAGTATAATAATAGTTAATATATCTATTTTAATTTCTACTAAGTAATAACCTATTTTGAATGTTTAATAAATAAATAATAATAATAAAAATACAAGGTTAATTTTAAAATTTTGGTAAAATTAAAATGTTTGGAAAGAAATTAGGAATGGAAATAAAGAACGACACGTGACCAAATAAATGCAAACTATGCTGATTCTTCTAATATATTTATTCGTTCAATAAAGTGAAAAAAGACTCGACCATTCGAGAACAAATATGGAAGGTTGTTCCACCTTTCAACTCGGTTCATAAATATTTTAGAAAAATATTATATCTCGACACTTGTTTAGCATAGTCTGACGAGTTCGAACCACTTTTTTTGGCATCATCCCACTTACTAGTTAAAATTACATTTTGACTCTCAAAATTTATACATATATATTAAATTTCATGATTAAAATACGTGGATGGGAGATAATATGAATATGAAAATTAATATAAACATATAACTTAATTTTTCTAAAAAATATAATTTAAAAAATATTTATCAATATGTTTACAAAATTAAAAATTTTGTATTGATATTCATATTTTAATTTCGAACGAATAATTTCTATTATCTCAATATCAAAAAAATTATCAAATAGTGCCACGTGTTTATTGAACAACGTGCGTGACACGTTGAAATTCAGTTGGAGCTCGTTAAAGTTAAGTAGTCCGAGTCTATTGAAAAAGATTTTGTTAAAGCCCAAACCCAAAAGTTGGGCCCAAAGTCAAAAGTTGGGCCCATGTCTATTGAAAATATTTGGTTAATTCATGTTGAAAGCTATTTAGATGTTCTCCCCTCTCGTTTAGGCTTTTTATTAGATCCCATATCGATCGGAGAAAATAAAAGTGTCAGCGAGGATGGTAGTCTCAAAGAAAGTAGATTGTGAGATATTACATCGGTCGGAGAGAAGAACGTGCATTATATATAAGGGTGTAGAAACTTCTCTCTAGCAGGCGGGTTTTAAAATTTTTGAAGAGAAATTAAGGAAAGCCTAAAGAATACAATATTAGTGGAAGCTTGAGCTAATATATTAAGTTAATAATTTAATTTAGGAATGTTCATGTGACTCATCCATTTGGATTATTAAACTCAAACCATAAAAGTTGGGTTGTGTTAGATTTTTTTTTTTTTGTCGGTTTGGATTTGGTTGAATTTTTAAAAAACAAACCATTCATGTCTGTCTGTAAGTTACATCTTTTTTTGTTGGATCAACATGATCAATCTAAAAAATAGGGTTACAACCCAACCTAACACTATCATGTCTTTAAGATTATTAGGAAAATTAAGAATATTTCAACTTTGTAATTGAGATTATTGATGCTTTTGTCCCGTGAATATTTGATATTTGAAGTTTATGAGATTTTAGTTATTAATGTAACATGTATTTTAGATAAGTAAGATTTATTTTTTTATATAATTAAAAAACAAAAAAACAACTCAACAACTTAACCTAACCAAACCTGAATGTAAATGGTTGGATTGAGTTGTGAACTCTGTTCGGGTTGCTTGGATCACCAACCCAACTAACTCAAAGTTTTAGGTAGAAATGAGTTAGGTTGTGAACTCTATTCGGGTACATCTTGAATTTAATCTATAAATTTCGACGTATAATTTAATTTTTAAATAAGTTGAATCTTAAAAAATATATGTCCAATACCAATTAGCGCATTAAAAGAAATATTTTATGAACTACAAAAAAGTAATAATTAAATTAAATATTTTCCAGATCAGATTGTGTAAGAAATAGAAATTAACCAATTACACAGCCTTTCTGTTTTTGACAAATAACCCAAAAACCGCCTTTAGTTGTTCTTGAGCTTCTCTGTTTTTTCCCACGCCCTCGCTTTACTTTCAGATCTATTCCTTCCCTTGTTCCCTGCGAAATTCAGGGCGAGGTCTGATCTGTGGGTAGCCGAGGGCTGTAATGGCGGGGGGCGTGAACCGGAAGATATCGGCAGCATCGGCCAGAGCTCATACGAGGAAAACTAAACGGAGCAGTTCTTCCCCGATTTCTTCAGGTGGCCTATCTCCATTTCTTTTTCTATTTTTCTCCACTGCTTGTGTGAATTTTTTGGTGCTTATTGTATTCGAATATGCTGAAATTCGCATGTTAATCATCTACGTTGTTTCCTTTTTCGTTGCGAAGTTGGAAGGAAGGAAGAATCGTAGTTCTCCGTCTGGTTTTTATGCGTTTGAGTAAGCTGTAGCGATGACCAAAATCGACCTAAGCTGTAGTTTAGGGTGCTATTTTCAATTTCTGACCTCAGCTTTAGAACACTCCGGCATGATTTTTCATCAAATTTGAGTTGATTCTATTTAGTTGAAGTAAATATTAGAACAACCAGGAACCAATCTAACCTACGAGTTGAAGTTGTTTGACCCTAAACTGCCCATTCAAGCCCATAATTTTTGGTTTAGGTTGATCAGGTGTTAATGAATTTCTTTAACATCACCAGCCTCTCTTTCCTAGATCTGTTACTGTTTACAACTTAACACTCATCTTGTGATCTATCAGTGCAATCTTATGTGAGTGGATATGGTTCATTTCTTTTACATACTATAGATGTTCTCCATGCTATATGAGCATTTTGTATCTTCTCATCGTATACATTGAAAAGTTATATCTTGTTAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAAGATCTTCTCCATGTTATAGAACAAATAATATGATTTTTCTCTAATTCTTTTTCTATTTTTCAATTTCATTGTACCTTTCCCCCTATTTTATGCATTTTAAAACAAAAAGAATGATATTGGTTCTCCCTTGATGTATGTATCTACTAGCTTTTCTGATTATAACTCAAAATAACAGGATTGGTAAGGAATATAGCAGTGCTGCTCTTTTTTGGGTTTTTAGCCTGGGGTTATCAGGCAATCCGGCCTCCTGCACCAAAAATATGTGGCTCCCCCGATGGCCCTCCCATCACAGCACCAAGAATAAAGCTTAGAGATGGTAGGTATTTGGCATATAAGGAGCATGGGGTTCCAAAAGATTCAGCTAAATACAAAATTATCTTTGTCCATGGCTTCCGTTCTTGCAGACACGATGCCGGTGTTGCAAATACCATCTCTCCGGTATCATTTATACCTCACCTTCTAATGTTTATCCATTTGCTCTGGAAAGACATCTAAACACTCAAATGAGACCAGTCTAAAGGTGAATCTCTACTGAAATCTTTGCAGGACGTAATTGAAAATTTAGGAATCTACATTGTATCATTTGACAGATCTGGTTATGGAGAAAGCGATCCAAATCCAAATCGAACTCCAAAAAGCACTGCTTATGATATCGAGGAGCTAGCTGATCAATTGGGGCTAGGATCCAAATTCTATGTTATTGGATTTTCCATGGGTGGCCAGGTAGTTTGGAGCTGTCTAAAATATATTCCTAACAGGTATGAAGCCACACCTGAAAACAAATGTCAAGAATTCTTTCCTACAAGAAAACGAGAATGAACTTCAGGAAGAAATTAAAATTGAATATTCCATTGCCTCATTTTTATGTAAAAGAATATGGAGAACAAGGAAAGTGATTTATCTATTTGTGTTTGATAAGGACTTAATTTTTTTAAATATTAACAGGCTAGCAGGGGCAGCGCTATTGGCACCAGCTATTAACTACTGGTGGTCTGGGCTCCCTGCAAACTTAACGAATGAAGCCTTCTACCAACAGTCTGAACAGGATCAGTGGGCAGTTCGTGTGGCTCACTACACCCCCTGGCTTACCTATTGGTGGAATACACAAAGATTGTTTCCTTCTTCTAGTATTATTGCAGCTAGTTCCAGGAATCTATCTCATCAAGACAAAGAACTCGAGTCCAAGCTAGTGGGAAGGAAAGAATGTCAGGTATGTGACCTTTCTTCATGAAATTTTGCTTGCTACTTTTCTGATCATATCTTTTAATGCTGACTGTATGATAGAAATGGTGCTAAATGTGACTGTCAAATTAAAGGTTTCATTCCAGTAAGTGATTTATTGGCCAAATTTGTTAGGCTAGATGAGAGTAAACATGGAAAAACCAACAGCATACCCTCAAGTGCTGGTTTGGTTTAAGTCAGAAATCTGCCATAAACAATATTGAATTAGCAAAGGAGAGAAATTGTAGTTACCGTTGTGCAAGGAGTGTGGATAAGGGTAGGTAAGAATAGTACCTGTCTCTTGTATAAACTGTTAAAAGGTTGTGGACCAATTGTAATATATGGTAGGGGTGGGTAATGTATTAACTAAGAGGTTTGGTAGCTTGTGGAGAGTATGAAGCCTTTTCCAAGCATTTGGGAGCGTGTATTTGTTTTTGGTGTTAGTAATCACGATCCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTTTCTTGGTTTTGCTTTGGGCTTCCCCAAACGGCCTCGTACCAATGGACATGTATTCCTTACTTATAAACCTATGATCATTCTCTAAATTAGCCAACGTAGGACTCCCTCCCAACAATACTCAGAAGTGAAAATACATTACTTTGAGAGCTGTGGGTGACTTATTTAACATTAATCAAGTAAAGGAGAAACCAAGCTAGTAGTTATGATCGGGGAGGAAATAGCTGAACTTTGAAAAACAAATGGTGACATTATAATCAGCTGTTTTCTTAGAAAACACACTGATAAATATTTGTTTTCTGTTGATGGGATGAAATCTTTCAGCCTATATTTAGCCAACAAGGAGAACACGAGTCCATCCACAGGGACGCGAACGTTGGATTTGGGAAGTGGGAATTCAGTCCCCTGGATCTGGAAAACCCATTCCCAGGGAATGAAGGTTCAGTTCATTTATGGCAGGGAGATGAAGACAAGATCGTGCCTTTCGCCCTCCAACGTCACATTGCCAAACAGCTTCCATGGATTCATTATCACGAGGTAGCAGGTGCTGGGCATAGATTTCCCAATGCTGATGGCATGTCTGAATCCATCATCAAAGCCCTTCTTCTCAACGAGAAATAGGCTTTTATTTATTACATCTTCTTCTGGGTTGGGTTGGTGGTCCTTCAGTACTCCATTTTTTTTTTGTCTCTCTCGCCCTTGGTACATTATATTTATAGCGGTCCTCATTTGGCTGTATTGAGCTCTACTTTTGCTTGGAGGACAATGGATACTTTTACCATGCTCTCTCTTATTGATCTTTGAAATTAAGGGTTGAAAGTGTCATTCCATCCTTTTGTTATCCATTCAGTGTCCCGAGTGAAATTACATGAACCCGATAATATTTGATTATATACTAAATGTCACAATCGTGTTTTTACAGGACG ATGTCCTCGTGGCACATCACCTGGTGCTTGACTCTGATACCATTTATAACAGTTCAAGCCTACCACTACCAGATATTGTTCTCATCTTCAGGCTTTCATTATGGGTTTACTCTTAAGCCGAGGGCTGTAATGGCGGGGGGCGTGAACCGGAAGATATCGGCAGCATCGGCCAGAGCTCATACGAGGAAAACTAAACGGAGCAGTTCTTCCCCGATTTCTTCAGGATTGGTAAGGAATATAGCAGTGCTGCTCTTTTTTGGGTTTTTAGCCTGGGGTTATCAGGCAATCCGGCCTCCTGCACCAAAAATATGTGGCTCCCCCGATGGCCCTCCCATCACAGCACCAAGAATAAAGCTTAGAGATGGTAGGTATTTGGCATATAAGGAGCATGGGGTTCCAAAAGATTCAGCTAAATACAAAATTATCTTTGTCCATGGCTTCCGTTCTTGCAGACACGATGCCGGTGTTGCAAATACCATCTCTCCGGACGTAATTGAAAATTTAGGAATCTACATTGTATCATTTGACAGATCTGGTTATGGAGAAAGCGATCCAAATCCAAATCGAACTCCAAAAAGCACTGCTTATGATATCGAGGAGCTAGCTGATCAATTGGGGCTAGGATCCAAATTCTATGTTATTGGATTTTCCATGGGTGGCCAGGTAGTTTGGAGCTGTCTAAAATATATTCCTAACAGGCTAGCAGGGGCAGCGCTATTGGCACCAGCTATTAACTACTGGTGGTCTGGGCTCCCTGCAAACTTAACGAATGAAGCCTTCTACCAACAGTCTGAACAGGATCAGTGGGCAGTTCGTGTGGCTCACTACACCCCCTGGCTTACCTATTGGTGGAATACACAAAGATTGTTTCCTTCTTCTAGTATTATTGCAGCTAGTTCCAGGAATCTATCTCATCAAGACAAAGAACTCGAGTCCAAGCTAGTGGGAAGGAAAGAATGTCAGCCTATATTTAGCCAACAAGGAGAACACGAGTCCATCCACAGGGACGCGAACGTTGGATTTGGGAAGTGGGAATTCAGTCCCCTGGATCTGGAAAACCCATTCCCAGGGAATGAAGGTTCAGTTCATTTATGGCAGGGAGATGAAGACAAGATCGTGCCTTTCGCCCTCCAACGTCACATTGCCAAACAGCTTCCATGGATTCATTATCACGAGGTAGCAGGTGCTGGGCATAGATTTCCCAATGCTGATGGCATGTCTGAATCCATCATCAAAGCCCTTCTTCTCAACGAGAAATAGGCTTTTATTTATTACATCTTCTTCTGGGTTGGGTTGGTGGTCCTTCAGTACTCCATTTTTTTTTTGTCTCTCTCGCCCTTGGTACATTATATTTATAGCGGTCCTCATTTGGCTGTATTGAGCTCTACTTTTGCTTGGAGGACAATGGATACTTTTACCATGCTCTCTCTTATTGATCTTTGAAATTAAGGGTTGAAAGTGTCATTCCATCCTTTTGTTATCCATTCAGTGTCCCGAGTGAAATTACATGAACCCGATAATATTTGATTATATACTAAATGTCACAATCGTGTTTTTACAGGACG ATGTCCTCGTGGCACATCACCTGGTGCTTGACTCTGATACCATTTATAACAGTTCAAGCCTACCACTACCAGATATTGTTCTCATCTTCAGGCTTTCATTATGGGTTTACTCTTAAGCCGAGGGCTGTAATGGCGGGGGGCGTGAACCGGAAGATATCGGCAGCATCGGCCAGAGCTCATACGAGGAAAACTAAACGGAGCAGTTCTTCCCCGATTTCTTCAGGATTGGTAAGGAATATAGCAGTGCTGCTCTTTTTTGGGTTTTTAGCCTGGGGTTATCAGGCAATCCGGCCTCCTGCACCAAAAATATGTGGCTCCCCCGATGGCCCTCCCATCACAGCACCAAGAATAAAGCTTAGAGATGGTAGGTATTTGGCATATAAGGAGCATGGGGTTCCAAAAGATTCAGCTAAATACAAAATTATCTTTGTCCATGGCTTCCGTTCTTGCAGACACGATGCCGGTGTTGCAAATACCATCTCTCCGGACGTAATTGAAAATTTAGGAATCTACATTGTATCATTTGACAGATCTGGTTATGGAGAAAGCGATCCAAATCCAAATCGAACTCCAAAAAGCACTGCTTATGATATCGAGGAGCTAGCTGATCAATTGGGGCTAGGATCCAAATTCTATGTTATTGGATTTTCCATGGGTGGCCAGGTAGTTTGGAGCTGTCTAAAATATATTCCTAACAGGCTAGCAGGGGCAGCGCTATTGGCACCAGCTATTAACTACTGGTGGTCTGGGCTCCCTGCAAACTTAACGAATGAAGCCTTCTACCAACAGTCTGAACAGGATCAGTGGGCAGTTCGTGTGGCTCACTACACCCCCTGGCTTACCTATTGGTGGAATACACAAAGATTGTTTCCTTCTTCTAGTATTATTGCAGCTAGTTCCAGGAATCTATCTCATCAAGACAAAGAACTCGAGTCCAAGCTAGTGGGAAGGAAAGAATGTCAGCCTATATTTAGCCAACAAGGAGAACACGAGTCCATCCACAGGGACGCGAACGTTGGATTTGGGAAGTGGGAATTCAGTCCCCTGGATCTGGAAAACCCATTCCCAGGGAATGAAGGTTCAGTTCATTTATGGCAGGGAGATGAAGACAAGATCGTGCCTTTCGCCCTCCAACGTCACATTGCCAAACAGCTTCCATGGATTCATTATCACGAGGTAGCAGGTGCTGGGCATAGATTTCCCAATGCTGATGGCATGTCTGAATCCATCATCAAAGCCCTTCTTCTCAACGAGAAATAG MSSWHITWCLTLIPFITVQAYHYQILFSSSGFHYGFTLKPRAVMAGGVNRKISAASARAHTRKTKRSSSSPISSGLVRNIAVLLFFGFLAWGYQAIRPPAPKICGSPDGPPITAPRIKLRDGRYLAYKEHGVPKDSAKYKIIFVHGFRSCRHDAGVANTISPDVIENLGIYIVSFDRSGYGESDPNPNRTPKSTAYDIEELADQLGLGSKFYVIGFSMGGQVVWSCLKYIPNRLAGAALLAPAINYWWSGLPANLTNEAFYQQSEQDQWAVRVAHYTPWLTYWWNTQRLFPSSSIIAASSRNLSHQDKELESKLVGRKECQPIFSQQGEHESIHRDANVGFGKWEFSPLDLENPFPGNEGSVHLWQGDEDKIVPFALQRHIAKQLPWIHYHEVAGAGHRFPNADGMSESIIKALLLNEK Homology
BLAST of CmoCh14G002950.1 vs. ExPASy Swiss-Prot
Match: Q9KWQ6 (4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=hsaD PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 6.2e-04 Identity = 39/151 (25.83%), Postives = 67/151 (44.37%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. ExPASy TrEMBL
Match: A0A6J1FA44 (uncharacterized protein LOC111442192 OS=Cucurbita moschata OX=3662 GN=LOC111442192 PE=4 SV=1) HSP 1 Score: 786.9 bits (2031), Expect = 4.0e-224 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. ExPASy TrEMBL
Match: A0A6J1J625 (uncharacterized protein LOC111481668 OS=Cucurbita maxima OX=3661 GN=LOC111481668 PE=4 SV=1) HSP 1 Score: 763.1 bits (1969), Expect = 6.2e-217 Identity = 365/376 (97.07%), Postives = 367/376 (97.61%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. ExPASy TrEMBL
Match: A0A1S3B7F3 (uncharacterized protein LOC103486604 OS=Cucumis melo OX=3656 GN=LOC103486604 PE=4 SV=1) HSP 1 Score: 691.8 bits (1784), Expect = 1.8e-195 Identity = 322/376 (85.64%), Postives = 345/376 (91.76%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. ExPASy TrEMBL
Match: A0A6J1CU12 (uncharacterized protein LOC111014284 OS=Momordica charantia OX=3673 GN=LOC111014284 PE=4 SV=1) HSP 1 Score: 685.6 bits (1768), Expect = 1.3e-193 Identity = 324/376 (86.17%), Postives = 345/376 (91.76%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. ExPASy TrEMBL
Match: A0A5A7TM03 (Abhydrolase_6 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003820 PE=4 SV=1) HSP 1 Score: 653.7 bits (1685), Expect = 5.3e-184 Identity = 320/455 (70.33%), Postives = 343/455 (75.38%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. TAIR 10
Match: AT2G36290.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 481.5 bits (1238), Expect = 6.9e-136 Identity = 223/359 (62.12%), Postives = 267/359 (74.37%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. TAIR 10
Match: AT3G48410.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 473.8 bits (1218), Expect = 1.4e-133 Identity = 219/369 (59.35%), Postives = 273/369 (73.98%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. TAIR 10
Match: AT1G74300.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 452.6 bits (1163), Expect = 3.5e-127 Identity = 210/338 (62.13%), Postives = 253/338 (74.85%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. TAIR 10
Match: AT1G74280.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 446.8 bits (1148), Expect = 1.9e-125 Identity = 211/363 (58.13%), Postives = 264/363 (72.73%), Query Frame = 0
BLAST of CmoCh14G002950.1 vs. TAIR 10
Match: AT1G74290.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 431.8 bits (1109), Expect = 6.3e-121 Identity = 208/361 (57.62%), Postives = 259/361 (71.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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