CmoCh12G010950.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G010950.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GPI-anchored protein-like protein
Location	Cmo_Chr12: 10019341 .. 10021004 (-)
Sequence length	788
RNA-Seq Expression	CmoCh12G010950.1
Synteny	CmoCh12G010950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACATTGTTGCCCATGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAATGGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAGACACACACACAAACATATATGAGCTTCATAGTTCCTTGTCTTTGATGGTTCTTTCCTGTTGAGCTGTTTTACTGATAATTCCCCATTATCCATAGACATCATTTGTTATGGTTGAGGATTATTGGGAGTGAGTCCCACATTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCGTACCAGTGTGGAGAGTCGTGATTCCTAACATGGTATCAGAGTCATGCCCTAAAACTTAGCTATGTTAATAGAATCCTCAAATATCGAACAAAGAATTGTGAGTCTCGAAGGTGTAGTCAAAAGTGACTAAAAGTGTCGAACAAAGGGTATACTTTGTTCGAGGGTTCCAGAGAAAGGAGTTAAGCCTCGATTAAGGGGAGACTGTTCGAGGGCTCCATAGGCCTTAGGGGAGGCTCTATAGTGTACTTTGTTCGAGTAGAGGATTGTTGGTTAATTTAGGGAATGATCATGGGTTTACGAGTAAGGTTCTCCATTGATATGAAGTCTTTTGGGAAGCCTAAAAGCAAAGCAACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATCGTGGAGAGTCGTGATTCCTAACACATAGCTCCTTGTCTTTGATGGTCTTTGATGGGTTCTTTCCTGTTGAACTGTTTTACTTGTAATTCCCCATTAGCCATAGACATCATTTGCTATATGCTATCTATCTCATAGAAACTCACACCTAAATCATCCATCATTTGCAGTGAAAGAAGACGTGCTTTTCCAAGCCATGAACAGCTATAGAAAGTCCATAAAACTTACCCCCATGAACAAGAACTCCAAAGCAGGCTGCCTAGTCAAGCAAATCGCTTGGGACTTCGACGACCAGTCGCCCCTCAGCATCTTCCTCAGCGGCTCCACCATTGCACCAAGCAACTTCTCCCAACTCCCTAGTCTACCCGACTACCTGTCCAAATGCAAAATCGAGCTCAATCACACAAAAAATGGCCTGATTTTGCCTCTCCATATCCCCACTTTGGCATTGAATCTTGTTCTCCATGAATGTACAAATTCCCAAATGGCTAAGTACTGGAGCAAACCTGAATTCACGTCGGTCGGAATTGGGTGTTTTGAACAATGGGTAGTGTTCGCTTTTGCCACCGATTCGCCTACCGGAAGCTTTTCTTCTGCCGTGAATTTGTCTGATTTGGGTCTTCGACATTTTTACTTGGTGTTATCCGTGCTGTTGGGGTTGCTTCTTCTCTCGGGTTGAGGACCGTTTTCCTTTCCATCTCAAACGACATGTCGGTCGGGTTCTGGAAATTTCAAGCATCCTGCCACAATAATTACATTCTTTTTTTCTTTATTTTGTGTTCGTTTTTACAAGTGTTTTTCATCGAATTGTTATCTTAAATTCTTATCTTAAGGAGGAAAAAAAGAGTTTTTCTAAAGCCG

mRNA sequence

ATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACATTGTTGCCCATGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAATGTGAAAGAAGACGTGCTTTTCCAAGCCATGAACAGCTATAGAAAGTCCATAAAACTTACCCCCATGAACAAGAACTCCAAAGCAGGCTGCCTAGTCAAGCAAATCGCTTGGGACTTCGACGACCAGTCGCCCCTCAGCATCTTCCTCAGCGGCTCCACCATTGCACCAAGCAACTTCTCCCAACTCCCTAGTCTACCCGACTACCTGTCCAAATGCAAAATCGAGCTCAATCACACAAAAAATGGCCTGATTTTGCCTCTCCATATCCCCACTTTGGCATTGAATCTTGTTCTCCATGAATGTACAAATTCCCAAATGGCTAAGTACTGGAGCAAACCTGAATTCACGTCGGTCGGAATTGGGTGTTTTGAACAATGGGTAGTGTTCGCTTTTGCCACCGATTCGCCTACCGGAAGCTTTTCTTCTGCCGTGAATTTGTCTGATTTGGGTCTTCGACATTTTTACTTGGTGTTATCCGTGCTGTTGGGGTTGCTTCTTCTCTCGGGTTGAGGACCGTTTTCCTTTCCATCTCAAACGACATGTCGGTCGGGTTCTGGAAATTTCAAGCATCCTGCCACAATAATTACATTCTTTTTTTCTTTATTTTGTGTTCGTTTTTACAAGTGTTTTTCATCGAATTGTTATCTTAAATTCTTATCTTAAGGAGGAAAAAAAGAGTTTTTCTAAAGCCG

Coding sequence (CDS)

ATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACATTGTTGCCCATGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAATGTGAAAGAAGACGTGCTTTTCCAAGCCATGAACAGCTATAGAAAGTCCATAAAACTTACCCCCATGAACAAGAACTCCAAAGCAGGCTGCCTAGTCAAGCAAATCGCTTGGGACTTCGACGACCAGTCGCCCCTCAGCATCTTCCTCAGCGGCTCCACCATTGCACCAAGCAACTTCTCCCAACTCCCTAGTCTACCCGACTACCTGTCCAAATGCAAAATCGAGCTCAATCACACAAAAAATGGCCTGATTTTGCCTCTCCATATCCCCACTTTGGCATTGAATCTTGTTCTCCATGAATGTACAAATTCCCAAATGGCTAAGTACTGGAGCAAACCTGAATTCACGTCGGTCGGAATTGGGTGTTTTGAACAATGGGTAGTGTTCGCTTTTGCCACCGATTCGCCTACCGGAAGCTTTTCTTCTGCCGTGAATTTGTCTGATTTGGGTCTTCGACATTTTTACTTGGTGTTATCCGTGCTGTTGGGGTTGCTTCTTCTCTCGGGTTGA

Protein sequence

MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLLLLSG

Homology

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +EDVL   +NSYR S+ LT +  N  A CL  +IA  F +Q   +   +GS   P     
Sbjct: 29  EEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTN--TTGSASVPGTTPG 88

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
            P+LP+ LSKC++    T++G ILP  +P L  +LVL   T SQ +K  +  +FT +GIG
Sbjct: 89  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 148

Query: 154 CFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLL 198
             + W+V    T +P GS+S A N          LV S L+ LL
Sbjct: 149 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLL 190

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.0e-20
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +ED+L   +NSYR +  LT ++KN  A CL  +IA  F ++   +   +GS   P    Q
Sbjct: 28  EEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTND--TGSATVPGTEPQ 87

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
             + P  L+KC + ++ T++G I+P  +P L  NLVL   T SQ +   +  +FT +GIG
Sbjct: 88  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 147

Query: 154 CFEQWVVFAFATDSPTGSFSSA 176
             + W+V    T++P GS+S+A
Sbjct: 148 KEDDWIVVVLTTNTPEGSYSTA 167

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-13
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 35  EDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQL 94
           E++LF   N YR+S+ LT + KN  A CL  ++     +Q   +   +GS   P     +
Sbjct: 30  ENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTN--TTGSASVPGTDPGI 89

Query: 95  PSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGC 154
           P+ P+ L+KC++  N T++GLIL +  P       L    N  + K  +  +FT  G+G 
Sbjct: 90  PNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFAN-VLTKNLNDSKFTGAGVGI 149

Query: 155 FEQ--WVVFAFATDSPTGSFSSA 176
                W+V    T++P GS+S++
Sbjct: 150 DSDGIWLVTVLTTNTPGGSYSNS 169

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy TrEMBL
Match: A0A6J1FI01 (uncharacterized GPI-anchored protein At5g19250-like OS=Cucurbita moschata OX=3662 GN=LOC111444310 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60
           MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA
Sbjct: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60

Query: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120
           GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH
Sbjct: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120

Query: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180
           IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD
Sbjct: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180

Query: 181 LGLRHFYLVLSVLLGLLLLSG 202
           LGLRHFYLVLSVLLGLLLLSG
Sbjct: 181 LGLRHFYLVLSVLLGLLLLSG 201

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy TrEMBL
Match: A0A6J1HLK3 (uncharacterized GPI-anchored protein At5g19250-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465647 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60
           MAL SHKLGFFLY VAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA
Sbjct: 1   MALPSHKLGFFLYCVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60

Query: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120
            CLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH
Sbjct: 61  DCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120

Query: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180
           IPTLALNLVLHECTNSQ AKYWSKPEFTSVGIG +EQWVVFAFATDSP GSFSSAVNLSD
Sbjct: 121 IPTLALNLVLHECTNSQTAKYWSKPEFTSVGIGSYEQWVVFAFATDSPPGSFSSAVNLSD 180

Query: 181 LGLRHFYLVLSVLLGLLLLSG 202
           LGLRHF+LV SVLLGL LLSG
Sbjct: 181 LGLRHFHLVSSVLLGLFLLSG 201

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy TrEMBL
Match: A0A6J1HMX6 (uncharacterized GPI-anchored protein At5g19250-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465647 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.9e-85
Identity = 161/169 (95.27%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 33  VKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFS 92
           VKEDVLFQAMNSYRKSIKLTPMNKNSKA CLVKQIAWDFDDQSPLSIFLSGSTIAPSNFS
Sbjct: 39  VKEDVLFQAMNSYRKSIKLTPMNKNSKADCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFS 98

Query: 93  QLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGI 152
           QLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQ AKYWSKPEFTSVGI
Sbjct: 99  QLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQTAKYWSKPEFTSVGI 158

Query: 153 GCFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLLLLSG 202
           G +EQWVVFAFATDSP GSFSSAVNLSDLGLRHF+LV SVLLGL LLSG
Sbjct: 159 GSYEQWVVFAFATDSPPGSFSSAVNLSDLGLRHFHLVSSVLLGLFLLSG 207

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy TrEMBL
Match: A0A6J1HS73 (uncharacterized GPI-anchored protein At5g19250-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465647 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.9e-85
Identity = 161/169 (95.27%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 33  VKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFS 92
           VKEDVLFQAMNSYRKSIKLTPMNKNSKA CLVKQIAWDFDDQSPLSIFLSGSTIAPSNFS
Sbjct: 78  VKEDVLFQAMNSYRKSIKLTPMNKNSKADCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFS 137

Query: 93  QLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGI 152
           QLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQ AKYWSKPEFTSVGI
Sbjct: 138 QLPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQTAKYWSKPEFTSVGI 197

Query: 153 GCFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLLLLSG 202
           G +EQWVVFAFATDSP GSFSSAVNLSDLGLRHF+LV SVLLGL LLSG
Sbjct: 198 GSYEQWVVFAFATDSPPGSFSSAVNLSDLGLRHFHLVSSVLLGLFLLSG 246

[Close]

BLAST of CmoCh12G010950.1 vs. ExPASy TrEMBL
Match: A6YTC6 (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.4e-75
Identity = 147/201 (73.13%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60
           MA  + KLG +L  +AHGLLLL+  VH D   V ED LF+AMN YR S +LTPMN+NSKA
Sbjct: 209 MAFTTPKLGLYLCGLAHGLLLLASLVHCD---VNEDTLFKAMNIYRSSKELTPMNRNSKA 268

Query: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120
            C VKQIAWDFDDQ PLSIF SGS I PSN +QLP+LPDYL++C IELN+TKNGLILPLH
Sbjct: 269 DCFVKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLH 328

Query: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180
           IPTL  NLVLH CT+SQMA Y SKPEFTS+GIGC+EQW VFAFATDSPTGSF+SAV LS 
Sbjct: 329 IPTLVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSK 388

Query: 181 LGLRHFYLVLSVLLGLLLLSG 202
           LGL HFYLV S+L GL LLSG
Sbjct: 389 LGLHHFYLVSSLLFGLFLLSG 406

[Close]

BLAST of CmoCh12G010950.1 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +EDVL   +NSYR S+ LT +  N  A CL  +IA  F +Q   +   +GS   P     
Sbjct: 29  EEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTN--TTGSASVPGTTPG 88

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
            P+LP+ LSKC++    T++G ILP  +P L  +LVL   T SQ +K  +  +FT +GIG
Sbjct: 89  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 148

Query: 154 CFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLL 198
             + W+V    T +P GS+S A N          LV S L+ LL
Sbjct: 149 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLL 190

[Close]

BLAST of CmoCh12G010950.1 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 101.7 bits (252), Expect = 7.2e-22
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 8   LGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQI 67
           L F++  +    L+ +C V     N  ED L Q +NSYR + ++ P  KN KA C+  +I
Sbjct: 9   LSFYIIHLLIFSLISTCVV----SNQAEDNLLQGLNSYRTAQRVPPFAKNEKADCVADEI 68

Query: 68  AWDFDDQSPLSIFLSGSTIAPSNF-SQLPSLPDYLSKCKIELNHTKNGLILPLHIPTLAL 127
           A   +DQ P +   + ST+ P +   +L +  D LS+CKI+ N T++GLILP+ IP    
Sbjct: 69  ADKLEDQ-PCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIP 128

Query: 128 NLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAV 177
            L L   T +  A+Y +   +   G+G  ++W+V    T +P GSF++ V
Sbjct: 129 TLALTNYTQTGYARYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGV 173

[Close]

BLAST of CmoCh12G010950.1 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 99.4 bits (246), Expect = 3.6e-21
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +ED+L   +NSYR +  LT ++KN  A CL  +IA  F ++   +   +GS   P    Q
Sbjct: 28  EEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTND--TGSATVPGTEPQ 87

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
             + P  L+KC + ++ T++G I+P  +P L  NLVL   T SQ +   +  +FT +GIG
Sbjct: 88  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 147

Query: 154 CFEQWVVFAFATDSPTGSFSSA 176
             + W+V    T++P GS+S+A
Sbjct: 148 KEDDWIVVVLTTNTPEGSYSTA 167

[Close]

BLAST of CmoCh12G010950.1 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-14
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 35  EDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQL 94
           E++LF   N YR+S+ LT + KN  A CL  ++     +Q   +   +GS   P     +
Sbjct: 30  ENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTN--TTGSASVPGTDPGI 89

Query: 95  PSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGC 154
           P+ P+ L+KC++  N T++GLIL +  P       L    N  + K  +  +FT  G+G 
Sbjct: 90  PNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFAN-VLTKNLNDSKFTGAGVGI 149

Query: 155 FEQ--WVVFAFATDSPTGSFSSA 176
                W+V    T++P GS+S++
Sbjct: 150 DSDGIWLVTVLTTNTPGGSYSNS 169

The following BLAST results are available for this feature:

BLAST of CmoCh12G010950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59833	1.6e-21	38.41	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q84MC0	5.0e-20	35.92	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q84VZ5	3.5e-13	30.77	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CmoCh12G010950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FI01	2.1e-109	100.00	uncharacterized GPI-anchored protein At5g19250-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1HLK3	1.4e-102	95.02	uncharacterized GPI-anchored protein At5g19250-like isoform X3 OS=Cucurbita maxi...	[more]
A0A6J1HMX6	7.9e-85	95.27	uncharacterized GPI-anchored protein At5g19250-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1HS73	7.9e-85	95.27	uncharacterized GPI-anchored protein At5g19250-like isoform X1 OS=Cucurbita maxi...	[more]
A6YTC6	7.4e-75	73.13	GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=...	[more]

BLAST of CmoCh12G010950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19250.1	1.1e-22	38.41	Glycoprotein membrane precursor GPI-anchored	[more]
AT1G54860.1	7.2e-22	34.71	Glycoprotein membrane precursor GPI-anchored	[more]
AT3G06035.1	3.6e-21	35.92	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	2.5e-14	30.77	Glycoprotein membrane precursor GPI-anchored	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33976:SF11	SUBFAMILY NOT NAMED	coord: 34..199
None	No IPR available	PANTHER	PTHR33976	OS07G0645000 PROTEIN	coord: 34..199
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh12G010950	CmoCh12G010950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010950.1:exon:1400	CmoCh12G010950.1:exon:1400	exon
CmoCh12G010950.1:exon:1399	CmoCh12G010950.1:exon:1399	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010950.1:three_prime_utr	CmoCh12G010950.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010950.1:cds	CmoCh12G010950.1:cds_2	CDS
CmoCh12G010950.1:cds	CmoCh12G010950.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh12G010950.1	CmoCh12G010950.1-protein	polypeptide