CmoCh09G009590.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTAAAGGAGGCAAATCGGAACGTGGTAGAACAATCGTTTTCCTTCCCCTTTCCATCTTCCTCCGCTTGCTGTCTCTCTTTGAAGCCGTTCCCGGTTGATCTTCCACGAGTTTCTCCGGTCTCTGTTGTTCTGGTAAGCGCTTTCAACGTGTATGTTTTTGTTCTTGTTTGTTTGATTTCAGTTCTCCTTTGGTTGCTGAGATGTTTGTCTAGGGAATCTGTTTTCTGTGATCTTTGTTTTGAATGTATGTTGTTTTTCTTTTTCTGTTTGTGCGTTTTTCATTTTGGCCTCTCGTGATGTCTGCATTTTATTTGCATGTTCCTTTCTGGATGTGTTCTGAATCGTGAAAGAATGCACTTATGTGGATTTTCTTACTGTGACTTGGTCGGTGCTCTGATTTTCGTTTTACTTGCTTGAATAGAAGCTGAGAAAATGAGTTTTGGAGTCGTAAGGCGACGTATTGCGTCTGGAGGCTCTAATCTGGTAAGTTCAGAGCGTTCTATCCATTTTCTTCAGGATACATGATGAATATAGGATTTGTACCGGTAGGCAGGACTTGTCTGATTCTGTAGTGCTTTCATTTCAGTTTTCGGCGCAGTATTTGCGGGGAATTCGACCTTCCATTTCTGCAGGAAGAGTTCGCTCCGTTGCCGAAAAAGAGGTAGTTGCGTTTTCTGAAGTTTTTGTCTCTTTGTTTGCTTTGTTTGGAGGTAGTTTCTAATTTTGGCTTGATGTATTTTCATAATGCACGAATGACCTCTTATACGCTATAGGTATTTGCTATGTATCTCTTTGTTCTTCCTTACACCTCTCTGTGAAATGAAATGAAAGTTAAAAGCGATGTTATTTGATTATTTTCGTGCAATAATCTATTCACGAATCGTACTGCCTTGTTTTTTTTCATTCCGCATTTAGATTTTGCACCAGTGTAGGAGCTTTGGACATGTCAGAAATTTTTCTCACCTACTTTCACATGGTAATTTTGATTGCGGCCTCTCTTTATATTTGTTTAAGCTCCTACCTAGTTTAAATATACGTTCTCCTTTGATTGATTGATACCCCTACGTTGCAGGTGGCCTTGCTAGTCCTCAATCTCTAAGGTCAGTTACCAATATACAACTTCGCGTATGTGGCCCTTGTTTACTTTTGACCTTGAGGCAAAATTTTATTTTTCTTTTCCTCCTATTTCTTGGTGAATGGTGTTTGCCATCATTTGTGATTGTGTATTCTTCATTTTCATGAATGTGTTTACAGACCAATTTACCATTCCTTGGCATGTTTGACACATGTCTTGACTCAGAAATGGGGTCTCATCGTGTATCTAGCCTTATGTTCTGCTTTTCTGAGGTCCATCTATCTATCACACTATCTATACATGGGTTAGGCTGACATGTATTGTGAATAAGATTTTTCTAAATAATTAAAAAAAATTAACAACTCGATGACAAAACCCAATCTGAAAAATAGAGGGGTGGGGTTGTGAATCCTATTCGAGTCATTTGGGTCACCAACTTGAGCAACTAGTCCAAAAATTTTCTCCAACCTATCCATGTATACCCCTATTCTTATGACAGGTAGTGATGGGAATTCATCCTCTATTTTGATTTCTCTTGGGTCTTTGATATCTCAATGGCAATGATGAATTTTAAGTTGTTTCTGGATTGGATTTGAGATTCTTGCTATCAATGTGAATCCAACTCTTTTTTTTTTTTTTTTTGTTAAATTTTAAAATATTATGAGCATTGTGAAACCCCATTCAACCTGAAACTTGACTTCCATCAAAAGGAAGAAAAAAACTGAACAGAGAATTAGCAATTGAACTTATGATATTAATTTAGTTTGGCACGGGTAGTTGGTCAATAGCCAATTTTAGCATTAAGACATTATATATCTACTATAGGAGTTGGTCATTTGACTGGTAGATCTTTTGTTACTTGTTATAATTACCATTACAATGTTGCTTTTCTCATTGAAACGAAGTTTCTGCGGAATATGGGACACGTGTAGAATACTTTTCAACTTTTTTTTTTTCCCCTTTTAATAACAACTTTTCATTAGTTCTTTTGCTTCTGCCCCCTTTGGTTTTAATTTTTATATGGTGATCAGGGTTGCTTTTGCAAGTATGCAGCAAAGTTCTATGATGCAATTGAATGGTCGGAACTTCTCTTCAGATAATGGTGCGACATCACTTTTTTTTCTTAATTATTTTTGCTTGTGTTTCTTCTTGAACATTTGCTGGGTGTTAGTTGGACTGTGTTTACCTGATGTTGGTTATCACGCTAGCAACATTAGGGTTCTTTATAATGACACTAATTGGAGATCCCTTATGCAATCTCCATTGGTTTCCTCTCCTTCATTTCATATTGTCAATGTAAAGTATAGTTACTTTTCACATAAACAGAGGGAGAAAATTAAAATTACCCCATCTTTCTTCCAACCAACATTCATAACAAAAAATGATTTTTTCTTTGTTGGGGGGAGGTGACTGTGAATAGATTTTTTATGATAAAATTTAATAAAGTTGACCATTAATGATCAGCTTCCCTCTTTCTGTTGTTGTGAGTCTCAAGTGTGTAGCCTGCGTGTTTAAGTTGTTGCATGAAGGCTTAAAATGCCAATACAGTTTAAACTTTGTTAAACTGACATCACTTAGAGAAATTGGAATTATTTCATTTACTCTTCCATCAGATTTTGCATTAAGTTTACTTGCTATAGGAGTTAAGTTAGTATGCTAGGTTTTTATTTGAAACTAAAAGTGTTTGGGCGTGCTATTGTATGCTTATAATGCTGTTTTTGATGTTGCTAGCTTGCTTATTTATTCAGTGAAGAATACACAGCAAGCTCACTCTGTGCACGGCTTTCTTTTTCCTTAG ATGGGGGTAAAGGAGGCAAATCGGAACGTGGTAGAACAATCGTTTTCCTTCCCCTTTCCATCTTCCTCCGCTTGCTGTCTCTCTTTGAAGCCGTTCCCGGTTGATCTTCCACGAGTTTCTCCGGTCTCTGTTGTTCTGGTAAGCGCTTTCAACGTGTATGTTTTTGTTCTTGTTTGTTTGATTTCAGTTCTCCTTTGGTTGCTGAGATGTTTGTCTAGGGAATCTGTTTTCTGTGATCTTTGTTTTGAATAAGCTGAGAAAATGAGTTTTGGAGTCGTAAGGCGACGTATTGCGTCTGGAGGCTCTAATCTGTTTTCGGCGCAGTATTTGCGGGGAATTCGACCTTCCATTTCTGCAGGAAGAGTTCGCTCCGTTGCCGAAAAAGAGGTAGTTGCGTTTTCTGAAGTTTTTGTCTCTTTGTTTGCTTTGTTTGGAGGTATTTGCTATATTTTGCACCAGTGTAGGAGCTTTGGACATGTCAGAAATTTTTCTCACCTACTTTCACATGGTGGCCTTGCTAGTCCTCAATCTCTAAGGTCAGTTACCAATATACAACTTCGCACCAATTTACCATTCCTTGGCATGTTTGACACATGTCTTGACTCAGAAATGGGGTCTCATCGTTTTGGCACGGGTAGTTGGTCAATAGCCAATTTTAGCATTAAGACATTATATATCTACTATAGGAGTTGGTCATTTGACTGGGTTGCTTTTGCAAGTATGCAGCAAAGTTCTATGATGCAATTGAATGGTCGGAACTTCTCTTCAGATAATGATTTTGCATTAAGTTTACTTGCTATAGGAGTTAACTTGCTTATTTATTCAGTGAAGAATACACAGCAAGCTCACTCTGTGCACGGCTTTCTTTTTCCTTAG ATGAGTTTTGGAGTCGTAAGGCGACGTATTGCGTCTGGAGGCTCTAATCTGTTTTCGGCGCAGTATTTGCGGGGAATTCGACCTTCCATTTCTGCAGGAAGAGTTCGCTCCGTTGCCGAAAAAGAGGTAGTTGCGTTTTCTGAAGTTTTTGTCTCTTTGTTTGCTTTGTTTGGAGGTATTTGCTATATTTTGCACCAGTGTAGGAGCTTTGGACATGTCAGAAATTTTTCTCACCTACTTTCACATGGTGGCCTTGCTAGTCCTCAATCTCTAAGGTCAGTTACCAATATACAACTTCGCACCAATTTACCATTCCTTGGCATGTTTGACACATGTCTTGACTCAGAAATGGGGTCTCATCGTTTTGGCACGGGTAGTTGGTCAATAGCCAATTTTAGCATTAAGACATTATATATCTACTATAGGAGTTGGTCATTTGACTGGGTTGCTTTTGCAAGTATGCAGCAAAGTTCTATGATGCAATTGAATGGTCGGAACTTCTCTTCAGATAATGATTTTGCATTAAGTTTACTTGCTATAGGAGTTAACTTGCTTATTTATTCAGTGAAGAATACACAGCAAGCTCACTCTGTGCACGGCTTTCTTTTTCCTTAG MSFGVVRRRIASGGSNLFSAQYLRGIRPSISAGRVRSVAEKEVVAFSEVFVSLFALFGGICYILHQCRSFGHVRNFSHLLSHGGLASPQSLRSVTNIQLRTNLPFLGMFDTCLDSEMGSHRFGTGSWSIANFSIKTLYIYYRSWSFDWVAFASMQQSSMMQLNGRNFSSDNDFALSLLAIGVNLLIYSVKNTQQAHSVHGFLFP Homology
BLAST of CmoCh09G009590.1 vs. ExPASy TrEMBL
Match: A0A6J1FFV0 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111443557 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32 Identity = 96/178 (53.93%), Postives = 98/178 (55.06%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. ExPASy TrEMBL
Match: A0A6J1IE26 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111476401 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31 Identity = 95/178 (53.37%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. ExPASy TrEMBL
Match: A0A5D3DHP6 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00850 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 8.4e-26 Identity = 86/178 (48.31%), Postives = 93/178 (52.25%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. ExPASy TrEMBL
Match: A0A1S3BHH7 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo OX=3656 GN=LOC103490134 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 8.4e-26 Identity = 86/178 (48.31%), Postives = 93/178 (52.25%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. ExPASy TrEMBL
Match: A0A6J1J1X8 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111480576 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24 Identity = 84/179 (46.93%), Postives = 90/179 (50.28%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. NCBI nr
Match: XP_023535618.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 149.1 bits (375), Expect = 4.3e-32 Identity = 96/178 (53.93%), Postives = 98/178 (55.06%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. NCBI nr
Match: XP_022937185.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 149.1 bits (375), Expect = 4.3e-32 Identity = 96/178 (53.93%), Postives = 98/178 (55.06%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. NCBI nr
Match: XP_022975807.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 146.7 bits (369), Expect = 2.1e-31 Identity = 95/178 (53.37%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. NCBI nr
Match: KAG7024928.1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-30 Identity = 94/178 (52.81%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of CmoCh09G009590.1 vs. NCBI nr
Match: KAG6592050.1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-30 Identity = 94/178 (52.81%), Postives = 96/178 (53.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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