CmoCh08G005270.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G005270.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type E3 ubiquitin transferase
Location	Cmo_Chr08: 3291566 .. 3295932 (+)
Sequence length	1404
RNA-Seq Expression	CmoCh08G005270.1
Synteny	CmoCh08G005270.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCCAGTTTGGTGCAGAGTCATCCATTGGGCAGAGGGGTATTTTTGGAATTATTCGTAAAATGAATGGCCGATGATTAAATTGGATACTGACCGCCAGAAAGCCCTAGGTTCAGGCGCGAGCGAGAGCTTCTTTCCTTCTCCGAACGAACAATGAAGTGCGTGGAATTCGTTCTTTTTTCCACTTTCCATTTCCCTCCACTGCTTATATCTTATTCAAATCTTCTCTTACTTGTTTAATCAACCTTTTCAATCGTCTTTTCTTCCATTTTCCGCTTCTAACTTCGATCGCCATGTCTAAAAGGTGAGGTTCTGTTCTTTTGTTTCGATTCTGCTTCTTTCTATGTTCTTGTTGATTTTGTCTGGCAGATGCTTGTTTGTTCGTTTTCTCGTGTATTTTTAAAAGTTTTGATGATTGGATGGCAGATTACGCGCTTTGATTTTCTTTTTCTTTTTCTTGAATAGTATCTTCCGGTTCGTGGTTTTCTTTGTTTGGATGTACCTTCTCGAGTAATCTTGATCATGGTTCTTTGGTATGTGGTTTGATTATTAGGTGTATGCTATTTTGAGGGGCTGGGTGATCAAATATGTGGTTGGAAATGTTTGGAATTTGAGTTTCACGAAAGCTGTTTTGTTGGGTGGTTGTTGTTGAGGCTGGACTTTATGTTTTTGAAGTTTTGTTATTGTATATCTTGGAATTAACACGTTCTTAGCGTCTTAATTTACTTTGGTGGATTGTTTAGGGTTCTATGCAAGTATTTTGCGCATGGAGCATGCTTGAAAGGGGAGTATTGTGAGTTTTCGCATGACTGGACGGCTCCACCTAGCAATGTAAATATTACTTCCACTCCTCTGCATCGCTATGCATTTTAATGTAAACCAACTGTCAGTTTGGCACTCCGATCATTCTTTCTTTCTGATGTATCATTCGTGAAACAGGTTTGCACTTACTATCAAAAGGGAAGGTGTGCTTTTGGCAGTCGATGCAGATATGACCATGTTAAAGTTTCTCATGCAGAGTCATCAGCTTCTTCTAATTCTCAGCAACCTCACGTGTCTGAATCTGTTTCAATAGCTCATACTCTATTATCAAGTCCACTTTCTCCTTCACCTGGGTCGACAATTGAGCTTGCTGGTTCAAGGATATCCTGTCTTCCCTCACACGTTGAATCTGCTTGGAGTGTAGAGTGTGAGCTTCCATCTGGTCTTGATGATTGGGGGAGTAGGGAGACAAGGATTATTAGTCCAGCCGATTTACCTATTTGCTCTTTTTCTGCTGCTGGTACTAATTGTCCGCGTGGTGATAATTGCCCTCACATTCATGGGGACTTATGTCCCACGTGTGGAAAACAATGTTTACATCCTTTTAGGACGGATGAAAGGGAGGAGCATATGAAGGCATGTGAGAAAAAGCAAAAACATCTCGAGTCTTTGAAACATAGCCAAGAAATAGAGTGTAGTGTCTGCCTCGAGCGTGTCCTTTCTAAAACCGAAATAGCCGAGAGGAAGTTTGGGCTTCTATCAGAATGTGATCATCCGTTCTGCATTTCTTGTATTAGAAACTGGCGTAATAGTTCATCTACCTCCGGAATGGATGTTAACAGTGCTTTAAGAGCCTGCCCAATTTGTAGGAAGCTATCATACTTTGTTATTCCAAGCGTCATTTGGTATTCTTCCAAGGAAGAAAAACAAGAGATCGTTGATAGCTACAAGTCAAAGCTGCGGTAAATTTATGTGCTTAATTCCTAATATTTGATTGCATTCTGGATACTATTAAATTTTGTCCATTCTGTTCCCGTTTTTTATGTTTTATAACCAAACTCATTTTTGTCTATGCCATATCAAATGTAACCTGGAAAGCTCCATAGTCCACAGGAATGATCAATATGCTTTCTAGAAGAGTGGAAACTGCATAACTGTTCTAAAGTAATTGTGTGAGCTGTTGAAATAATTTCTGTACTCTGATCGTGCAACTTTATATTATTTTCATGCACAGATCAATCGATTGCAAGCACTTTAACTTTGGAAATGGAAACTGCCCATTTGGATCTAGCTGTTTTTACAAGGTAAATTTTTCTCTGAAATCATCTACTTCAGTGTTCTTATCCTGATTGTGCTCTTCTAAGCAAGCTGGATGTTGCTGTAGCCTTTGGAATTGCAATTTTCCTGAAATTTTTTCTTCTTCCTTTTTTTTTTTCTTTATTCCTTTATCCATATTGCTTTTTAACCGATCATTGATATGCTGAATGGAAATCTCAACCTGTTTGGTTGTTCTAATATTTAAATGCCTATGAAGTATGTTTGATTGGTTACATCTTTGATTTCATGGACATGAGTTTATGGAAGGAATTCTTTTTGTGATCTGGAGACGGAAATATAGTGCAACAGAAGATTCTTTTTGTTCTTATGATCCTCCAATGGTTTTATAAGCGTCTCCATTTACCATGGCCATCAAATCATGGTGGGTTAGATATGTGGAATCGTACAATTTGAACTTGCATGTTGACAAAGTAAATTTGCTAATCATTTGGCCAGCTTTTTCACTATGTTTTTGTGCAATTTTCTTGCTATTAGGGGTGCTCATAATAATAGACTACCAATATGATGAAAAATATATAAATTTCTGGTTCAGTGCCTCTTAGTGTGTTTCATTTTGTTCTTTTGACACATAATGGTAAGGGTGCCTCTTTCTTGTCCATTTTTTTTTAACAAAAAAACCAAAGGATGCCTCCATTTCTCATAGGTATCCTCTCTTGGGAAGCCCTGTTTCAGTTAGAATAGTTCGAGGGTGAGGACGAGGGGTGAAATCCCTTTCTTTGCTCCCACCAGTGTTCCTACTATAACCAAATCTCATAAATAATAACTTGCTTTGGTGTATACTATAGATAATCTATATCCATTATCTTTTCGTTTTCTGTTTCTAAAATTCATGCTTTATAACCAATTTCACTGTTCTGTAATCTATTTTTAAAAATCCTAAACAAATTATTTTTAGAAAGTAGATTTTAAAACTATGTTAATTGTGCTTGATGGGAACTAAGAATTTAAAAGTGCTTTTAAAATGTGATAAACAAAAAAATGTATGATCTTAAAATTTACTTGAGTCTTTGAATAACAATTTTCTTTAGTCTTCAATTTAGTTTTGAGGATATTTTAAAAGCCTACTTTATTTTTTTTATTAAAAACAAAATGTAAAGAAAATTTTTAATAGTTAAAAGAAAACCCTCCAAATTTTTGGTTTTATGTTTTTAAAATTTGGCTGAGAATTTTAAACTGGCTTTTGAAAAGCAGAAAACAAAAAATCTAAACTAAGAAACGGTTGGTTAATTTTCGAAAAATTAAAATTCTATGTTTATTAAGCAAGGCCTAAGTTTTATCTACAAATGTCCATGTAATTTGTGGGGATGATTTCACAATTTCTCAAACAAAATCTTTGCAATTACTTTTGTTGCCGTCTTAGAAAATTTTCTGGTCTCAATCTGGCTGAAAGTGATGTGCTTACTACTTTGGCTGATTGGCTCTGCAACCTCTGTTTAGTAATGTCTTATCGGTCTTTTAGTTAAATTACCAATATGATGAAATTATTTAATTTTGCAAACCAATATTTTATTGCTAGACCTCCTATAAAAAAAAGAAAAAGAATGTATTGCTAGACCTGTTATAATTGATTGGTCTGTTTTAAGGTGAAGATAATAGACCTCTCTGTTTCAAATTAATAAAATTAATATACTTATAGCTATTGGATTTAAAAGTGTTATCATGAGGATATTGTAGGTTAGCACCATAGAATGACTGGAGGGACCTCTTCTAAATTGCGTTCTTTTAATTAGGAAAACTGTTATTGGAATCATTCATCAGTTCTAAAGCCAATCCATATGCTTGCAAATCATTGGCGCGTGTCTATTTTGGAGAATAAATATGCAACTGCTCTGTCACATTCTTCTGTCTCCCAAAAACCTTCAGTCAGCTTTTGTGGTAAATATTGAAAGATGTGGTAGACATAAGCAGTTCTGTTCATTGCGCATTCTGTTGTCATTTAATTTCATTAGAGCAGATTGGCTTTCCAATCTTTTGATTGATACAATGTTTGTTGTGTTCCAGCACTTGGTCAAGCCTGGTTCATACACATGGAAATATCACAGGCCACCTCCGCCCCGACCACGATCACAGAGAACTCCTCCTAGCAGATCTAATATTGTGGATATGGATGCCTTTTTTGATATGTTTGAAGACTTAGAGGATTTGGATTTTAGTGCTGAAGATTTAGATTTTGAAGATTTAACACCTTTGGAGATGGCATTTGTTCTAATGCAGTTGGGTTGTGAAGCCAACTTGTCAAGTGATGAGGAGAATTATAGTTTTTGA

mRNA sequence

ATGCCCCCAGCGCGAGCGAGAGCTTCTTTCCTTCTCCGAACGAACAATGAAGTGCGTGGAATTCGTTCTTTTTTCCACTTTCCATTTCCCTCCACTGCTTATATCTTATTCAAATCTTCTCTTACTTGTTTAATCAACCTTTTCAATCGTCTTTTCTTCCATTTTCCGCTTCTAACTTCGATCGCCATGTCTAAAAGGGTTCTATGCAAGTATTTTGCGCATGGAGCATGCTTGAAAGGGGAGTATTGTGAGTTTTCGCATGACTGGACGGCTCCACCTAGCAATGTTTGCACTTACTATCAAAAGGGAAGGTGTGCTTTTGGCAGTCGATGCAGATATGACCATGTTAAAGTTTCTCATGCAGAGTCATCAGCTTCTTCTAATTCTCAGCAACCTCACGTGTCTGAATCTGTTTCAATAGCTCATACTCTATTATCAAGTCCACTTTCTCCTTCACCTGGGTCGACAATTGAGCTTGCTGGTTCAAGGATATCCTGTCTTCCCTCACACGTTGAATCTGCTTGGAGTGTAGAGTGTGAGCTTCCATCTGGTCTTGATGATTGGGGGAGTAGGGAGACAAGGATTATTAGTCCAGCCGATTTACCTATTTGCTCTTTTTCTGCTGCTGGTACTAATTGTCCGCGTGGTGATAATTGCCCTCACATTCATGGGGACTTATGTCCCACGTGTGGAAAACAATGTTTACATCCTTTTAGGACGGATGAAAGGGAGGAGCATATGAAGGCATGTGAGAAAAAGCAAAAACATCTCGAGTCTTTGAAACATAGCCAAGAAATAGAGTGTAGTGTCTGCCTCGAGCGTGTCCTTTCTAAAACCGAAATAGCCGAGAGGAAGTTTGGGCTTCTATCAGAATGTGATCATCCGTTCTGCATTTCTTGTATTAGAAACTGGCGTAATAGTTCATCTACCTCCGGAATGGATGTTAACAGTGCTTTAAGAGCCTGCCCAATTTGTAGGAAGCTATCATACTTTGTTATTCCAAGCGTCATTTGGTATTCTTCCAAGGAAGAAAAACAAGAGATCGTTGATAGCTACAAGTCAAAGCTGCGATCAATCGATTGCAAGCACTTTAACTTTGGAAATGGAAACTGCCCATTTGGATCTAGCTGTTTTTACAAGCACTTGGTCAAGCCTGGTTCATACACATGGAAATATCACAGGCCACCTCCGCCCCGACCACGATCACAGAGAACTCCTCCTAGCAGATCTAATATTGTGGATATGGATGCCTTTTTTGATATGTTTGAAGACTTAGAGGATTTGGATTTTAGTGCTGAAGATTTAGATTTTGAAGATTTAACACCTTTGGAGATGGCATTTGTTCTAATGCAGTTGGGTTGTGAAGCCAACTTGTCAAGTGATGAGGAGAATTATAGTTTTTGA

Coding sequence (CDS)

ATGCCCCCAGCGCGAGCGAGAGCTTCTTTCCTTCTCCGAACGAACAATGAAGTGCGTGGAATTCGTTCTTTTTTCCACTTTCCATTTCCCTCCACTGCTTATATCTTATTCAAATCTTCTCTTACTTGTTTAATCAACCTTTTCAATCGTCTTTTCTTCCATTTTCCGCTTCTAACTTCGATCGCCATGTCTAAAAGGGTTCTATGCAAGTATTTTGCGCATGGAGCATGCTTGAAAGGGGAGTATTGTGAGTTTTCGCATGACTGGACGGCTCCACCTAGCAATGTTTGCACTTACTATCAAAAGGGAAGGTGTGCTTTTGGCAGTCGATGCAGATATGACCATGTTAAAGTTTCTCATGCAGAGTCATCAGCTTCTTCTAATTCTCAGCAACCTCACGTGTCTGAATCTGTTTCAATAGCTCATACTCTATTATCAAGTCCACTTTCTCCTTCACCTGGGTCGACAATTGAGCTTGCTGGTTCAAGGATATCCTGTCTTCCCTCACACGTTGAATCTGCTTGGAGTGTAGAGTGTGAGCTTCCATCTGGTCTTGATGATTGGGGGAGTAGGGAGACAAGGATTATTAGTCCAGCCGATTTACCTATTTGCTCTTTTTCTGCTGCTGGTACTAATTGTCCGCGTGGTGATAATTGCCCTCACATTCATGGGGACTTATGTCCCACGTGTGGAAAACAATGTTTACATCCTTTTAGGACGGATGAAAGGGAGGAGCATATGAAGGCATGTGAGAAAAAGCAAAAACATCTCGAGTCTTTGAAACATAGCCAAGAAATAGAGTGTAGTGTCTGCCTCGAGCGTGTCCTTTCTAAAACCGAAATAGCCGAGAGGAAGTTTGGGCTTCTATCAGAATGTGATCATCCGTTCTGCATTTCTTGTATTAGAAACTGGCGTAATAGTTCATCTACCTCCGGAATGGATGTTAACAGTGCTTTAAGAGCCTGCCCAATTTGTAGGAAGCTATCATACTTTGTTATTCCAAGCGTCATTTGGTATTCTTCCAAGGAAGAAAAACAAGAGATCGTTGATAGCTACAAGTCAAAGCTGCGATCAATCGATTGCAAGCACTTTAACTTTGGAAATGGAAACTGCCCATTTGGATCTAGCTGTTTTTACAAGCACTTGGTCAAGCCTGGTTCATACACATGGAAATATCACAGGCCACCTCCGCCCCGACCACGATCACAGAGAACTCCTCCTAGCAGATCTAATATTGTGGATATGGATGCCTTTTTTGATATGTTTGAAGACTTAGAGGATTTGGATTTTAGTGCTGAAGATTTAGATTTTGAAGATTTAACACCTTTGGAGATGGCATTTGTTCTAATGCAGTTGGGTTGTGAAGCCAACTTGTCAAGTGATGAGGAGAATTATAGTTTTTGA

Protein sequence

MPPARARASFLLRTNNEVRGIRSFFHFPFPSTAYILFKSSLTCLINLFNRLFFHFPLLTSIAMSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF

Homology

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BLAST of CmoCh08G005270.1 vs. ExPASy Swiss-Prot
Match: E0X9N4 (Putative RING-type E3 ubiquitin transferase C3H69 OS=Arabidopsis thaliana OX=3702 GN=At3g63550 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 5.8e-120
Identity = 207/325 (63.69%), Postives = 253/325 (77.85%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MSKR+LCK+FAHGACLKGE+CEFSHDW  P +N+CTYYQKG C++GSRCRY+HVK S   
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNNICTYYQKGICSYGSRCRYEHVKASRPH 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLP-SHVESAWSVECEL 182
            SASS+S  P  S + S ++TL  + L   PG    +A   +S +P S ++  W+++   
Sbjct: 61  PSASSSSAVPRPSPA-SASNTLACAFL---PG----VAERDLSPVPSSSLKPTWNLDSLH 120

Query: 183 PSGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTD 242
              +D+  +     + P +LPICSF+AAG +CPRG+ CPHIHG +CPTCGK CLHPFR D
Sbjct: 121 QDSVDEVKTSNPGTVKPEELPICSFAAAG-DCPRGNECPHIHGTICPTCGKCCLHPFRPD 180

Query: 243 EREEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCI 302
           EREEH K CEKK K LE+LK SQEIEC VCLERVLSK   AERKFGLL+ECDH FCI+CI
Sbjct: 181 EREEHKKVCEKKHKQLEALKLSQEIECCVCLERVLSKATPAERKFGLLTECDHAFCIACI 240

Query: 303 RNWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDC 362
           RNWR+SS ++GMDVNS LRACPICRKLSYFV+PSVIW+S+ EEK+EI+D+Y+ KLRSIDC
Sbjct: 241 RNWRSSSPSTGMDVNSTLRACPICRKLSYFVVPSVIWFSAPEEKKEIMDNYREKLRSIDC 300

Query: 363 KHFNFGNGNCPFGSSCFYKHLVKPG 387
           KHF+FG+GNCPFG+SCFYKH    G
Sbjct: 301 KHFSFGDGNCPFGTSCFYKHAYHDG 316

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy Swiss-Prot
Match: Q5ZA07 (E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica OX=39947 GN=MKRN PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.1e-117
Identity = 211/334 (63.17%), Postives = 239/334 (71.56%), Query Frame = 0


Query: 64  SKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAES 123
           +KRVLCK+F HGACLKGEYCEFSHDW   P+NVCT+YQKG C++GSRCRYDHVKVS   +
Sbjct: 3   TKRVLCKFFMHGACLKGEYCEFSHDWNDQPNNVCTFYQKGSCSYGSRCRYDHVKVSRNPT 62

Query: 124 SASSNSQQPHVSESVSIAHTLLSSPL-------SPSPGSTIELAGSRISCLPSHVESAWS 183
            A   S       S S+       P        S +P   I +     S       + + 
Sbjct: 63  VAPPPSSSTTTRASSSLQPLSFGRPHHVGYQADSSNPRQQISMDVLAHSGSKPVWRNDFQ 122

Query: 184 VECELPSGLDDWGSRET----RIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGK 243
            E  L  G+ DW    T      +SPADLPICSF AAG NCP G+ CP +HGDLC TCGK
Sbjct: 123 HESVLEDGI-DWSISPTVQNQTTLSPADLPICSF-AAGGNCPYGEECPQMHGDLCTTCGK 182

Query: 244 QCLHPFRTDEREEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSEC 303
            CLHP+R DEREEH K CEK  K LESLK SQEIECSVCL+RVLSK   AERKFGLLSEC
Sbjct: 183 MCLHPYRPDEREEHTKLCEKNHKRLESLKRSQEIECSVCLDRVLSKPTAAERKFGLLSEC 242

Query: 304 DHPFCISCIRNWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSY 363
           DHPFCISCIRNWRN+S TSGMDVNSALRACPICRKLSY+VIPSV+WY SKEEK EI+D+Y
Sbjct: 243 DHPFCISCIRNWRNNSPTSGMDVNSALRACPICRKLSYYVIPSVLWYFSKEEKLEIIDNY 302

Query: 364 KSKLRSIDCKHFNFGNGNCPFGSSCFYKHLVKPG 387
           K+KL+SIDCK+F+FG G CPFGSSCFYKH  + G
Sbjct: 303 KAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYRDG 334

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy Swiss-Prot
Match: Q6IDS6 (E3 ubiquitin-protein ligase makorin OS=Arabidopsis thaliana OX=3702 GN=MKRN PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.4e-112
Identity = 197/324 (60.80%), Postives = 234/324 (72.22%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MS R+LCK+F HG+CLKGE CEFSHD   PP+NVCT+YQK  C +GSRCRYDHV+     
Sbjct: 1   MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR----- 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
             A+SN      SES       L   +S +P   ++  G       +  + + +V C   
Sbjct: 61  --AASNLPLSSDSES-------LDRSISTTPSRHLQQQGDN-----NDGDKSSNVYC--- 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
                        I P + PICSF+AAG +CPRG+ CPH+HGDLC TCGK+CLHPFR +E
Sbjct: 121 -------------IHPREYPICSFAAAG-DCPRGNQCPHMHGDLCNTCGKKCLHPFRPEE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEH K CEKKQKH+E+LK SQ+IECSVCL+R+LSK    ERKFGLL+ECDHPFCI CIR
Sbjct: 181 REEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWR+S+  SGMDVNS LRACPICRKLSYFV+PSV+WYSS EEK+EI+D YK+KLRSIDCK
Sbjct: 241 NWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCK 288

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPG 387
           HFNFGNGNCPFG+SCFYKH    G
Sbjct: 301 HFNFGNGNCPFGASCFYKHAYSDG 288

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-61
Identity = 142/422 (33.65%), Postives = 218/422 (51.66%), Query Frame = 0


Query: 64  SKRVLCKYFAHGACLKGEYCEFSHDWTA-PPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 123
           +K V C+YF HG C +GE C +SHD ++   + +C ++QKG CAFG RCRY+H K S  +
Sbjct: 19  TKHVTCRYFMHGLCKEGENCRYSHDLSSCKQTMICKFFQKGCCAFGDRCRYEHTKPSKQD 78

Query: 124 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIEL--------------AGSRISCLP 183
              SS    P    +  +A T    P+S  PG T                 A   +   P
Sbjct: 79  EVPSSKPSMP--LTAAPLAGT--PEPVSDGPGGTTGAQEKPQGSGAVDWVNAAEFVPGQP 138

Query: 184 SHVESAWSVECELPSGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCP 243
            +   A  V CE P  L +    + +        +C ++A G  C  G NC ++HGD+C 
Sbjct: 139 -YCGRADPVLCEGPGPLIEEEYEKEQANKEMKKQLCPYAAVG-ECRYGLNCAYLHGDVCD 198

Query: 244 TCGKQCLHPFRTDEREEHMKAC-EKKQKHLE---SLKHSQEIECSVCLERVLSKTEIAER 303
            CG Q LHP  T +R +H++AC E  +K +E   +++ S+++ C VC+E V  KT  +ER
Sbjct: 199 MCGLQVLHPSDTSQRSQHIRACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKTNPSER 258

Query: 304 KFGLLSECDHPFCISCIRNWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEE 363
           +FG+LS C H +C+ CIR WR++        +  +++CP CR  S FVIPS  W   KEE
Sbjct: 259 RFGILSNCCHCYCLKCIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEDKEE 318

Query: 364 KQEIVDSYKSKLRSIDCKHFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQR 423
           KQ+++  YK  + +  C++F+ G G CPFG++CFYKH    G    +   P P   R Q 
Sbjct: 319 KQQLIQKYKDGMGTKPCRYFDEGRGTCPFGANCFYKHAFPDG----RLEEPQP--QRRQN 378

Query: 424 TPPSRSNIVDMDAFFDMFEDLEDLD-FSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEE 466
               R+        +D+ ++ E+ D F  ED +       EM  +L+  G + +++  E+
Sbjct: 379 GSNGRNRNTRRTHLWDLLDERENSDSFDNEDEEMVRFELSEMLLMLLAAGTDDDVTDSED 424

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy Swiss-Prot
Match: Q9ERV1 (Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus OX=10090 GN=Mkrn2 PE=1 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-59
Identity = 145/423 (34.28%), Postives = 208/423 (49.17%), Query Frame = 0


Query: 64  SKRVLCKYFAHGACLKGEYCEFSHDW-TAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 123
           +K+V C+YF HG C +G  C FSHD   + PS +C YYQKG CA+G+RCRYDH K   A 
Sbjct: 3   TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKPPAAA 62

Query: 124 SSA---------SSNSQQPHVSESVSIAHTLLSSPLSPSPG----STIELAGSRISCL-- 183
             A         SS    PH S  ++   T +    S  PG     T+ L    ++ L  
Sbjct: 63  GGAVGPAPNPSPSSGLHSPHPSPDIA---TSVMRTHSNEPGKREKKTLVLRDRNLTGLAE 122

Query: 184 ----PSHVESAWSVECELP----------------SGLDDWGSRETRIISPADLPICSFS 243
               PS V +     C  P                +GLDD  +  +    P    +C ++
Sbjct: 123 DKTPPSKVNNPGG--CSDPQTSPEMKPHSYLDAIRTGLDDLEASSSYSNEP---QLCPYA 182

Query: 244 AAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEHMKAC----EKKQKHLESLKHS 303
           AAG  C  GD C ++HGD+C  C  Q LHPF  ++R+ H K C    E + +   + + S
Sbjct: 183 AAG-ECRFGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAFAFQAS 242

Query: 304 QEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRNSSSTSGMDVNSALRACP 363
           Q+  CS+C+E +L K   +ER+FG+LS C H +C+SCIR WR +        N  +++CP
Sbjct: 243 QDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFE----NPIIKSCP 302

Query: 364 ICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNFGNGNCPFGSSCFYKHLV 423
            CR +S FVIPSV W   + +K E+++++K  +    CK+F  G G CPFGS C Y+H  
Sbjct: 303 ECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAY 362

Query: 424 KPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLEDLDF-SAEDLDFEDLTP 446
             G          P +PR Q +        +    +D  E+ E     S +D+D  +L  
Sbjct: 363 PDGRLA------EPEKPRKQLSSEGTVRFFNSVRLWDFIENRETRQVPSTDDVDVTELGD 406

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy TrEMBL
Match: A0A6J1H7L6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111460818 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 2.5e-243
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE
Sbjct: 1   MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
           SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP
Sbjct: 61  SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
           SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE
Sbjct: 121 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR
Sbjct: 181 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK
Sbjct: 241 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 300

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 422
           HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF
Sbjct: 301 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 360

Query: 423 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 361 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy TrEMBL
Match: A0A6J1H659 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111460818 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.3e-241
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 67  VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 126
           VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS
Sbjct: 5   VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 64

Query: 127 SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 186
           SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD
Sbjct: 65  SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 124

Query: 187 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 246
           DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH
Sbjct: 125 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 184

Query: 247 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 306
           MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN
Sbjct: 185 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 244

Query: 307 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 366
           SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF
Sbjct: 245 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 304

Query: 367 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 426
           GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE
Sbjct: 305 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 364

Query: 427 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 365 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy TrEMBL
Match: A0A6J1H5V2 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111460818 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.3e-241
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 67  VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 126
           VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS
Sbjct: 3   VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 62

Query: 127 SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 186
           SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD
Sbjct: 63  SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 122

Query: 187 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 246
           DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH
Sbjct: 123 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 182

Query: 247 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 306
           MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN
Sbjct: 183 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 242

Query: 307 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 366
           SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF
Sbjct: 243 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 302

Query: 367 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 426
           GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE
Sbjct: 303 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 362

Query: 427 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 363 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 403

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy TrEMBL
Match: A0A6J1KQR4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111497821 PE=4 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 2.6e-240
Identity = 399/405 (98.52%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVK SHAE
Sbjct: 1   MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKASHAE 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
           SSASSNSQQPH+SESVSIAHTLLSSPLSPSPGSTIELAGS+ISCLPSHVESAWSVECELP
Sbjct: 61  SSASSNSQQPHMSESVSIAHTLLSSPLSPSPGSTIELAGSKISCLPSHVESAWSVECELP 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
           SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE
Sbjct: 121 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR
Sbjct: 181 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK
Sbjct: 241 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 300

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 422
           HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPP RPRSQRTPPSRSNIVDMDAFFDMF
Sbjct: 301 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPHRPRSQRTPPSRSNIVDMDAFFDMF 360

Query: 423 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           +DLEDLDFSAEDLDFE+LTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 361 QDLEDLDFSAEDLDFEELTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. ExPASy TrEMBL
Match: A0A6J1KSE8 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111497821 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.4e-238
Identity = 395/401 (98.50%), Postives = 399/401 (99.50%), Query Frame = 0


Query: 67  VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 126
           VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVK SHAESSAS
Sbjct: 20  VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKASHAESSAS 79

Query: 127 SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 186
           SNSQQPH+SESVSIAHTLLSSPLSPSPGSTIELAGS+ISCLPSHVESAWSVECELPSGLD
Sbjct: 80  SNSQQPHMSESVSIAHTLLSSPLSPSPGSTIELAGSKISCLPSHVESAWSVECELPSGLD 139

Query: 187 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 246
           DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH
Sbjct: 140 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 199

Query: 247 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 306
           MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN
Sbjct: 200 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 259

Query: 307 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 366
           SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF
Sbjct: 260 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 319

Query: 367 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 426
           GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPP RPRSQRTPPSRSNIVDMDAFFDMF+DLE
Sbjct: 320 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPHRPRSQRTPPSRSNIVDMDAFFDMFQDLE 379

Query: 427 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           DLDFSAEDLDFE+LTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 380 DLDFSAEDLDFEELTPLEMAFVLMQLGCEANLSSDEENYSF 420

[Close]

BLAST of CmoCh08G005270.1 vs. NCBI nr
Match: XP_022959900.1 (E3 ubiquitin-protein ligase makorin-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 850.9 bits (2197), Expect = 5.2e-243
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE
Sbjct: 1   MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
           SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP
Sbjct: 61  SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
           SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE
Sbjct: 121 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR
Sbjct: 181 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK
Sbjct: 241 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 300

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 422
           HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF
Sbjct: 301 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 360

Query: 423 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 361 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. NCBI nr
Match: XP_023514215.1 (E3 ubiquitin-protein ligase makorin-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 846.7 bits (2186), Expect = 9.8e-242
Identity = 403/405 (99.51%), Postives = 404/405 (99.75%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE
Sbjct: 1   MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
           SSASSNSQQPHVSESVSIAHTLLSSPLSPSP STIELAGS+ISCLPSHVESAWSVECELP
Sbjct: 61  SSASSNSQQPHVSESVSIAHTLLSSPLSPSPESTIELAGSKISCLPSHVESAWSVECELP 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
           SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE
Sbjct: 121 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR
Sbjct: 181 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK
Sbjct: 241 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 300

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 422
           HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF
Sbjct: 301 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 360

Query: 423 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 361 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. NCBI nr
Match: XP_022959901.1 (E3 ubiquitin-protein ligase makorin-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 67  VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 126
           VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS
Sbjct: 5   VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 64

Query: 127 SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 186
           SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD
Sbjct: 65  SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 124

Query: 187 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 246
           DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH
Sbjct: 125 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 184

Query: 247 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 306
           MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN
Sbjct: 185 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 244

Query: 307 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 366
           SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF
Sbjct: 245 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 304

Query: 367 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 426
           GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE
Sbjct: 305 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 364

Query: 427 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 365 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. NCBI nr
Match: XP_022959902.1 (E3 ubiquitin-protein ligase makorin-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 67  VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 126
           VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS
Sbjct: 3   VLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAESSAS 62

Query: 127 SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 186
           SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD
Sbjct: 63  SNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELPSGLD 122

Query: 187 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 246
           DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH
Sbjct: 123 DWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEH 182

Query: 247 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 306
           MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN
Sbjct: 183 MKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRN 242

Query: 307 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 366
           SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF
Sbjct: 243 SSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNF 302

Query: 367 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 426
           GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE
Sbjct: 303 GNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMFEDLE 362

Query: 427 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 363 DLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 403

[Close]

BLAST of CmoCh08G005270.1 vs. NCBI nr
Match: XP_023004552.1 (E3 ubiquitin-protein ligase makorin-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 840.9 bits (2171), Expect = 5.4e-240
Identity = 399/405 (98.52%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVK SHAE
Sbjct: 1   MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKASHAE 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
           SSASSNSQQPH+SESVSIAHTLLSSPLSPSPGSTIELAGS+ISCLPSHVESAWSVECELP
Sbjct: 61  SSASSNSQQPHMSESVSIAHTLLSSPLSPSPGSTIELAGSKISCLPSHVESAWSVECELP 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
           SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE
Sbjct: 121 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR
Sbjct: 181 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK
Sbjct: 241 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 300

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPPRPRSQRTPPSRSNIVDMDAFFDMF 422
           HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPP RPRSQRTPPSRSNIVDMDAFFDMF
Sbjct: 301 HFNFGNGNCPFGSSCFYKHLVKPGSYTWKYHRPPPHRPRSQRTPPSRSNIVDMDAFFDMF 360

Query: 423 EDLEDLDFSAEDLDFEDLTPLEMAFVLMQLGCEANLSSDEENYSF 468
           +DLEDLDFSAEDLDFE+LTPLEMAFVLMQLGCEANLSSDEENYSF
Sbjct: 361 QDLEDLDFSAEDLDFEELTPLEMAFVLMQLGCEANLSSDEENYSF 405

[Close]

BLAST of CmoCh08G005270.1 vs. TAIR 10
Match: AT3G08505.2 (zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-113
Identity = 197/324 (60.80%), Postives = 234/324 (72.22%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MS R+LCK+F HG+CLKGE CEFSHD   PP+NVCT+YQK  C +GSRCRYDHV+     
Sbjct: 1   MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR----- 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
             A+SN      SES       L   +S +P   ++  G       +  + + +V C   
Sbjct: 61  --AASNLPLSSDSES-------LDRSISTTPSRHLQQQGDN-----NDGDKSSNVYC--- 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
                        I P + PICSF+AAG +CPRG+ CPH+HGDLC TCGK+CLHPFR +E
Sbjct: 121 -------------IHPREYPICSFAAAG-DCPRGNQCPHMHGDLCNTCGKKCLHPFRPEE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEH K CEKKQKH+E+LK SQ+IECSVCL+R+LSK    ERKFGLL+ECDHPFCI CIR
Sbjct: 181 REEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWR+S+  SGMDVNS LRACPICRKLSYFV+PSV+WYSS EEK+EI+D YK+KLRSIDCK
Sbjct: 241 NWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCK 288

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPG 387
           HFNFGNGNCPFG+SCFYKH    G
Sbjct: 301 HFNFGNGNCPFGASCFYKHAYSDG 288

[Close]

BLAST of CmoCh08G005270.1 vs. TAIR 10
Match: AT3G08505.1 (zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-113
Identity = 197/324 (60.80%), Postives = 234/324 (72.22%), Query Frame = 0


Query: 63  MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKVSHAE 122
           MS R+LCK+F HG+CLKGE CEFSHD   PP+NVCT+YQK  C +GSRCRYDHV+     
Sbjct: 1   MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR----- 60

Query: 123 SSASSNSQQPHVSESVSIAHTLLSSPLSPSPGSTIELAGSRISCLPSHVESAWSVECELP 182
             A+SN      SES       L   +S +P   ++  G       +  + + +V C   
Sbjct: 61  --AASNLPLSSDSES-------LDRSISTTPSRHLQQQGDN-----NDGDKSSNVYC--- 120

Query: 183 SGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDE 242
                        I P + PICSF+AAG +CPRG+ CPH+HGDLC TCGK+CLHPFR +E
Sbjct: 121 -------------IHPREYPICSFAAAG-DCPRGNQCPHMHGDLCNTCGKKCLHPFRPEE 180

Query: 243 REEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIR 302
           REEH K CEKKQKH+E+LK SQ+IECSVCL+R+LSK    ERKFGLL+ECDHPFCI CIR
Sbjct: 181 REEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIR 240

Query: 303 NWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCK 362
           NWR+S+  SGMDVNS LRACPICRKLSYFV+PSV+WYSS EEK+EI+D YK+KLRSIDCK
Sbjct: 241 NWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCK 288

Query: 363 HFNFGNGNCPFGSSCFYKHLVKPG 387
           HFNFGNGNCPFG+SCFYKH    G
Sbjct: 301 HFNFGNGNCPFGASCFYKHAYSDG 288

The following BLAST results are available for this feature:

BLAST of CmoCh08G005270.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E0X9N4	5.8e-120	63.69	Putative RING-type E3 ubiquitin transferase C3H69 OS=Arabidopsis thaliana OX=370...	[more]
Q5ZA07	2.1e-117	63.17	E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q6IDS6	3.4e-112	60.80	E3 ubiquitin-protein ligase makorin OS=Arabidopsis thaliana OX=3702 GN=MKRN PE=2...	[more]
Q4VBT5	2.1e-61	33.65	Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 P...	[more]
Q9ERV1	1.5e-59	34.28	Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus OX=10090 GN=Mkrn2...	[more]

BLAST of CmoCh08G005270.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7L6	2.5e-243	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111460818...	[more]
A0A6J1H659	5.3e-241	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111460818...	[more]
A0A6J1H5V2	5.3e-241	100.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111460818...	[more]
A0A6J1KQR4	2.6e-240	98.52	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111497821 P...	[more]
A0A6J1KSE8	5.4e-238	98.50	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111497821 P...	[more]

BLAST of CmoCh08G005270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959900.1	5.2e-243	100.00	E3 ubiquitin-protein ligase makorin-like isoform X1 [Cucurbita moschata]	[more]
XP_023514215.1	9.8e-242	99.51	E3 ubiquitin-protein ligase makorin-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022959901.1	1.1e-240	100.00	E3 ubiquitin-protein ligase makorin-like isoform X2 [Cucurbita moschata]	[more]
XP_022959902.1	1.1e-240	100.00	E3 ubiquitin-protein ligase makorin-like isoform X3 [Cucurbita moschata]	[more]
XP_023004552.1	5.4e-240	98.52	E3 ubiquitin-protein ligase makorin-like isoform X2 [Cucurbita maxima]	[more]

BLAST of CmoCh08G005270.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08505.2	2.4e-113	60.80	zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT3G08505.1	2.4e-113	60.80	zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 355..383 e-value: 0.36 score: 19.8 coord: 63..89 e-value: 5.7E-5 score: 32.5 coord: 91..117 e-value: 0.0013 score: 28.0 coord: 199..225 e-value: 0.0033 score: 26.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 355..384 score: 13.638232
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 198..226 score: 12.436428
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 63..90 score: 13.685178
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 91..118 score: 15.112321
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 268..325 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 268..326 score: 12.371254
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 239..331 e-value: 5.2E-10 score: 40.5
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 268..325 e-value: 2.2E-7 score: 30.7
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 96..115 e-value: 3.5E-7 score: 29.8
None	No IPR available	GENE3D	1.20.120.1350		coord: 59..94 e-value: 4.3E-7 score: 31.4
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 69..87 e-value: 0.15 score: 12.7 coord: 360..381 e-value: 0.012 score: 16.2 coord: 203..223 e-value: 3.0 score: 8.5
None	No IPR available	GENE3D	3.30.1370.210		coord: 95..140 e-value: 1.7E-5 score: 26.8
None	No IPR available	PANTHER	PTHR11224:SF52	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 69-LIKE	coord: 63..386
None	No IPR available	CDD	cd16521	RING-HC_MKRN	coord: 268..326 e-value: 2.22013E-17 score: 73.8902
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 256..332
IPR045072	MKRN-like	PANTHER	PTHR11224	MAKORIN-RELATED	coord: 63..386
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 292..301
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 65..88
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 94..115

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh08G005270	CmoCh08G005270	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005270.1:exon:7167	CmoCh08G005270.1:exon:7167	exon
CmoCh08G005270.1:exon:7168	CmoCh08G005270.1:exon:7168	exon
CmoCh08G005270.1:exon:7169	CmoCh08G005270.1:exon:7169	exon
CmoCh08G005270.1:exon:7170	CmoCh08G005270.1:exon:7170	exon
CmoCh08G005270.1:exon:7171	CmoCh08G005270.1:exon:7171	exon
CmoCh08G005270.1:exon:7172	CmoCh08G005270.1:exon:7172	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005270.1:cds	CmoCh08G005270.1:cds	CDS
CmoCh08G005270.1:cds	CmoCh08G005270.1:cds_2	CDS
CmoCh08G005270.1:cds	CmoCh08G005270.1:cds_3	CDS
CmoCh08G005270.1:cds	CmoCh08G005270.1:cds_4	CDS
CmoCh08G005270.1:cds	CmoCh08G005270.1:cds_5	CDS
CmoCh08G005270.1:cds	CmoCh08G005270.1:cds_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh08G005270.1	CmoCh08G005270.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003677	DNA binding