CmoCh02G007230.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAAATTTTGCAGTGCTTCTGATCTTAAAAATTTTGGATCTTTTCCTGCCATTCTTATTTTCGGTGATTCTACAGTAGATACGGGAAATAACAACTTCATTCCCACCATTACAGAAGCTAATTACTCTCCTTATGGCAAAGATTTTCCCGGTCATATTGCTACTGGAAGGTTCAGTCATGGAAAATTCATTCCTGACATGGTGGCCTCTAAGTTGGGCATAAAGGAGCTTGTTCTTCCATTTTTGGATCCAAAATTGTCAAATGATGACGCGAAAACAGGAGTTAGTTTTGCATCAAGGGTTTGATGATCTAACTACTATGATATCCGAAGTTATTCTTATGATGAAGCAAATTGATATGTCCAAGAACTATATTCAAAGACTTACGAGGATTGTAGGTGTAGATGAAAGTAAGAAGATTATTGGTAGTGCTTTAGTTATTCTTAGTGTAGGAACTAATGACTTTACCAAAAATTTCTACGACCTTGCGGTAAGGAAACTACAATACAATATTAGTGGTTACCAAGATTTCATCCAAGATAGACTACAAAACTTCATCAAGGTAAATTAAACCATATGCACGCTATTAACCCTAATCAATATTTTATCGCATAATAATCCAAATTCATTCACATAAGCTTATGAACTCTAACATACTAAACAGGAAATTTACGAGCTTGGATGTCGCAATATAGTGGTTGCTGGCCTCCCTCTTATTGGTTGTCTTCCCATTCAAGAGACTATATCGTTTCAACCTTCTCTAAAACGAATATGTTTGGAAGATCAAAACTCGGACTCCATATCCTATAATCAGAAGCTTTCAAAGTTGTTGGGCAATCTATAATCGCAACTACATGGAAGCACAATATTGAACGCTGACATTTACACCCCTCTCATCGACATGGTCAATAATCCTCCCAAGTATGGTAAGTCGGTGTCCATCAAAATAGAAACCTTTATCAACTTATATGATCTAACGTCGTAAATATTTTAGAGAAATCAAGTTCTAAGAATCATTTTCAACTAAGTTTTGCTTGGGGCTTTTGGTCGCACAGGTTTTGAGCATGCGAACACAAGTTGTTGTGGAACTGAATTGGCAGAAGTAGCGCCTCTATGTAATGTATTAACCCCAATATGATGGATACCTATTTTGGGATAGCGTCCATCCACCAAAGCAGCTTACAAATTCATGACTGAATTATTTCTCAAGCAATTTCTTTAATCACCTAAATCAAAATTTAATTGTTTATGGGAAATCAAAGTTTGAGAACCATTTTCAACTCATTTTTGGTTTGGGCATTTGTTGAAGAGGTTTTGAGCATATAGAGAAAGGTTGTTGTGGAATTGGATTAGTGGAAGCGGAGCCTCTATGTAATGTAATTATCCCAACGTGTAAAGATCCATCAAAATTTATGTCCTAG ATGAGCAAATTTTGCAGTGCTTCTGATCTTAAAAATTTTGGATCTTTTCCTGCCATTCTTATTTTCGGTGATTCTACAGTAGATACGGGAAATAACAACTTCATTCCCACCATTACAGAAGCTAATTACTCTCCTTATGGCAAAGATTTTCCCGGTCATATTGCTACTGGAAGGTTCAGTCATGGAAAATTCATTCCTGACATGGTGGCCTCTAAGTTGGGCATAAAGGAGCTTGTTCTTCCATTTTTGGATCCAAAATTGTCAAATGATGACGCGAAAACAGGAGTTAGTTTTGCATCAAGGGAACTAATGACTTTACCAAAAATTTCTACGACCTTGCGAGGTTTTGAGCATATAGAGAAAGGTTGTTGTGGAATTGGATTAGTGGAAGCGGAGCCTCTATGTAATGTAATTATCCCAACGTGTAAAGATCCATCAAAATTTATGTCCTAG ATGAGCAAATTTTGCAGTGCTTCTGATCTTAAAAATTTTGGATCTTTTCCTGCCATTCTTATTTTCGGTGATTCTACAGTAGATACGGGAAATAACAACTTCATTCCCACCATTACAGAAGCTAATTACTCTCCTTATGGCAAAGATTTTCCCGGTCATATTGCTACTGGAAGGTTCAGTCATGGAAAATTCATTCCTGACATGGTGGCCTCTAAGTTGGGCATAAAGGAGCTTGTTCTTCCATTTTTGGATCCAAAATTGTCAAATGATGACGCGAAAACAGGAGTTAGTTTTGCATCAAGGGAACTAATGACTTTACCAAAAATTTCTACGACCTTGCGAGGTTTTGAGCATATAGAGAAAGGTTGTTGTGGAATTGGATTAGTGGAAGCGGAGCCTCTATGTAATGTAATTATCCCAACGTGTAAAGATCCATCAAAATTTATGTCCTAG MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASRELMTLPKISTTLRGFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFMS Homology
BLAST of CmoCh02G007230.1 vs. ExPASy Swiss-Prot
Match: Q9LMJ3 (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana OX=3702 GN=At1g06990 PE=2 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28 Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy Swiss-Prot
Match: O22927 (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana OX=3702 GN=At2g30310 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25 Identity = 66/134 (49.25%), Postives = 78/134 (58.21%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy Swiss-Prot
Match: Q9SIQ3 (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana OX=3702 GN=At2g31540 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.5e-24 Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 0
HSP 2 Score: 44.7 bits (104), Expect = 1.1e-03 Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy Swiss-Prot
Match: Q9SIQ2 (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana OX=3702 GN=At2g31550 PE=3 SV=3) HSP 1 Score: 111.3 bits (277), Expect = 9.5e-24 Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 0
HSP 2 Score: 45.8 bits (107), Expect = 4.9e-04 Identity = 16/35 (45.71%), Postives = 24/35 (68.57%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy Swiss-Prot
Match: O22918 (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana OX=3702 GN=At2g30220 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy TrEMBL
Match: A0A6J1G7X7 (GDSL esterase/lipase At1g06990-like OS=Cucurbita moschata OX=3662 GN=LOC111451561 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51 Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy TrEMBL
Match: A0A6J1G7I3 (GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC111451569 PE=3 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.3e-44 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy TrEMBL
Match: A0A6J1G7I3 (GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC111451569 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.6e-05 Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0
HSP 2 Score: 186.0 bits (471), Expect = 1.1e-43 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy TrEMBL
Match: A0A6J1G800 (GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC111451573 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 5.4e-06 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
HSP 2 Score: 183.3 bits (464), Expect = 7.3e-43 Identity = 89/100 (89.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. ExPASy TrEMBL
Match: A0A6J1KYS8 (GDSL esterase/lipase At2g30310-like OS=Cucurbita maxima OX=3661 GN=LOC111499474 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.6e-05 Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0
HSP 2 Score: 183.3 bits (464), Expect = 7.3e-43 Identity = 89/100 (89.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. NCBI nr
Match: XP_022947805.1 (GDSL esterase/lipase At1g06990-like [Cucurbita moschata]) HSP 1 Score: 211.1 bits (536), Expect = 6.7e-51 Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. NCBI nr
Match: XP_022947811.1 (GDSL esterase/lipase At2g30310-like [Cucurbita moschata]) HSP 1 Score: 189.1 bits (479), Expect = 2.7e-44 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. NCBI nr
Match: XP_022947811.1 (GDSL esterase/lipase At2g30310-like [Cucurbita moschata]) HSP 1 Score: 57.8 bits (138), Expect = 9.5e-05 Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0
HSP 2 Score: 186.0 bits (471), Expect = 2.3e-43 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. NCBI nr
Match: XP_022947814.1 (GDSL esterase/lipase At2g30310-like [Cucurbita moschata]) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
HSP 2 Score: 185.3 bits (469), Expect = 4.0e-43 Identity = 89/99 (89.90%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. NCBI nr
Match: XP_023521410.1 (GDSL esterase/lipase At2g30310-like [Cucurbita pepo subsp. pepo] >XP_023521412.1 GDSL esterase/lipase At2g30310-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 57.8 bits (138), Expect = 9.5e-05 Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0
HSP 2 Score: 185.3 bits (469), Expect = 4.0e-43 Identity = 89/99 (89.90%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. TAIR 10
Match: AT1G06990.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29 Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. TAIR 10
Match: AT2G30310.1 (GDSL-like Lipase/Acylhydrolase family protein ) HSP 1 Score: 117.5 bits (293), Expect = 9.4e-27 Identity = 66/134 (49.25%), Postives = 78/134 (58.21%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. TAIR 10
Match: AT2G31540.1 (GDSL-like Lipase/Acylhydrolase superfamily protein ) HSP 1 Score: 111.3 bits (277), Expect = 6.8e-25 Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 0
HSP 2 Score: 44.7 bits (104), Expect = 7.8e-05 Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. TAIR 10
Match: AT2G30220.1 (GDSL-like Lipase/Acylhydrolase family protein ) HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of CmoCh02G007230.1 vs. TAIR 10
Match: AT2G24560.1 (GDSL-like Lipase/Acylhydrolase family protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0
HSP 2 Score: 44.3 bits (103), Expect = 1.0e-04 Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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