CmoCh02G007230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G007230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GDSL esterase/lipase
Location	Cmo_Chr02: 4555039 .. 4556462 (+)
RNA-Seq Expression	CmoCh02G007230
Synteny	CmoCh02G007230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAATTTTGCAGTGCTTCTGATCTTAAAAATTTTGGATCTTTTCCTGCCATTCTTATTTTCGGTGATTCTACAGTAGATACGGGAAATAACAACTTCATTCCCACCATTACAGAAGCTAATTACTCTCCTTATGGCAAAGATTTTCCCGGTCATATTGCTACTGGAAGGTTCAGTCATGGAAAATTCATTCCTGACATGGTGGCCTCTAAGTTGGGCATAAAGGAGCTTGTTCTTCCATTTTTGGATCCAAAATTGTCAAATGATGACGCGAAAACAGGAGTTAGTTTTGCATCAAGGGTTTGATGATCTAACTACTATGATATCCGAAGTTATTCTTATGATGAAGCAAATTGATATGTCCAAGAACTATATTCAAAGACTTACGAGGATTGTAGGTGTAGATGAAAGTAAGAAGATTATTGGTAGTGCTTTAGTTATTCTTAGTGTAGGAACTAATGACTTTACCAAAAATTTCTACGACCTTGCGGTAAGGAAACTACAATACAATATTAGTGGTTACCAAGATTTCATCCAAGATAGACTACAAAACTTCATCAAGGTAAATTAAACCATATGCACGCTATTAACCCTAATCAATATTTTATCGCATAATAATCCAAATTCATTCACATAAGCTTATGAACTCTAACATACTAAACAGGAAATTTACGAGCTTGGATGTCGCAATATAGTGGTTGCTGGCCTCCCTCTTATTGGTTGTCTTCCCATTCAAGAGACTATATCGTTTCAACCTTCTCTAAAACGAATATGTTTGGAAGATCAAAACTCGGACTCCATATCCTATAATCAGAAGCTTTCAAAGTTGTTGGGCAATCTATAATCGCAACTACATGGAAGCACAATATTGAACGCTGACATTTACACCCCTCTCATCGACATGGTCAATAATCCTCCCAAGTATGGTAAGTCGGTGTCCATCAAAATAGAAACCTTTATCAACTTATATGATCTAACGTCGTAAATATTTTAGAGAAATCAAGTTCTAAGAATCATTTTCAACTAAGTTTTGCTTGGGGCTTTTGGTCGCACAGGTTTTGAGCATGCGAACACAAGTTGTTGTGGAACTGAATTGGCAGAAGTAGCGCCTCTATGTAATGTATTAACCCCAATATGATGGATACCTATTTTGGGATAGCGTCCATCCACCAAAGCAGCTTACAAATTCATGACTGAATTATTTCTCAAGCAATTTCTTTAATCACCTAAATCAAAATTTAATTGTTTATGGGAAATCAAAGTTTGAGAACCATTTTCAACTCATTTTTGGTTTGGGCATTTGTTGAAGAGGTTTTGAGCATATAGAGAAAGGTTGTTGTGGAATTGGATTAGTGGAAGCGGAGCCTCTATGTAATGTAATTATCCCAACGTGTAAAGATCCATCAAAATTTATGTCCTAG

mRNA sequence

ATGAGCAAATTTTGCAGTGCTTCTGATCTTAAAAATTTTGGATCTTTTCCTGCCATTCTTATTTTCGGTGATTCTACAGTAGATACGGGAAATAACAACTTCATTCCCACCATTACAGAAGCTAATTACTCTCCTTATGGCAAAGATTTTCCCGGTCATATTGCTACTGGAAGGTTCAGTCATGGAAAATTCATTCCTGACATGGTGGCCTCTAAGTTGGGCATAAAGGAGCTTGTTCTTCCATTTTTGGATCCAAAATTGTCAAATGATGACGCGAAAACAGGAGTTAGTTTTGCATCAAGGGAACTAATGACTTTACCAAAAATTTCTACGACCTTGCGAGGTTTTGAGCATATAGAGAAAGGTTGTTGTGGAATTGGATTAGTGGAAGCGGAGCCTCTATGTAATGTAATTATCCCAACGTGTAAAGATCCATCAAAATTTATGTCCTAG

Coding sequence (CDS)

ATGAGCAAATTTTGCAGTGCTTCTGATCTTAAAAATTTTGGATCTTTTCCTGCCATTCTTATTTTCGGTGATTCTACAGTAGATACGGGAAATAACAACTTCATTCCCACCATTACAGAAGCTAATTACTCTCCTTATGGCAAAGATTTTCCCGGTCATATTGCTACTGGAAGGTTCAGTCATGGAAAATTCATTCCTGACATGGTGGCCTCTAAGTTGGGCATAAAGGAGCTTGTTCTTCCATTTTTGGATCCAAAATTGTCAAATGATGACGCGAAAACAGGAGTTAGTTTTGCATCAAGGGAACTAATGACTTTACCAAAAATTTCTACGACCTTGCGAGGTTTTGAGCATATAGAGAAAGGTTGTTGTGGAATTGGATTAGTGGAAGCGGAGCCTCTATGTAATGTAATTATCCCAACGTGTAAAGATCCATCAAAATTTATGTCCTAG

Protein sequence

MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASRELMTLPKISTTLRGFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFMS

Homology

[Close]

BLAST of CmoCh02G007230 vs. ExPASy Swiss-Prot
Match: Q9LMJ3 (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana OX=3702 GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 12  NFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVAS 71
           N   FPAIL+FGDST+DTGNNN+I T   AN+ PYG +FPGH ATGRFS+GK IPD +AS
Sbjct: 31  NVSMFPAILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIAS 90

Query: 72  KLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
            +GIK+ V PFLDP LS+ D  TGV FAS
Sbjct: 91  LMGIKDTVPPFLDPHLSDSDIITGVCFAS 119

[Close]

BLAST of CmoCh02G007230 vs. ExPASy Swiss-Prot
Match: O22927 (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana OX=3702 GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 66/134 (49.25%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 16  FPAILIFGDSTVDTGNNNF-IPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLG 75
           FPAILIFGDSTVDTGNNN+   TI +A + PYG D PGH A GR+S+GK I D++ASKL 
Sbjct: 32  FPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLN 91

Query: 76  IKELVLPFLDPKLSNDDAKTGVSFASRELMTLPKISTTLRGFEHIEKGCCGIGLVEAEPL 135
           IKELV PFL P +S+ D  TGVSFAS                        G G  +   L
Sbjct: 92  IKELVPPFLQPNISHQDIVTGVSFAS-----------------------AGAGYDDRSSL 142

Query: 136 CNVIIPTCKDPSKF 149
            +  IP  + PS F
Sbjct: 152 SSKAIPVSQQPSMF 142

[Close]

BLAST of CmoCh02G007230 vs. ExPASy Swiss-Prot
Match: Q9SIQ3 (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana OX=3702 GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.5e-24
Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 16  FPAILIFGDSTVDTGNNNF-IPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLG 75
           FPAILIFGDSTVDTGNNN+ +PTI  A + PYG D P   A GRFS+GK I D++A+KL 
Sbjct: 33  FPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLN 92

Query: 76  IKELVLPFLDPKLSNDDAKTGVSFAS 101
           IKE + PFL P LS+ D  TGV FAS
Sbjct: 93  IKEFIPPFLQPNLSDQDILTGVCFAS 118

HSP 2 Score: 44.7 bits (104), Expect = 1.1e-03
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GF+  ++GCCG G +E   +CNV  P C++ S+F+
Sbjct: 297 GFKETKRGCCGTGFLETSFMCNVFSPVCQNRSEFL 331

[Close]

BLAST of CmoCh02G007230 vs. ExPASy Swiss-Prot
Match: Q9SIQ2 (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana OX=3702 GN=At2g31550 PE=3 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 9.5e-24
Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 16  FPAILIFGDSTVDTGNNNF-IPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLG 75
           FPAILIFGDSTVDTGNNN+ +PTI  A + PYG D P   A GRFS+GK I D++A+KL 
Sbjct: 33  FPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLN 92

Query: 76  IKELVLPFLDPKLSNDDAKTGVSFAS 101
           IKE + PFL P LS+ D  TGV FAS
Sbjct: 93  IKEFIPPFLQPNLSDQDILTGVCFAS 118

HSP 2 Score: 45.8 bits (107), Expect = 4.9e-04
Identity = 16/35 (45.71%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GF+  ++GCCG G +E   +CNV  P C++ S+FM
Sbjct: 297 GFKETKRGCCGTGFLETSFMCNVFSPVCQNRSEFM 331

[Close]

BLAST of CmoCh02G007230 vs. ExPASy Swiss-Prot
Match: O22918 (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana OX=3702 GN=At2g30220 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 5   CSASDLKNFGSFPAILIFGDSTVDTGNNNFI-PTITEANYSPYGKDFPGHIATGRFSHGK 64
           C+A        FPAILIFGDST DTGNNN+    + +AN+ PYG D PGH A GRFS+GK
Sbjct: 20  CNADANTTQPLFPAILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGK 79

Query: 65  FIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
            I D++++KL IKE V PFL P +S+ D  TGV FAS
Sbjct: 80  LISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFAS 116

[Close]

BLAST of CmoCh02G007230 vs. ExPASy TrEMBL
Match: A0A6J1G7X7 (GDSL esterase/lipase At1g06990-like OS=Cucurbita moschata OX=3662 GN=LOC111451561 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS
Sbjct: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASREL 104
           HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASR++
Sbjct: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASRQI 103

[Close]

BLAST of CmoCh02G007230 vs. ExPASy TrEMBL
Match: A0A6J1G7I3 (GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC111451569 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.3e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           MSK CSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTIT+ANYSPYGKDF GHIATGRFS
Sbjct: 21  MSKLCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITKANYSPYGKDFSGHIATGRFS 80

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           +GK IPDMVAS+LGIKELV PFLDPKLSNDD KTGV+FAS
Sbjct: 81  NGKLIPDMVASRLGIKELVPPFLDPKLSNDDVKTGVNFAS 120

[Close]

BLAST of CmoCh02G007230 vs. ExPASy TrEMBL
Match: A0A6J1G7I3 (GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC111451569 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.6e-05
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GFEH   GCCG GL E  PLCN + PTC+D SK++
Sbjct: 299 GFEHTNTGCCGTGLAEVAPLCNALTPTCEDSSKYL 333

HSP 2 Score: 186.0 bits (471), Expect = 1.1e-43
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           MSK CSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTI +ANYSPYGKDFP HIATGRFS
Sbjct: 21  MSKLCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTIIKANYSPYGKDFPDHIATGRFS 80

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           +GK IPDM+AS+LGIKELV PFLDPKLSNDD KTGV+FAS
Sbjct: 81  NGKLIPDMMASRLGIKELVPPFLDPKLSNDDVKTGVNFAS 120

[Close]

BLAST of CmoCh02G007230 vs. ExPASy TrEMBL
Match: A0A6J1G800 (GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC111451573 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.4e-06
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GFEH   GCCG GL E  PLCN + PTC+DPSK++
Sbjct: 299 GFEHTNTGCCGTGLAEVAPLCNALTPTCEDPSKYL 333

HSP 2 Score: 183.3 bits (464), Expect = 7.3e-43
Identity = 89/100 (89.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           M K CSASDLKNF SFPAILIFGDSTVDTGNNNFIPTI +ANYSPYGKDFP HIATGRFS
Sbjct: 21  MIKLCSASDLKNFRSFPAILIFGDSTVDTGNNNFIPTIIKANYSPYGKDFPNHIATGRFS 80

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           +GK IPDMVAS+LGIKELV PFLDPKLSNDD KTGVSFAS
Sbjct: 81  NGKLIPDMVASRLGIKELVPPFLDPKLSNDDVKTGVSFAS 120

[Close]

BLAST of CmoCh02G007230 vs. ExPASy TrEMBL
Match: A0A6J1KYS8 (GDSL esterase/lipase At2g30310-like OS=Cucurbita maxima OX=3661 GN=LOC111499474 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.6e-05
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GFEH   GCCG GL E  PLCN + PTC+D SK++
Sbjct: 299 GFEHTNTGCCGTGLAEVAPLCNALTPTCEDSSKYL 333

HSP 2 Score: 183.3 bits (464), Expect = 7.3e-43
Identity = 89/100 (89.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           M K CSASDLKNF SFPAILIFGDSTVDTGNNNFIPTI +ANYSPYGKDFP HIATGRFS
Sbjct: 21  MIKLCSASDLKNFRSFPAILIFGDSTVDTGNNNFIPTIIKANYSPYGKDFPNHIATGRFS 80

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           +GK IPDMVAS+LGIKELV PFLDPKLSNDD KTGVSFAS
Sbjct: 81  NGKLIPDMVASRLGIKELVPPFLDPKLSNDDVKTGVSFAS 120

[Close]

BLAST of CmoCh02G007230 vs. NCBI nr
Match: XP_022947805.1 (GDSL esterase/lipase At1g06990-like [Cucurbita moschata])

HSP 1 Score: 211.1 bits (536), Expect = 6.7e-51
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS
Sbjct: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASREL 104
           HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASR++
Sbjct: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFASRQI 103

[Close]

BLAST of CmoCh02G007230 vs. NCBI nr
Match: XP_022947811.1 (GDSL esterase/lipase At2g30310-like [Cucurbita moschata])

HSP 1 Score: 189.1 bits (479), Expect = 2.7e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           MSK CSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTIT+ANYSPYGKDF GHIATGRFS
Sbjct: 21  MSKLCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITKANYSPYGKDFSGHIATGRFS 80

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           +GK IPDMVAS+LGIKELV PFLDPKLSNDD KTGV+FAS
Sbjct: 81  NGKLIPDMVASRLGIKELVPPFLDPKLSNDDVKTGVNFAS 120

[Close]

BLAST of CmoCh02G007230 vs. NCBI nr
Match: XP_022947811.1 (GDSL esterase/lipase At2g30310-like [Cucurbita moschata])

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-05
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GFEH   GCCG GL E  PLCN + PTC+D SK++
Sbjct: 299 GFEHTNTGCCGTGLAEVAPLCNALTPTCEDSSKYL 333

HSP 2 Score: 186.0 bits (471), Expect = 2.3e-43
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MSKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFS 60
           MSK CSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTI +ANYSPYGKDFP HIATGRFS
Sbjct: 21  MSKLCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTIIKANYSPYGKDFPDHIATGRFS 80

Query: 61  HGKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           +GK IPDM+AS+LGIKELV PFLDPKLSNDD KTGV+FAS
Sbjct: 81  NGKLIPDMMASRLGIKELVPPFLDPKLSNDDVKTGVNFAS 120

[Close]

BLAST of CmoCh02G007230 vs. NCBI nr
Match: XP_022947814.1 (GDSL esterase/lipase At2g30310-like [Cucurbita moschata])

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GFEH   GCCG GL E  PLCN + PTC+DPSK++
Sbjct: 299 GFEHTNTGCCGTGLAEVAPLCNALTPTCEDPSKYL 333

HSP 2 Score: 185.3 bits (469), Expect = 4.0e-43
Identity = 89/99 (89.90%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 2   SKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFSH 61
           SK CSASDLK FGSFPAILIFGDSTVDTGNNNFIPTI +ANYSPYGKDFPGHIATGRFS+
Sbjct: 22  SKLCSASDLKKFGSFPAILIFGDSTVDTGNNNFIPTIIKANYSPYGKDFPGHIATGRFSN 81

Query: 62  GKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           GK IPDMVAS+LGIKELV PFLDPKLSNDD K+GVSFAS
Sbjct: 82  GKLIPDMVASRLGIKELVPPFLDPKLSNDDVKSGVSFAS 120

[Close]

BLAST of CmoCh02G007230 vs. NCBI nr
Match: XP_023521410.1 (GDSL esterase/lipase At2g30310-like [Cucurbita pepo subsp. pepo] >XP_023521412.1 GDSL esterase/lipase At2g30310-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-05
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GFEH   GCCG GL E  PLCN + PTC+D SK++
Sbjct: 299 GFEHTNTGCCGTGLAEVAPLCNALTPTCEDSSKYL 333

HSP 2 Score: 185.3 bits (469), Expect = 4.0e-43
Identity = 89/99 (89.90%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 2   SKFCSASDLKNFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFSH 61
           SK CSASDLK FGSFPAILIFGDSTVDTGNNNFIPTI +ANYSPYGKDFPGHIATGRFS+
Sbjct: 22  SKLCSASDLKKFGSFPAILIFGDSTVDTGNNNFIPTIIKANYSPYGKDFPGHIATGRFSN 81

Query: 62  GKFIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
           GK IPDMVAS+LGIKELV PFLDPKLSNDD K+GVSFAS
Sbjct: 82  GKLIPDMVASRLGIKELVPPFLDPKLSNDDVKSGVSFAS 120

[Close]

BLAST of CmoCh02G007230 vs. TAIR 10
Match: AT1G06990.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 59/89 (66.29%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 12  NFGSFPAILIFGDSTVDTGNNNFIPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVAS 71
           N   FPAIL+FGDST+DTGNNN+I T   AN+ PYG +FPGH ATGRFS+GK IPD +AS
Sbjct: 31  NVSMFPAILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIAS 90

Query: 72  KLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
            +GIK+ V PFLDP LS+ D  TGV FAS
Sbjct: 91  LMGIKDTVPPFLDPHLSDSDIITGVCFAS 119

[Close]

BLAST of CmoCh02G007230 vs. TAIR 10
Match: AT2G30310.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.4e-27
Identity = 66/134 (49.25%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 16  FPAILIFGDSTVDTGNNNF-IPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLG 75
           FPAILIFGDSTVDTGNNN+   TI +A + PYG D PGH A GR+S+GK I D++ASKL 
Sbjct: 32  FPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLN 91

Query: 76  IKELVLPFLDPKLSNDDAKTGVSFASRELMTLPKISTTLRGFEHIEKGCCGIGLVEAEPL 135
           IKELV PFL P +S+ D  TGVSFAS                        G G  +   L
Sbjct: 92  IKELVPPFLQPNISHQDIVTGVSFAS-----------------------AGAGYDDRSSL 142

Query: 136 CNVIIPTCKDPSKF 149
            +  IP  + PS F
Sbjct: 152 SSKAIPVSQQPSMF 142

[Close]

BLAST of CmoCh02G007230 vs. TAIR 10
Match: AT2G31540.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 6.8e-25
Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 16  FPAILIFGDSTVDTGNNNF-IPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLG 75
           FPAILIFGDSTVDTGNNN+ +PTI  A + PYG D P   A GRFS+GK I D++A+KL 
Sbjct: 33  FPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLN 92

Query: 76  IKELVLPFLDPKLSNDDAKTGVSFAS 101
           IKE + PFL P LS+ D  TGV FAS
Sbjct: 93  IKEFIPPFLQPNLSDQDILTGVCFAS 118

HSP 2 Score: 44.7 bits (104), Expect = 7.8e-05
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GF+  ++GCCG G +E   +CNV  P C++ S+F+
Sbjct: 297 GFKETKRGCCGTGFLETSFMCNVFSPVCQNRSEFL 331

[Close]

BLAST of CmoCh02G007230 vs. TAIR 10
Match: AT2G30220.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 5   CSASDLKNFGSFPAILIFGDSTVDTGNNNFI-PTITEANYSPYGKDFPGHIATGRFSHGK 64
           C+A        FPAILIFGDST DTGNNN+    + +AN+ PYG D PGH A GRFS+GK
Sbjct: 20  CNADANTTQPLFPAILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGK 79

Query: 65  FIPDMVASKLGIKELVLPFLDPKLSNDDAKTGVSFAS 101
            I D++++KL IKE V PFL P +S+ D  TGV FAS
Sbjct: 80  LISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFAS 116

[Close]

BLAST of CmoCh02G007230 vs. TAIR 10
Match: AT2G24560.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 16  FPAILIFGDSTVDTGNNNF-IPTITEANYSPYGKDFPGHIATGRFSHGKFIPDMVASKLG 75
           FPAILIFGDSTVDTGNNN+   TI +A + PYG D P H A+GRF++GK   D++A+KL 
Sbjct: 32  FPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGIDLPNHKASGRFTNGKIFSDIIATKLN 91

Query: 76  IKELVLPFLDPKLSNDDAKTGVSFAS 101
           IK+ V PFL P LS+ +  TGV FAS
Sbjct: 92  IKQFVPPFLQPNLSDQEIVTGVCFAS 117

HSP 2 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 115 GFEHIEKGCCGIGLVEAEPLCNVIIPTCKDPSKFM 150
           GF+  ++GCCG G +E   +CN   PTC++ S+F+
Sbjct: 296 GFKETKRGCCGTGHLETSFMCNAFSPTCRNHSEFL 330

The following BLAST results are available for this feature:

BLAST of CmoCh02G007230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMJ3	2.2e-28	66.29	GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana OX=3702 GN=At1g06990 PE=2...	[more]
O22927	1.3e-25	49.25	GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana OX=3702 GN=At2g30310 PE=2...	[more]
Q9SIQ3	9.5e-24	63.95	GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana OX=3702 GN=At2g31540 PE=2...	[more]
Q9SIQ2	9.5e-24	63.95	GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana OX=3702 GN=At2g31550 PE=3...	[more]
O22918	1.6e-23	56.70	GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana OX=3702 GN=At2g30220 PE=3...	[more]

BLAST of CmoCh02G007230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7X7	3.3e-51	98.06	GDSL esterase/lipase At1g06990-like OS=Cucurbita moschata OX=3662 GN=LOC11145156...	[more]
A0A6J1G7I3	1.3e-44	91.00	GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC11145156...	[more]
A0A6J1G7I3	4.6e-05	60.00	GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC11145156...	[more]
A0A6J1G800	5.4e-06	62.86	GDSL esterase/lipase At2g30310-like OS=Cucurbita moschata OX=3662 GN=LOC11145157...	[more]
A0A6J1KYS8	4.6e-05	60.00	GDSL esterase/lipase At2g30310-like OS=Cucurbita maxima OX=3661 GN=LOC111499474 ...	[more]

Pages

BLAST of CmoCh02G007230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947805.1	6.7e-51	98.06	GDSL esterase/lipase At1g06990-like [Cucurbita moschata]	[more]
XP_022947811.1	2.7e-44	91.00	GDSL esterase/lipase At2g30310-like [Cucurbita moschata]	[more]
XP_022947811.1	9.5e-05	60.00	GDSL esterase/lipase At2g30310-like [Cucurbita moschata]	[more]
XP_022947814.1	1.1e-05	62.86	GDSL esterase/lipase At2g30310-like [Cucurbita moschata]	[more]
XP_023521410.1	9.5e-05	60.00	GDSL esterase/lipase At2g30310-like [Cucurbita pepo subsp. pepo] >XP_023521412.1...	[more]

Pages

BLAST of CmoCh02G007230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06990.1	1.6e-29	66.29	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT2G30310.1	9.4e-27	49.25	GDSL-like Lipase/Acylhydrolase family protein	[more]
AT2G31540.1	6.8e-25	63.95	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT2G30220.1	1.2e-24	56.70	GDSL-like Lipase/Acylhydrolase family protein	[more]
AT2G24560.1	2.8e-23	60.47	GDSL-like Lipase/Acylhydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001087	GDSL lipase/esterase	PFAM	PF00657	Lipase_GDSL	coord: 19..107 e-value: 1.7E-7 score: 32.0
IPR036514	SGNH hydrolase superfamily	GENE3D	3.40.50.1110	SGNH hydrolase	coord: 6..117 e-value: 3.8E-17 score: 64.7
None	No IPR available	PANTHER	PTHR45642:SF30	GDSL-LIKE LIPASE/ACYLHYDROLASE	coord: 15..100
None	No IPR available	PANTHER	PTHR45642:SF30	GDSL-LIKE LIPASE/ACYLHYDROLASE	coord: 112..149
None	No IPR available	PANTHER	PTHR45642	GDSL ESTERASE/LIPASE EXL3	coord: 15..100 coord: 112..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G007230.1	CmoCh02G007230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds