CmoCh01G004540.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004540.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MADS-box transcription factor
Location	Cmo_Chr01: 2174856 .. 2178407 (+)
Sequence length	1498
RNA-Seq Expression	CmoCh01G004540.1
Synteny	CmoCh01G004540.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCTCTAAGGCTGTCTTGAAATTGTTTTTGTGGGTGTGAAGATCAGAAGAAATCTGTAGCTCTGAAACCCTAAGAACAAGAACAAAAAAAGAGAGACTAGGGTTTAATTCTTTTTTGTTTGGGAAAAACAAAAAAACAACAACAAAAATCACTGTTTTCTGCCTCTACCTCACTAGGGTTTAATTCTTTTTTGTTCTTGTTGGATCCCAAGAACAGAGCCAGAGGCTTTGTTTTCAGGGGTAAGGAAATGGGAAGAGGAAGAGTGGAGCTGAAGAGAATAGAGAACAAGATAAACAGGCAGGTAACATTTGCCAAGAGAAGGAGTGGGCTGTTGAAGAAAGCTTATGAGCTCTCTGTTCTTTGTGATGCTGAAGTTGCTCTTATCATCTTCTCTAATCGTGGCAAGCTCTATGAGTTCTGTAGCACTTCCAAGTACTCTTCTCATCCTCATCTTTCTAGGGTTTCCTTTTCATTTTGTTTTTGTTTATACCCATTTAGATCCATAATTGCTTCTTCATCATCTCTCATTTCATGTTGTTTCTTGCCTCAGTATGCTCAAGACACTGGAAAGGTACCAGAAATGCAGTTATGGAGCTGTCGAGGTCGCCAAACCCGCCAAAGAGCTCGAGGTGAATCGTCTATGCAGACACCCATGTCGTTAATGATTAAATTTATCGTAATCTATCAACTACCTATGAATTCTCGATCGTAAAAATTGGATTTTTATTTTTTATTTTTACAGAGTAGCTATAGAGAGTACTTGAAGCTGAAGGCTAGGTTTGAGTCTCTACAAAGAACTCAGAGGTAACTAATTTTTTTTTAATTATTGATGTAAATTAACCTATGAATACATTTAAGTTTAGAATTAGGGCTTAACATTGGTTATTTATGTTATGGCAGAAATCTTCTTGGTGAGGAGTTGGGTCCATTGAACTCTAAAGAGCTTGAGCAGCTGGAGCGTCAGCTCGAGTCTTCTTTGAAGCAAGTTAGGTCTACTAAGGTAAGTTCATTAAAATTTAGCTCTAACCCATAATTTATTTCTCTTTTTAACTATGATTTTGATCGTTAATGTGAGATCCCGCCCCGAAGTGGGGTGGACACGAGCCAACAAGGACGCAGGGCTTCGAAAGGGGTGGATTGTGAGATCCCGCATCGGTTGGGGAGGAGAACGAAATACCCTTCCTTCATAAGGGTGTGGATACTCTCCCTAGCATACACGTTTTAACAACCTTGAGGAAAGCCCAAATAGAACAATATCTGTTAGCTCATACACGTTTTAACAACCTTGAGGAAAGCCCAAATAGAACAATATCTGTTAGCAGTGGGGTTGAGCATTAGATCATCAAATGGGTCTTGATTATATCAATTCTCGTTTTGATTCTCATTCTCATTCATGTTTCTAGGGTTTGTCTCGATAGAATTATCCATGTGGCTGTGCTATTGTCTGTTGGTTCTTATAAGACAACATTTGAAGCTTTACCTTTGTACTTTGGAAATGGTATCCCAGATTCTTTGCTTCTTAATTTATTTGCTACCACCAAAAGATTTAAAACTTGGCCAACTATAGCCAGCTAATTGAGTCGATTCTTTGCGGGTTGTTCATCACAATTACTATGATGATAATTATGATAGAGAGGAAATAAAGTCGATTCCTTTTGGAACTACCTCTGAATCCAAATCCATTGCATACCTTGATGGTCCAAATCCATTGCATGCCTTGATGGTACATTGACCTAATGGTTGGCGAAGCCGTATAGGTATACAAAAAGTCAGAATCCCTTAAAAAAAAACTCTTAATGTATGAAAGAACGTTCGGGCTGTTCAACAACGGGATTTATAAAATAAAAACAGAAGAACGAGACAAAAAACATGACATAAAAGGAGGCTAAGAAGAACATAGCATTAAGGAAGAGCAACTACGAGTGTATCTTTATGTCTTGGATCTATGACAAAACTTTTAATGAGTATACCTTTTGAGATCCCATATCGGTGGGAGAGAGTAACAAAACATTACTCATATGGGTGGGTGTGGAAACCTCTCCCTAACATACGTGTTTTAAAAACCTCAAGAGAACCCTAAAAGGAAAAGCTCAAATAGGACAATATGTACTAGTTGTGGGATTGAACTGTTACAAATGGTACCAGAGTTAGACATGAGGCAGTGTGCCAACAAGCACGCTGGGTCCCAAGAGAGGGTGGATTGTGAAATCCCACATTGGTTGGAGAGAAGAACAAAAACATTCCTTGTATAAGGGTGCGAAAACCTATCTCTAACAGACGCATTTTATCATCCTTGAGGAGAAGCTCAACAGAGGACAATGTCTACTAGCAATGAGCTTGGGCTGTTACATCTTATCTTAGCTCAACTCACGAGGTATTTAATTAGTTAATCATTACCAAATTCTAAATACATTTGGAACTGAGAACTTGCAGACCCAGTACATGCTGGACCAGCTATCTGATCTTCAGAACAAGGTAGGCTTGACTTGATACATCAAGTGTTAATATCCGTTGAATTTTCATGGATTCATATGCTAATTGTTGTGTTTTTTTTCAAGTTCAGGAACAAATGCTGATTGAAACCAACAGATCTCTAACATTAAAGGTAACAACCAACATACCTTTCTACAAACAGATTTGAAAAAGAAAAAAACGTCAAAAAAAGATCTAAAGACGAAATCGTTATGAACTCGAATGACTTGGATTTGGTTGGTCAGCTAGAAGAAATGAGTTCAAGAAACAACATAAGACTAACATGGGAAGAAGTAGACCAAAGCATGTCATATGCACCACAGAATGCCCAAACTCAAGGCTTCTTTCAGCCACTGGATTGCAACCCCACTCTGCAAATTGGGTCAGTTCATCCCTTTTGGCTAAGCAAATGAAATGGTTTTTTTTCCGTGGATAATCTGTGTGTTTACTTATGTGGTGTGGTGGGTTTGCAACAGATACAGTGGTTCAGTATCAGATCAAATTACAGCCACCACTGCCCCAAATCATGCCCAACAAGTCAATGCCTTTCTCCCTGGTTGGATGCTTTGAAGGCCTCAAACTCTACCTCTCTTTTTTTATTTATTATTAATTGCAGTATGCTACCAACACTTTGCAAATTTGTTAATAAGGACTTTTATTTTAGACATTATAAGAAAAACCCCCCAACATTTGGCTTCTGGACACGAAAAGAATTTTAAGGAGTAGTGTATGGAGATGAACATAACAAATTTACGTGTATCATTTCTCATCTTCTAACAATTCGGAATCTAGATTTGTGACGTCGTAATGTTATGTACTTTAAAGACTGTCTCCATAGACAAATACGAGTCATGTTTTGTCCTAACTCATATGCATCTTAGAAAAATTATCAGGAGGTCACTCGACATAGAATTACTCTCAGCAAAGCATGCTTAACCTTGGAGTTTCTATGATTAAGTCACTGAAAAGTAAGGTGCATCTTGTTGGTATACGTAGTAATTTTCAATTTTTTTTAGTCTTGTACTTATCCTCATGTATTTTCAGTTCATTTATGTATTATTTCTTTGTTTGAGTGTCAC

mRNA sequence

GAGCTCTAAGGCTGTCTTGAAATTGTTTTTGTGGGTGTGAAGATCAGAAGAAATCTGTAGCTCTGAAACCCTAAGAACAAGAACAAAAAAAGAGAGACTAGGGTTTAATTCTTTTTTGTTTGGGAAAAACAAAAAAACAACAACAAAAATCACTGTTTTCTGCCTCTACCTCACTAGGGTTTAATTCTTTTTTGTTCTTGTTGGATCCCAAGAACAGAGCCAGAGGCTTTGTTTTCAGGGGTAAGGAAATGGGAAGAGGAAGAGTGGAGCTGAAGAGAATAGAGAACAAGATAAACAGGCAGGTAACATTTGCCAAGAGAAGGAGTGGGCTGTTGAAGAAAGCTTATGAGCTCTCTGTTCTTTGTGATGCTGAAGTTGCTCTTATCATCTTCTCTAATCGTGGCAAGCTCTATGAGTTCTGTAGCACTTCCAATATGCTCAAGACACTGGAAAGGTACCAGAAATGCAGTTATGGAGCTGTCGAGGTCGCCAAACCCGCCAAAGAGCTCGAGAGTAGCTATAGAGAGTACTTGAAGCTGAAGGCTAGGTTTGAGTCTCTACAAAGAACTCAGAGAAATCTTCTTGGTGAGGAGTTGGGTCCATTGAACTCTAAAGAGCTTGAGCAGCTGGAGCGTCAGCTCGAGTCTTCTTTGAAGCAAGTTAGGTCTACTAAGACCCAGTACATGCTGGACCAGCTATCTGATCTTCAGAACAAGGAACAAATGCTGATTGAAACCAACAGATCTCTAACATTAAAGCTAGAAGAAATGAGTTCAAGAAACAACATAAGACTAACATGGGAAGAAGTAGACCAAAGCATGTCATATGCACCACAGAATGCCCAAACTCAAGGCTTCTTTCAGCCACTGGATTGCAACCCCACTCTGCAAATTGGATACAGTGGTTCAGTATCAGATCAAATTACAGCCACCACTGCCCCAAATCATGCCCAACAAGTCAATGCCTTTCTCCCTGGTTGGATGCTTTGAAGGCCTCAAACTCTACCTCTCTTTTTTTATTTATTATTAATTGCAGTATGCTACCAACACTTTGCAAATTTGTTAATAAGGACTTTTATTTTAGACATTATAAGAAAAACCCCCCAACATTTGGCTTCTGGACACGAAAAGAATTTTAAGGAGTAGTGTATGGAGATGAACATAACAAATTTACGTGTATCATTTCTCATCTTCTAACAATTCGGAATCTAGATTTGTGACGTCGTAATGTTATGTACTTTAAAGACTGTCTCCATAGACAAATACGAGTCATGTTTTGTCCTAACTCATATGCATCTTAGAAAAATTATCAGGAGGTCACTCGACATAGAATTACTCTCAGCAAAGCATGCTTAACCTTGGAGTTTCTATGATTAAGTCACTGAAAAGTAAGGTGCATCTTGTTGGTATACGTAGTAATTTTCAATTTTTTTTAGTCTTGTACTTATCCTCATGTATTTTCAGTTCATTTATGTATTATTTCTTTGTTTGAGTGTCAC

Coding sequence (CDS)

ATGGGAAGAGGAAGAGTGGAGCTGAAGAGAATAGAGAACAAGATAAACAGGCAGGTAACATTTGCCAAGAGAAGGAGTGGGCTGTTGAAGAAAGCTTATGAGCTCTCTGTTCTTTGTGATGCTGAAGTTGCTCTTATCATCTTCTCTAATCGTGGCAAGCTCTATGAGTTCTGTAGCACTTCCAATATGCTCAAGACACTGGAAAGGTACCAGAAATGCAGTTATGGAGCTGTCGAGGTCGCCAAACCCGCCAAAGAGCTCGAGAGTAGCTATAGAGAGTACTTGAAGCTGAAGGCTAGGTTTGAGTCTCTACAAAGAACTCAGAGAAATCTTCTTGGTGAGGAGTTGGGTCCATTGAACTCTAAAGAGCTTGAGCAGCTGGAGCGTCAGCTCGAGTCTTCTTTGAAGCAAGTTAGGTCTACTAAGACCCAGTACATGCTGGACCAGCTATCTGATCTTCAGAACAAGGAACAAATGCTGATTGAAACCAACAGATCTCTAACATTAAAGCTAGAAGAAATGAGTTCAAGAAACAACATAAGACTAACATGGGAAGAAGTAGACCAAAGCATGTCATATGCACCACAGAATGCCCAAACTCAAGGCTTCTTTCAGCCACTGGATTGCAACCCCACTCTGCAAATTGGATACAGTGGTTCAGTATCAGATCAAATTACAGCCACCACTGCCCCAAATCATGCCCAACAAGTCAATGCCTTTCTCCCTGGTTGGATGCTTTGA

Protein sequence

MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNIRLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAFLPGWML

Homology

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy Swiss-Prot
Match: Q8LLR2 (Agamous-like MADS-box protein MADS2 OS=Vitis vinifera OX=29760 GN=MADS2 PE=2 SV=2)

HSP 1 Score: 377.5 bits (968), Expect = 1.2e-103
Identity = 195/247 (78.95%), Postives = 229/247 (92.71%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFS RGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELE-SSYREYLKLKARFESLQRTQRNLLGEELGPL 120
           S+MLKTLERYQKCSYGAVEV++P+KELE SSYREYLKLK++FESLQRTQRNLLGE+LGPL
Sbjct: 61  SSMLKTLERYQKCSYGAVEVSRPSKELEQSSYREYLKLKSKFESLQRTQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNN 180
           N+KELEQLERQLE+SLKQVRSTKTQ+MLDQLSDLQNKEQ+L+E+N++LT KL+E+S +N+
Sbjct: 121 NTKELEQLERQLETSLKQVRSTKTQFMLDQLSDLQNKEQVLVESNKALTRKLDEISVKNH 180

Query: 181 IRLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNA 240
           ++L+WE  +QSM Y  Q AQ+QGFFQPL+CNPTLQIGY+ + S Q+   +AP++AQ VN 
Sbjct: 181 LQLSWESGEQSMPYGHQQAQSQGFFQPLECNPTLQIGYNPAGSSQL---SAPSNAQNVNG 240

Query: 241 FLPGWML 247
           F+PGWML
Sbjct: 241 FIPGWML 244

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy Swiss-Prot
Match: P29382 (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=1 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 1.8e-96
Identity = 190/252 (75.40%), Postives = 218/252 (86.51%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-AKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGE+LGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNN 180
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNR+L +KL++M    +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 IRL----TWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSV-SDQITATTAPNHA 240
             +     WE  +Q+++YA   AQ+QG +QPL+CNPTLQ+GY   V S+QITATT    A
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQITATTQA-QA 240

Query: 241 QQVNAFLPGWML 247
           QQ N ++PGWML
Sbjct: 241 QQGNGYIPGWML 251

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy Swiss-Prot
Match: P29384 (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana OX=3702 GN=SEP2 PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.6e-91
Identity = 179/250 (71.60%), Postives = 209/250 (83.60%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEV-AKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPL 120
           SNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGE+LGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSS--R 180
           NSKELEQLERQL+ SLKQVR  KTQYMLDQLSDLQ KE +L++ NR+L++KLE+M     
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 NNIRLTWEEVD-QSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQ 240
           ++I   WE  D Q+++Y    A +QG +Q L+C+PTLQIGYS  V  +  A T    +QQ
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQ 240

Query: 241 VNAFLPGWML 247
            N ++PGWML
Sbjct: 241 GNGYIPGWML 250

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy Swiss-Prot
Match: Q8LLR0 (Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=2)

HSP 1 Score: 295.4 bits (755), Expect = 5.8e-79
Identity = 169/249 (67.87%), Postives = 195/249 (78.31%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKE-LE-SSYREYLKLKARFESLQRTQRNLLGEELGP 120
           S+MLKTLERYQKC+YGA E     +E LE SS +EYLKLKAR+E+LQR+QRNLLGE+LGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRN 180
           L++KELE LERQL+ SLKQ+RST+TQYMLDQL+DLQ KE ML E N++L  +L E +  N
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQVN 180

Query: 181 NIRLTWEEVDQSMSYAPQNAQTQ--GFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQ 240
             +L W    Q + Y  Q AQ Q  GFF PL+C PTLQIGY     D IT   A      
Sbjct: 181 --QLQWNPNAQDVGYGRQQAQPQGDGFFHPLECEPTLQIGYQ---PDPITVAAA---GPS 240

Query: 241 VNAFLPGWM 246
           VN ++PGW+
Sbjct: 241 VNNYMPGWL 241

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy Swiss-Prot
Match: Q03489 (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE=1 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 2.2e-78
Identity = 170/249 (68.27%), Postives = 194/249 (77.91%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKE-LE-SSYREYLKLKARFESLQRTQRNLLGEELGP 120
           S+MLKTLERYQKC+YGA E     +E LE SS +EYLKLKAR+E+LQR+QRNLLGE+LGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRN 180
           LNSKELE LERQL+ SLKQ+RST+TQ MLDQL DLQ KE  L E NR+L  +L E S+ N
Sbjct: 121 LNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN 180

Query: 181 NIRLTWEEVDQSMSYAPQNAQTQ--GFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQ 240
              L W++  Q + Y  Q  QTQ  GFF PL+C PTLQIGY    +D IT   A      
Sbjct: 181 ---LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ---NDPITVGGA---GPS 240

Query: 241 VNAFLPGWM 246
           VN ++ GW+
Sbjct: 241 VNNYMAGWL 240

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy TrEMBL
Match: A0A6J1GB60 (developmental protein SEPALLATA 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452571 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.7e-129
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF
Sbjct: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy TrEMBL
Match: A0A6J1KF82 (developmental protein SEPALLATA 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493333 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.5e-127
Identity = 242/246 (98.37%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWEEVDQ MSYAPQNAQTQGFFQPLDCNPTLQIGYS +VSDQITATTAPNHAQQVNAF
Sbjct: 181 RLTWEEVDQGMSYAPQNAQTQGFFQPLDCNPTLQIGYSAAVSDQITATTAPNHAQQVNAF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy TrEMBL
Match: A0A6J1DN93 (developmental protein SEPALLATA 1 OS=Momordica charantia OX=3673 GN=LOC111022168 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.9e-121
Identity = 229/246 (93.09%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEV KPAKELESSYREYLKLK+RFESLQRTQRNLLGE+LGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNR+LTLKLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTW+  DQSMSY PQNAQTQGFFQPLDCNPTLQIGY+ +VSDQ+TA+TAP HAQQVN F
Sbjct: 181 RLTWDGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTAAVSDQMTASTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy TrEMBL
Match: A0A6J1J038 (developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479996 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.4e-120
Identity = 229/246 (93.09%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEV KPAKELESSYREYLKLKARFESLQ TQRNLLGE+LGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNR+L +KLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWE  DQSMSYAPQ+AQTQGFFQ LDCNPTLQIGY+ +VSDQITATTAP HAQQVN F
Sbjct: 181 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. ExPASy TrEMBL
Match: A0A6J1GUW6 (developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457748 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.4e-120
Identity = 229/246 (93.09%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEV KPAKELESSYREYLKLKARFESLQ TQRNLLGE+LGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNR+L +KLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWE  DQSMSYAPQ+AQTQGFFQ LDCNPTLQIGY+ +VSDQITATTAP HAQQVN F
Sbjct: 181 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. NCBI nr
Match: XP_022949126.1 (developmental protein SEPALLATA 1-like [Cucurbita moschata] >XP_023523891.1 developmental protein SEPALLATA 1-like [Cucurbita pepo subsp. pepo] >KAG6607076.1 Agamous-like MADS-box protein MADS2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036768.1 Developmental protein SEPALLATA 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470.7 bits (1210), Expect = 7.7e-129
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF
Sbjct: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. NCBI nr
Match: XP_022998764.1 (developmental protein SEPALLATA 1-like [Cucurbita maxima])

HSP 1 Score: 464.2 bits (1193), Expect = 7.2e-127
Identity = 242/246 (98.37%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWEEVDQ MSYAPQNAQTQGFFQPLDCNPTLQIGYS +VSDQITATTAPNHAQQVNAF
Sbjct: 181 RLTWEEVDQGMSYAPQNAQTQGFFQPLDCNPTLQIGYSAAVSDQITATTAPNHAQQVNAF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. NCBI nr
Match: XP_022155022.1 (developmental protein SEPALLATA 1 [Momordica charantia])

HSP 1 Score: 443.7 bits (1140), Expect = 1.0e-120
Identity = 229/246 (93.09%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEV KPAKELESSYREYLKLK+RFESLQRTQRNLLGE+LGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNR+LTLKLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTW+  DQSMSY PQNAQTQGFFQPLDCNPTLQIGY+ +VSDQ+TA+TAP HAQQVN F
Sbjct: 181 RLTWDGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTAAVSDQMTASTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. NCBI nr
Match: KAG7018196.1 (Developmental protein SEPALLATA 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 440.3 bits (1131), Expect = 1.1e-119
Identity = 229/246 (93.09%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 57  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 116

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEV KPAKELESSYREYLKLKARFESLQ TQRNLLGE+LGPLN
Sbjct: 117 SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 176

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNR+L +KLEE+SSRNNI
Sbjct: 177 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 236

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWE  DQSMSYAPQ+AQTQGFFQ LDCNPTLQIGY+ +VSDQITATTAP HAQQVN F
Sbjct: 237 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 296

Query: 241 LPGWML 247
           LPGWML
Sbjct: 297 LPGWML 302

[Close]

BLAST of CmoCh01G004540.1 vs. NCBI nr
Match: XP_022955902.1 (developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata] >XP_022980708.1 developmental protein SEPALLATA 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 440.3 bits (1131), Expect = 1.1e-119
Identity = 229/246 (93.09%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPLN 120
           SNMLKTLERYQKCSYGAVEV KPAKELESSYREYLKLKARFESLQ TQRNLLGE+LGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNR+L +KLEE+SSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQVNAF 240
           RLTWE  DQSMSYAPQ+AQTQGFFQ LDCNPTLQIGY+ +VSDQITATTAP HAQQVN F
Sbjct: 181 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CmoCh01G004540.1 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-97
Identity = 190/252 (75.40%), Postives = 218/252 (86.51%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-AKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGE+LGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNN 180
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNR+L +KL++M    +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 IRL----TWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSV-SDQITATTAPNHA 240
             +     WE  +Q+++YA   AQ+QG +QPL+CNPTLQ+GY   V S+QITATT    A
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQITATTQA-QA 240

Query: 241 QQVNAFLPGWML 247
           QQ N ++PGWML
Sbjct: 241 QQGNGYIPGWML 251

[Close]

BLAST of CmoCh01G004540.1 vs. TAIR 10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 345.1 bits (884), Expect = 4.6e-95
Identity = 190/263 (72.24%), Postives = 218/263 (82.89%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-AKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGE+LGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSSRNN 180
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNR+L +KL++M    +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 IRL----TWEEVDQSMSYAPQNAQTQGFFQPLDCNPTLQIG-----------YSGSV-SD 240
             +     WE  +Q+++YA   AQ+QG +QPL+CNPTLQ+G           Y   V S+
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGCCFGDDDDDDRYDNPVCSE 240

Query: 241 QITATTAPNHAQQVNAFLPGWML 247
           QITATT    AQQ N ++PGWML
Sbjct: 241 QITATTQA-QAQQGNGYIPGWML 262

[Close]

BLAST of CmoCh01G004540.1 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 335.1 bits (858), Expect = 4.7e-92
Identity = 179/250 (71.60%), Postives = 209/250 (83.60%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEV-AKPAKELESSYREYLKLKARFESLQRTQRNLLGEELGPL 120
           SNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGE+LGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEEMSS--R 180
           NSKELEQLERQL+ SLKQVR  KTQYMLDQLSDLQ KE +L++ NR+L++KLE+M     
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 NNIRLTWEEVD-QSMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQQ 240
           ++I   WE  D Q+++Y    A +QG +Q L+C+PTLQIGYS  V  +  A T    +QQ
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQ 240

Query: 241 VNAFLPGWML 247
            N ++PGWML
Sbjct: 241 GNGYIPGWML 250

[Close]

BLAST of CmoCh01G004540.1 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75
Identity = 159/250 (63.60%), Postives = 193/250 (77.20%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKEL---ESSYREYLKLKARFESLQRTQRNLLGEELG 120
           S+ML+TLERYQKC+YGA E   P++E     SS +EYLKLK R+++LQRTQRNLLGE+LG
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 PLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEE-MSS 180
           PL++KELE LERQL+SSLKQ+R+ +TQ+MLDQL+DLQ+KE+ML ETN++L L+L +    
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM 180

Query: 181 RNNIRLTWEEVDQ-SMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHAQ 240
              +    EEVD     +  Q   +Q FFQPL+C P LQIGY G   D + A        
Sbjct: 181 PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQ-QDGMGA------GP 240

Query: 241 QVNAFLPGWM 246
            VN ++ GW+
Sbjct: 241 SVNNYMLGWL 243

[Close]

BLAST of CmoCh01G004540.1 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-75
Identity = 159/251 (63.35%), Postives = 193/251 (76.89%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRSGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRR+GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVAKPAKEL----ESSYREYLKLKARFESLQRTQRNLLGEEL 120
           S+ML+TLERYQKC+YGA E   P++E      SS +EYLKLK R+++LQRTQRNLLGE+L
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRSLTLKLEE-MS 180
           GPL++KELE LERQL+SSLKQ+R+ +TQ+MLDQL+DLQ+KE+ML ETN++L L+L +   
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 SRNNIRLTWEEVDQ-SMSYAPQNAQTQGFFQPLDCNPTLQIGYSGSVSDQITATTAPNHA 240
               +    EEVD     +  Q   +Q FFQPL+C P LQIGY G   D + A       
Sbjct: 181 MPLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQ-QDGMGA------G 240

Query: 241 QQVNAFLPGWM 246
             VN ++ GW+
Sbjct: 241 PSVNNYMLGWL 244

The following BLAST results are available for this feature:

BLAST of CmoCh01G004540.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR2	1.2e-103	78.95	Agamous-like MADS-box protein MADS2 OS=Vitis vinifera OX=29760 GN=MADS2 PE=2 SV=...	[more]
P29382	1.8e-96	75.40	Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=1 S...	[more]
P29384	6.6e-91	71.60	Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana OX=3702 GN=SEP2 PE=1 S...	[more]
Q8LLR0	5.8e-79	67.87	Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=...	[more]
Q03489	2.2e-78	68.27	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE...	[more]

BLAST of CmoCh01G004540.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB60	3.7e-129	100.00	developmental protein SEPALLATA 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KF82	3.5e-127	98.37	developmental protein SEPALLATA 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114933...	[more]
A0A6J1DN93	4.9e-121	93.09	developmental protein SEPALLATA 1 OS=Momordica charantia OX=3673 GN=LOC111022168...	[more]
A0A6J1J038	5.4e-120	93.09	developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GUW6	5.4e-120	93.09	developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CmoCh01G004540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949126.1	7.7e-129	100.00	developmental protein SEPALLATA 1-like [Cucurbita moschata] >XP_023523891.1 deve...	[more]
XP_022998764.1	7.2e-127	98.37	developmental protein SEPALLATA 1-like [Cucurbita maxima]	[more]
XP_022155022.1	1.0e-120	93.09	developmental protein SEPALLATA 1 [Momordica charantia]	[more]
KAG7018196.1	1.1e-119	93.09	Developmental protein SEPALLATA 2, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022955902.1	1.1e-119	93.09	developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata] >XP_022980708....	[more]

BLAST of CmoCh01G004540.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15800.1	1.3e-97	75.40	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	4.6e-95	72.24	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	4.7e-92	71.60	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.1	1.1e-75	63.60	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	1.4e-75	63.35	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..144
None	No IPR available	PANTHER	PTHR48019:SF87	DEVELOPMENTAL PROTEIN SEPALLATA 1	coord: 1..231
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..231
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 68.71 coord: 38..59 score: 67.51 coord: 23..38 score: 83.63
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 6.6E-41 score: 151.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 9.7E-26 score: 89.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.318977
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..83 e-value: 2.5E-27 score: 96.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..77
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 85..171 e-value: 2.7E-26 score: 91.6
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..177 score: 15.429535
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 8.45084E-45 score: 143.076

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G004540	CmoCh01G004540	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G004540.1:exon:2623	CmoCh01G004540.1:exon:2623	exon
CmoCh01G004540.1:exon:2624	CmoCh01G004540.1:exon:2624	exon
CmoCh01G004540.1:exon:2625	CmoCh01G004540.1:exon:2625	exon
CmoCh01G004540.1:exon:2626	CmoCh01G004540.1:exon:2626	exon
CmoCh01G004540.1:exon:2627	CmoCh01G004540.1:exon:2627	exon
CmoCh01G004540.1:exon:2628	CmoCh01G004540.1:exon:2628	exon
CmoCh01G004540.1:exon:2629	CmoCh01G004540.1:exon:2629	exon
CmoCh01G004540.1:exon:2630	CmoCh01G004540.1:exon:2630	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G004540.1:five_prime_utr	CmoCh01G004540.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_2	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_3	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_4	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_5	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_6	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_7	CDS
CmoCh01G004540.1:cds	CmoCh01G004540.1:cds_8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G004540.1:three_prime_utr	CmoCh01G004540.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G004540.1	CmoCh01G004540.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding