Cmc11g0288621.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc11g0288621.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Complex I-B22
Location	CMiso1.1chr11: 3110365 .. 3115514 (-)
Sequence length	858
RNA-Seq Expression	Cmc11g0288621.1
Synteny	Cmc11g0288621.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATCGTTTAGACGCCGTTATCTCCATTGTTGGTCCAAATCAAAACAAAACCACAATAAACAATAATACAAAGCCATCTAAAGAAGAAGAAGAAGAAGAAAGAGAGAGATGAGCTTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTTTACAAAGATGTATTTGTTTTCTTCATCCCCATTTCCCACTTCATTGTTTTGACATTTCTTCGATTTTGTCATTGATTCTTCTAATCTTCCTTTGATTCAGGCGTCGGACCTTCGGGAGAGATTCGAAGCGAACAGACATGTGGTTTGTTCTCTCTCTGTTCCTTTGATCGATTTTTTTTGTTCTTTTTCTATGTTTTCGTTGAGTATAAATTTCATGCATTTCGACCTCTTGTGAGTTAATTGATATAGGGGTGTGGATATGAAATGATGAAGGTTTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGTGCGGCTGGATTGATTGTTTCAGCTGTACACTCTTCTTTCACTTGCATGGATTTTTCTTTCAAACATTTTTTTGTGTAAATTGTCTTGCGTTACTTGATGAGATATTAAAATGTGGTTTTTATTGATAGTTTTGGATGAACGATCTAGTGGAGTGATTTTGAAATTGTTAAATTCACTTTTGTTGTGTTTAAGATCATTTTGAAACACATTTGATTACTCAAAATCGAATCAATGTTTAATTTTACACTTTAAAGGCTTTTTTCATACTTTTAAAACTTATTCTGATTGATTAAAAGCATTTTCAGAGTAATTTTGAAAATGAAAAAAAGTGATTCTAACTATTTTAGAATCACTCTTAAACATGCGGCTAGTCTATTTGTTCTCTGGGATGAATATTACTGGTTGATCTTTGAATATCGTCTGCTTACTGCATCTGGAGAAGTGTGGATTTTGCGGAGAAATATTCTGATATCCTGGTAATCAAATATGACCATTTCCAGATTCAAATTTGTGTTCAACTAAGCAAGCATTCTCTTATAGAAATTATTTTCCTATAAATTTAAGTTTAACCATTGAGTTGCTTGTCTTACATGTGTTCATTGCTCTCTCTAGAACCATGGTGTTAAATAAGGAAAAAAAAAGTTCGAAGACTGATGTGGGACGGCAGTTAGAAACTTATGAGAATTAACTTGGAATTATACTTGAAACTTCAGACTTTGATGGGTTTTATTAATCACGCGTAAGACTTGGAGATCTGTTCTAGGACATTAGGTTAAAACTAAAATATTAGATCAGGGGTTCAAGCTGTGAAAGGTCTACATGTATAGATCAACGTGATTTTGTTCAGCAAGCCATGATTTCTATGCTATTGATCTATTGTTTATGGATCCTTTTTGGGGTGGATTTGCAGGAAAATCTTGACACAATAGATAAGCTGATAGAGAATGGGGAAGCTTCCTATGATAAGTGGCGCCATCCTGATCCCTATATCGGTAAGCACAATCATGAGTGAATTTGGTCATGTGGCAGTTAATAAAAGTAAGGTTGCCAAATCAAATGCTTTTACTGATTATGTAATATCTGTCCTGTAGATAGGGTATGTTTTCTGTTTATTTGAAATGCTGCTAAGTCGTTGATTTTCTTTTCCTCCCTTTTGAATAATAGAAACTGTATTGTTGAAACTTTATGAACAAGATATTTCTAGTTTAATTTTAAAAAATAAAATACCCTATGGGTTTCTCCATTCTAAGAATCAATTTAGTAGGTTGGAATAATAGTAACTAGCCATAAACTTTAGATTTTCCTTCAGATGTTGCTTCTTGAGCATCCAAGAATCTAAGATGCTTGCATGAAATTTTTTATATTATTTTTTTAATTTATATTTGTTGGGTGGGGTTCCCAAAGCCTGTAGATTCTTCCTTCTTTTGTTCTAATACAATATTGTTTCATATAAGTGAAAAAAAAAATTAAATGAGAAAGAGTGATGTATAAACACAAAATGTAGAACAACTGTAGGATGGGGGGAATGAGATACCCACTTCTGATACGAAGCAACATATTATATCGAAGCCTTCTAATTATTTGTAATAATGAGTAGGCTATAGTAAAAGTTCACATGGTTTGAAGTTGAACACTACCTAGTAGTATGCTACTATGCTCTAGATAAAAAATAATCCACTGAAGACAACCTATGTTGAAAATTCTCCCATTTCTCTTTTTCCATATCATGATTCACAAAATAGCCCCCACCGCACCACTCCATAAAATTGTGGTCTTCCCTTTAAAGGACATTCCCTCTAGGCTCTTCATTAGTCACCTATCAATCTTCTCAATGAGACATACAGCCAACTCAAAAAGCTTGAAAGAGGGAAAACTGTGCTGAGAAGAACAGGAGAATGGGCAGTGGGTAGCCTGTGATCCAAATATTCTCCCTCCTTCAAGCACAAACAGCGATGAAGACTCTCGGCAACTTATCTGAAGCATCAAGGCTTTTATGCATGACCAACCAAATGAAGAGCTTAACTTTCTTAGGCACCTTTCTCTTCCAGTTGTAGTTCACCATGGTAGTTTTAACTTCAGCCTTCAACTTAGTCAAGAAAGTTGGTGGTGAAAGATTATGACGTTCTGTGTTTATTAATATGCTTGGAAATAAAAATTTGTTGTGTTTATTTTGTATTAACTTCTCCATTAGAACGAAAGAAGATTAACACATGTACGACATTACTTGAACAGGATTTGTTCCATAGGTTGTACAAATTTGTCCTTGAGTTCTAAATAAGATTAACGCCTGTTCTGGCAATGTCAGTGTATCAGTTTATTGATGTTTATCTTATATATCATCAATGTCATTTTGTTTTTTTTTTTAGATTCCTTATCATAAGTTATATTAGCAATTAAGTTTGTTTTTGTATTTTCTATCTACCTTCAGATTAGAAGGGGTGAAGATTGCTGGGTTTATTGCCAAACAATACAAAATGGTGAGAGATTAATAGCATTATGATCTCAAAAGTCTAAAGAAGGGAGAGATAGTGAAATGAGCTATAGATGCCATGCAATCATGGAAACCTGGGTCTCCTAGTTGCTCAGTGTCCTTAATTTCAATAAATTTGACCCAGGCATATGTATACCATCCCCTTAACATCCATGATTACATCAAAGGAACTAGCACCGTATAGGGTATGAGGATTCTTCGTCACAAGACTTCATCCTTGCGTGCTTATCATCACCCTTGCAAAAACCTTTTCTGAAATATAAAATTCTTTTTTATGAAGTATGATGGTCTTTGATGAGTTTGGGAGAAGGAATCCTCAATTCTAGAGTATATTTATAGTTAACTGTTAGTTAAGTTGCAGACATGCGAATGTAAAAACAATTTGCTCCCCACTCCCTGATGGTTGCCAGCTGCTATCTAAAAGGCTAAAACTTTGAAGTATCATTTCATTGTTTGTTTCTCTGTTCTGCTTAGAACAAGAGAATCTATGCGGTCAATCCTAATTTCTTTTTACCTTTACACTGTAGTTCCATGGGCTCCTGGTGGTTCTAAGTTTACAAGAAACCCAATTCCACCTGCAGGGGTAAGTTCTCTTTTGAAGATTGTTTGGGTTTTCTTTTCATAAAATTTTTTAGATCTTAATTCCTTCTCACCACTTCAGTTTTTTCTTGAAAAAGTATTATTTTTATTTATTTGCATATGTCTTGTAACTTGTTTTTATGCCTTATGGGACTATGTAGCTACATCATCAACAACCTTGTCAAGTTCTATAGATCATACAATTTTTTCCCCACGAAAAACCATATATCATCATCATTAACCACCACATCCTCAGTGCTTTTTAAGAGAGGTTATGGTGTAGAAACTACAAGTTAATTATAATGATCTGTGGTTGGTTTATTGCTCAAATGAAACGTCTACTAAAATCACAGTTTTGAAATATGTGTAGTTTTCACGTGGCATTGTTTTCCCAAAGGCCAAAGATAAGCATTTGTAAACTTCCTTTGCCCTAATCTTGGAGGAAGCACATGAAAATGGAAAAGTTGAAGTTCTTTTCCCAGGGATTAGAGCATAGGAACTCAGCTTCACACTCTTTCCCTTTTTTCTTCTTTGGCTGTTTTAATCTGATATTTTGTTACGGGCTTGAGTTCTCTACTCTCTGTCCTTTGATTAATTTGCATGCAATTGTTAAGAGTGTAATCTCATCACTCAATATGACATCAACATCTATGTCTAATGATACAGATCGAGATCATATATGACTATGGGCGGGAAGATCACTGAAATCTTCATTATCGTGGTAATAAATAAAGGTAAGCTTACATTTGGCTGCTGATAGCAACAATGCCTATTTTCCCCCGTCTGCGTGTACCTCAAATTGGATTGTAACTTAATGAACTATTATATCGTTCTTGTATTTTGTTTTTATTTCTTGCTTATTCTCTCTCTTGCTGAGTTTGTATCTTTCTTAGCATTAGAAAAAAATGTGTTTTGTTCGTAATGCTGACCAGTAGGAGGTTATGGTCCTTTACTGAGTGAAATTTACCCATTTTGTCTGATGTTGCTGAAAACAAATTTTAGAAAATTGCTCTACTGTTGCAAGTGCTCAAACTGCTTTCTAAAGCAACCATTTACGTAATATTACAATTAACTATAGTTCTCGATAAACAATGACTCAAGTTTTGGGTACTTTTTGCTTGGAGTTCTAATGTCGAACAAAATGTTTTGGTTTGACTATTGCAGGACGAAATGGTTCGTGGCCTCACAATAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTGAATGAACACAATCATAGTATTTCCTTGTTGATTTGCTTTCTAGTTTTTGTTCAGATATGCAAATTTGACATAGAAAAAGTCACCATTGGAAGGATGTGTGATATGCTTCAACTTTTGGTTAATTTAAGTGTTCATCCTTTGCATATATCTACTTTCTGTTAATGTGGCCAATTTTTCTTTTTTTCCTTTTGGTGGGGAATTTGTCTGATTGCTTGTAGTAATGGCATCGGATGTTGGAAATGTGAGTGATGAATTACATGAACTAAAAGACTCAATAGGAAATCCTTTTAGTATTTGAAA

mRNA sequence

TGAAAATCGTTTAGACGCCGTTATCTCCATTGTTGGTCCAAATCAAAACAAAACCACAATAAACAATAATACAAAGCCATCTAAAGAAGAAGAAGAAGAAGAAAGAGAGAGATGAGCTTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTTTACAAAGATGCGTCGGACCTTCGGGAGAGATTCGAAGCGAACAGACATGTGGAAAATCTTGACACAATAGATAAGCTGATAGAGAATGGGGAAGCTTCCTATGATAAGTGGCGCCATCCTGATCCCTATATCGTTCCATGGGCTCCTGGTGGTTCTAAGTTTACAAGAAACCCAATTCCACCTGCAGGGATCGAGATCATATATGACTATGGGCGGGAAGATCACTGAAATCTTCATTATCGTGGTAATAAATAAAGGACGAAATGGTTCGTGGCCTCACAATAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTGAATGAACACAATCATAGTATTTCCTTGTTGATTTGCTTTCTAGTTTTTGTTCAGATATGCAAATTTGACATAGAAAAAGTCACCATTGGAAGGATGTGTGATATGCTTCAACTTTTGGTTAATTTAAGTGTTCATCCTTTGCATATATCTACTTTCTGTTAATGTGGCCAATTTTTCTTTTTTTCCTTTTGGTGGGGAATTTGTCTGATTGCTTGTAGTAATGGCATCGGATGTTGGAAATGTGAGTGATGAATTACATGAACTAAAAGACTCAATAGGAAATCCTTTTAGTATTTGAAA

Coding sequence (CDS)

ATGAGCTTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCATCGCCATCTCTTTTACAAAGATGCGTCGGACCTTCGGGAGAGATTCGAAGCGAACAGACATGTGGAAAATCTTGACACAATAGATAAGCTGATAGAGAATGGGGAAGCTTCCTATGATAAGTGGCGCCATCCTGATCCCTATATCGTTCCATGGGCTCCTGGTGGTTCTAAGTTTACAAGAAACCCAATTCCACCTGCAGGGATCGAGATCATATATGACTATGGGCGGGAAGATCACTGA

Protein sequence

MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVENLDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH

Homology

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BLAST of Cmc11g0288621.1 vs. NCBI nr
Match: XP_008461019.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 7.2e-61
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH
Sbjct: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. NCBI nr
Match: XP_004150138.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucumis sativus] >KGN61854.1 hypothetical protein Csa_006365 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59
Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSF STAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEA+RHVE+
Sbjct: 1   MSFLSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEAHRHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTID+LIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH
Sbjct: 61  LDTIDRLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. NCBI nr
Match: XP_022146081.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia])

HSP 1 Score: 231.5 bits (589), Expect = 3.7e-57
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEAN+HVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTIDKLI +GEAS++KWRHPDPYIVPWAPGGSKFTRNP PPAGIEIIYDYGREDH
Sbjct: 61  LDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPTPPAGIEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. NCBI nr
Match: XP_038902763.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 105/116 (90.52%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEA++HVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEAHKHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTID+LI +GEASY+KWRHPDPYIVPWAPGGSKFTRNP PP GIEIIY YGREDH
Sbjct: 61  LDTIDRLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGIEIIYGYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. NCBI nr
Match: KAG7035055.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 104/116 (89.66%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MS SSTAGYLARRAAQ+ERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEAN++VE+
Sbjct: 1   MSISSTAGYLARRAAQRERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKNVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTIDKLI +GEASY+KWRHPDPYIVPWAPGGSKFTRNP PP+G+EIIYDYGREDH
Sbjct: 61  LDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPSGVEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy Swiss-Prot
Match: Q945M1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana OX=3702 GN=CIB22 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-50
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FY+DASDLRE+F  N+ VE+
Sbjct: 1   MSGVSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           +D IDKLI +GEA Y+KWRHPDPYIVPWAPGGSKF RNP PPAGIEI+Y+YG ED+
Sbjct: 61  VDRIDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLEDN 116

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BLAST of Cmc11g0288621.1 vs. ExPASy Swiss-Prot
Match: Q02369 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus OX=9913 GN=NDUFB9 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 6.7e-09
Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
          M+F S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +++ ++
Sbjct: 1  MAFLSSGAYL----THQQKVLRLYKRALRHLESWCIHRDKYRYFACLLRARFDEHKNEKD 60

Query: 61 LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTR 98
          +    +L+   E  +   +HP PYI P +PGG+ + R
Sbjct: 61 MVKATQLLREAEEEFWHGQHPQPYIFPESPGGTSYER 93

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy Swiss-Prot
Match: Q9CQJ8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=10090 GN=Ndufb9 PE=1 SV=3)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
          M+F +   YL      +++V  LY+RAL+   +W +HR  +   A  +R RFE +++ ++
Sbjct: 1  MAFCAPPAYL----THQQKVLRLYKRALRHLESWCIHRDKYRYFACLMRARFEEHKNEKD 60

Query: 61 LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTR 98
          +    +L+   E  + + +HP PYI P +PGG+ F R
Sbjct: 61 MMRATQLLREAEEEFWQNQHPQPYIFPDSPGGTSFER 93

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy Swiss-Prot
Match: Q0MQE8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii OX=9601 GN=NDUFB9 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-08
Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
          M+F ++  YL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE +++ ++
Sbjct: 1  MAFLASGAYLTHR----QKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKD 60

Query: 61 LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTR 98
          +    +L++  E  +   +HP PYI P +PGG+ + R
Sbjct: 61 MVRATQLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy Swiss-Prot
Match: Q0MQE9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB9 PE=2 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07
Identity = 30/97 (30.93%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1  MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
          M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE +++ ++
Sbjct: 1  MAFLASGRYL----THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKD 60

Query: 61 LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTR 98
          +    +L++  E  +   +HP PYI P +PGG+ + R
Sbjct: 61 MAKATQLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy TrEMBL
Match: A0A1S3CDS7 (Complex I-B22 OS=Cucumis melo OX=3656 GN=LOC103499726 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.5e-61
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH
Sbjct: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy TrEMBL
Match: A0A0A0LLB9 (Complex I-B22 OS=Cucumis sativus OX=3659 GN=Csa_2G252030 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59
Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSF STAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEA+RHVE+
Sbjct: 1   MSFLSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEAHRHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTID+LIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH
Sbjct: 61  LDTIDRLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy TrEMBL
Match: A0A6J1CYA5 (Complex I-B22 OS=Momordica charantia OX=3673 GN=LOC111015377 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEAN+HVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFEANKHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LDTIDKLI +GEAS++KWRHPDPYIVPWAPGGSKFTRNP PPAGIEIIYDYGREDH
Sbjct: 61  LDTIDKLIAHGEASHNKWRHPDPYIVPWAPGGSKFTRNPTPPAGIEIIYDYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. ExPASy TrEMBL
Match: A0A6J1J845 (Complex I-B22 OS=Cucurbita maxima OX=3661 GN=LOC111484318 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-55
Identity = 103/116 (88.79%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+AN+HVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LD ID++I +GEASY+KWRHPDPYIVPWAPGGSKFTRNP PP GIEIIY+YGREDH
Sbjct: 61  LDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYNYGREDH 116

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BLAST of Cmc11g0288621.1 vs. ExPASy TrEMBL
Match: A0A6J1FYY7 (Complex I-B22 OS=Cucurbita moschata OX=3662 GN=LOC111449115 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-55
Identity = 103/116 (88.79%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+AN+HVE+
Sbjct: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           LD ID++I +GEASY+KWRHPDPYIVPWAPGGSKFTRNP PP GIEIIY+YGREDH
Sbjct: 61  LDRIDRMIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYNYGREDH 116

[Close]

BLAST of Cmc11g0288621.1 vs. TAIR 10
Match: AT4G34700.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-51
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 1   MSFSSTAGYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANRHVEN 60
           MS  STA Y ARRAAQKERVRILYRRALKDTLNWAVHRH+FY+DASDLRE+F  N+ VE+
Sbjct: 1   MSGVSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLREKFNVNQDVED 60

Query: 61  LDTIDKLIENGEASYDKWRHPDPYIVPWAPGGSKFTRNPIPPAGIEIIYDYGREDH 117
           +D IDKLI +GEA Y+KWRHPDPYIVPWAPGGSKF RNP PPAGIEI+Y+YG ED+
Sbjct: 61  VDRIDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPTPPAGIEIVYNYGLEDN 116

The following BLAST results are available for this feature:

BLAST of Cmc11g0288621.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461019.1	7.2e-61	99.14	PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucumis ...	[more]
XP_004150138.1	3.0e-59	96.55	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucumis sativus] >K...	[more]
XP_022146081.1	3.7e-57	93.10	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia...	[more]
XP_038902763.1	2.0e-55	90.52	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]	[more]
KAG7035055.1	2.0e-55	89.66	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrospe...	[more]

BLAST of Cmc11g0288621.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945M1	2.1e-50	79.31	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thali...	[more]
Q02369	6.7e-09	31.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus OX=991...	[more]
Q9CQJ8	1.1e-08	31.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=1...	[more]
Q0MQE8	5.7e-08	31.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Pongo abelii OX=9...	[more]
Q0MQE9	1.6e-07	30.93	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla g...	[more]

BLAST of Cmc11g0288621.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDS7	3.5e-61	99.14	Complex I-B22 OS=Cucumis melo OX=3656 GN=LOC103499726 PE=3 SV=1	[more]
A0A0A0LLB9	1.5e-59	96.55	Complex I-B22 OS=Cucumis sativus OX=3659 GN=Csa_2G252030 PE=3 SV=1	[more]
A0A6J1CYA5	1.8e-57	93.10	Complex I-B22 OS=Momordica charantia OX=3673 GN=LOC111015377 PE=3 SV=1	[more]
A0A6J1J845	2.9e-55	88.79	Complex I-B22 OS=Cucurbita maxima OX=3661 GN=LOC111484318 PE=3 SV=1	[more]
A0A6J1FYY7	2.9e-55	88.79	Complex I-B22 OS=Cucurbita moschata OX=3662 GN=LOC111449115 PE=3 SV=1	[more]

BLAST of Cmc11g0288621.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34700.1	1.5e-51	79.31	LYR family of Fe/S cluster biogenesis protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 19..72 e-value: 2.8E-6 score: 27.3
IPR033034	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9	PANTHER	PTHR12868	NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT	coord: 2..115
None	No IPR available	PANTHER	PTHR12868:SF0	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 9	coord: 2..115
None	No IPR available	CDD	cd20263	Complex1_LYR_NDUFB9_LYRM3	coord: 16..92 e-value: 3.33491E-35 score: 113.812

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc11g0288621	Cmc11g0288621	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0288621.1-exon	Cmc11g0288621.1-exon-CMiso1.1chr11:3110365..3110731	exon
Cmc11g0288621.1-exon	Cmc11g0288621.1-exon-CMiso1.1chr11:3111162..3111229	exon
Cmc11g0288621.1-exon	Cmc11g0288621.1-exon-CMiso1.1chr11:3111892..3111947	exon
Cmc11g0288621.1-exon	Cmc11g0288621.1-exon-CMiso1.1chr11:3113974..3114055	exon
Cmc11g0288621.1-exon	Cmc11g0288621.1-exon-CMiso1.1chr11:3115139..3115180	exon
Cmc11g0288621.1-exon	Cmc11g0288621.1-exon-CMiso1.1chr11:3115272..3115514	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0288621.1-three_prime_utr	Cmc11g0288621.1-three_prime_utr-CMiso1.1chr11:3110365..3110731	three_prime_UTR
Cmc11g0288621.1-three_prime_utr	Cmc11g0288621.1-three_prime_utr-CMiso1.1chr11:3111162..3111190	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0288621.1-cds	Cmc11g0288621.1-cds-CMiso1.1chr11:3111191..3111229	CDS
Cmc11g0288621.1-cds	Cmc11g0288621.1-cds-CMiso1.1chr11:3111892..3111947	CDS
Cmc11g0288621.1-cds	Cmc11g0288621.1-cds-CMiso1.1chr11:3113974..3114055	CDS
Cmc11g0288621.1-cds	Cmc11g0288621.1-cds-CMiso1.1chr11:3115139..3115180	CDS
Cmc11g0288621.1-cds	Cmc11g0288621.1-cds-CMiso1.1chr11:3115272..3115403	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc11g0288621.1-five_prime_utr	Cmc11g0288621.1-five_prime_utr-CMiso1.1chr11:3115404..3115514	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc11g0288621.1	Cmc11g0288621.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone