Cmc10g0273821.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc10g0273821.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr10: 7381028 .. 7382287 (+)
Sequence length364
RNA-Seq ExpressionCmc10g0273821.1
SyntenyCmc10g0273821.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTCATCTTCTTCTCTAAGATAACCATCTACTGTCGCCGCCTCATCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGGATTTTCCCATCAAGGATAAGAGGATTTTTCAACCTCCATCTAAGTAACCTTGGTAAGCCAATAAAATTAAATTAATATTTTATTAATTTAATTTTGGATCTATTTGGGATTTCTTTAAATGTTCAATTGGCTAAACTTTTTAAGATCTAAATCTTGGATTTTTCCCAATCAAGGTTGAATTGGTTTCAACCCCTTTTGTTTGAGAAGTTAATTAATTTGGGAGAATTTTTTGGATATTAGCCAATTGCTAATTTCATTAATTAAGATACTAAGTTTTCCTTTAATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAGCTAGGGAGTACCTTTGTTTGACTAAAATCTCCAGGTAAGAGATTCTCCTACTAGACCTTTGAACTGAATTTAAGAGACCGCATGTAATTATGATTATGCATTGATGGTAACTAAAATGCATAACTTGATGATTGATGATGATGGCTGATGTTATGTTAATGACCGGTAGTATGTTGTTGATGACTATTGATGATTGTTGATGCATGATATATTAATCACATGATTAAGGACGTTAAGATTAATATTCATGCCATGTCATGATGTTATGTTATGCTACATGCTATGGATAGGGTGTTTTGTTAACTTTGTCTATTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTTTTTAGGACTGCGTAGTCTGATGGGACCGCCAGTCTAGCATGGATATAGATATGATTCGAGTGATTCGACGGGATCCTCGCAACTCGATTGTCTTAGTGTTTCCTCCGAGTTCGCTACAGACCAGTATGTCCTAGGTGCTCCCTCGGGACGTCGAAGACCAGATTCTGTTTCTACGGGAGCGCATGTTGCAAGTGTCTGGGAACGTGCCAGTTATTGGGTACCTTTTCAGGACTCTAATGGGAAGTTAACAGACACCTAGCGGGACTAGTAGTAGGTCCCTTACTGAGTATATGTTTATACTCACTCTTTCTATGTTTAATATTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCAACAGAGAAGGATCCGTGACATGCCATGTGAGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTTCGTTTTTAATGAAAATTTAGTCTTCCCTCGTTTCAAAAAAAGTGTC

mRNA sequence

TTTCTTCATCTTCTTCTCTAAGATAACCATCTACTGTCGCCGCCTCATCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGGATTTTCCCATCAAGGATAAGAGGATTTTTCAACCTCCATCTAAGATCAAGTTAATTGGAGAATTTTTACTGTCAGCTAGGGAGTACCTTTGTTTGACTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCAACAGAGAAGGATCCGTGACATGCCATGTGAGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTTCGTTTTTAATGAAAATTTAGTCTTCCCTCGTTTCAAAAAAAGTGTC

Coding sequence (CDS)

ATGGATTTTCCCATCAAGGATAAGAGGATTTTTCAACCTCCATCTAAGATCAAGTTAATTGGAGAATTTTTACTGTCAGCTAGGGAGTACCTTTGTTTGACTAAAATCTCCAGGCGAAGGTAA

Protein sequence

MDFPIKDKRIFQPPSKIKLIGEFLLSAREYLCLTKISRRR
Homology
The following BLAST results are available for this feature:
BLAST of Cmc10g0273821.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0273821.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0273821.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc10g0273821.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc10g0273821Cmc10g0273821gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0273821.1-exonCmc10g0273821.1-exon-CMiso1.1chr10:7381028..7381170exon
Cmc10g0273821.1-exonCmc10g0273821.1-exon-CMiso1.1chr10:7381419..7381484exon
Cmc10g0273821.1-exonCmc10g0273821.1-exon-CMiso1.1chr10:7382133..7382287exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0273821.1-five_prime_utrCmc10g0273821.1-five_prime_utr-CMiso1.1chr10:7381028..7381123five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0273821.1-cdsCmc10g0273821.1-cds-CMiso1.1chr10:7381124..7381170CDS
Cmc10g0273821.1-cdsCmc10g0273821.1-cds-CMiso1.1chr10:7381419..7381484CDS
Cmc10g0273821.1-cdsCmc10g0273821.1-cds-CMiso1.1chr10:7382133..7382142CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc10g0273821.1-three_prime_utrCmc10g0273821.1-three_prime_utr-CMiso1.1chr10:7382143..7382287three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc10g0273821.1Cmc10g0273821.1-proteinpolypeptide