Cmc07g0199841.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc07g0199841.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Dehydrin DHN1
Location	CMiso1.1chr07: 22596019 .. 22596644 (+)
Sequence length	626
RNA-Seq Expression	Cmc07g0199841.1
Synteny	Cmc07g0199841.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGAAGTTCTTATCCACTAAATTCCCTCTCTCAATTTAAATATCTTTGAGCTCTCGCTAAAAGAGAAAAAGAAAGAAAAGAAAAATGGCACACTACCAAAACCAATACAGCGCACAAGCTGGAAGCGATGCATACGGCTACCCAATTCGTCAGACGGATGAATACGGCAACGTCATCTCCGAAACCGGGCAGTATGTTGATACCCTCCGCCGGACCGACGAGCAGTACCCCAAGCCGAGTCATGAAAGCGAGCAGCAGCAGCCGGTTGGGATATCTCATAATGAAAAAGTGGTGATTACGAAGACGACAGAGGATGGGAGTGGACATCATGAGAAGAAGGGGATAATAGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGAAAAGGCTAAAGGCTGTGTGTGTGTGGTCGTTTTCCTTAACTAAACTTAAGTTTTGTGAAGTGTTTTTAGAGAAAGCACAATGAACGAAGGGACATGTTTGTGCGTGACTAAATAATAATATTGAAGTGAGGACTTAAGTTACTAATGTATGTTATTAATTAATATGCACTATTTGTTTTTCTTTTGAGTACATCATACGTTTTTATGCATGTATGGGCTGACAAAAAGTATATCAAA

mRNA sequence

TCTTGAAGTTCTTATCCACTAAATTCCCTCTCTCAATTTAAATATCTTTGAGCTCTCGCTAAAAGAGAAAAAGAAAGAAAAGAAAAATGGCACACTACCAAAACCAATACAGCGCACAAGCTGGAAGCGATGCATACGGCTACCCAATTCGTCAGACGGATGAATACGGCAACGTCATCTCCGAAACCGGGCAGTATGTTGATACCCTCCGCCGGACCGACGAGCAGTACCCCAAGCCGAGTCATGAAAGCGAGCAGCAGCAGCCGGTTGGGATATCTCATAATGAAAAAGTGGTGATTACGAAGACGACAGAGGATGGGAGTGGACATCATGAGAAGAAGGGGATAATAGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGAAAAGGCTAAAGGCTGTGTGTGTGTGGTCGTTTTCCTTAACTAAACTTAAGTTTTGTGAAGTGTTTTTAGAGAAAGCACAATGAACGAAGGGACATGTTTGTGCGTGACTAAATAATAATATTGAAGTGAGGACTTAAGTTACTAATGTATGTTATTAATTAATATGCACTATTTGTTTTTCTTTTGAGTACATCATACGTTTTTATGCATGTATGGGCTGACAAAAAGTATATCAAA

Coding sequence (CDS)

ATGGCACACTACCAAAACCAATACAGCGCACAAGCTGGAAGCGATGCATACGGCTACCCAATTCGTCAGACGGATGAATACGGCAACGTCATCTCCGAAACCGGGCAGTATGTTGATACCCTCCGCCGGACCGACGAGCAGTACCCCAAGCCGAGTCATGAAAGCGAGCAGCAGCAGCCGGTTGGGATATCTCATAATGAAAAAGTGGTGATTACGAAGACGACAGAGGATGGGAGTGGACATCATGAGAAGAAGGGGATAATAGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGA

Protein sequence

MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQPVGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH

Homology

[Close]

BLAST of Cmc07g0199841.1 vs. NCBI nr
Match: KAA0044784.1 (dehydrin DHN1 [Cucumis melo var. makuwa] >TYK16681.1 dehydrin DHN1 [Cucumis melo var. makuwa])

HSP 1 Score: 204.5 bits (519), Expect = 4.2e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60
           MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP
Sbjct: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60

Query: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
           VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH
Sbjct: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 100

[Close]

BLAST of Cmc07g0199841.1 vs. NCBI nr
Match: KAE8649181.1 (hypothetical protein Csa_015017 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60
           MAHYQNQYSAQAGSD YGYPIRQTDEY NVISETGQYVDTLRRTD+QYPKP H SEQQQP
Sbjct: 162 MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQYVDTLRRTDDQYPKPIHGSEQQQP 221

Query: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
            GI HNEKVV+TKT EDGSGHHEKKG+IEKIKEKLPGGHH
Sbjct: 222 SGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH 261

[Close]

BLAST of Cmc07g0199841.1 vs. NCBI nr
Match: XP_011653150.2 (dehydrin Rab18 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60
           MAHYQNQYSAQAGSD YGYPIRQTDEY NVISETGQYVDTLRRTD+QYPKP H SEQQQP
Sbjct: 1   MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQYVDTLRRTDDQYPKPIHGSEQQQP 60

Query: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGH 100
            GI HNEKVV+TKT EDGSGHHEKKG+IEKIKEKLPGGH
Sbjct: 61  SGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH 99

[Close]

BLAST of Cmc07g0199841.1 vs. NCBI nr
Match: XP_038888416.1 (dehydrin Xero 1-like [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 7.4e-30
Identity = 71/105 (67.62%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDE-----QYPKPSHES 60
           MAHYQNQYSA++G+D YGYPIRQTDEYGNVISE+GQY DT  RTDE     QY  P   S
Sbjct: 1   MAHYQNQYSAKSGTDQYGYPIRQTDEYGNVISESGQYADTRHRTDEFRETDQYGNPIRRS 60

Query: 61  EQQQPVGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
           ++QQ  GI H++K V T   E G  HHEKKGI+EKIKEKLPGGHH
Sbjct: 61  DEQQQGGIFHHDKTVTTTRAEKGGEHHEKKGIMEKIKEKLPGGHH 105

[Close]

BLAST of Cmc07g0199841.1 vs. NCBI nr
Match: KAG6577230.1 (hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.5 bits (267), Expect = 7.0e-20
Identity = 66/131 (50.38%), Postives = 79/131 (60.31%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDE-----QYPKPSH-- 60
           MAHYQNQYSAQ+G+D YG PIRQTDEYGNVIS+T Q+ D LRRTDE     QY  P H  
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHGDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  --------------------ESEQQQPVGISHNEKVVIT-----KTTEDGSGHHEKKGII 100
                               + +QQQ  G+ H++K V T      TT +    HEKKG++
Sbjct: 61  DQHGVGDPTGRTTGTGMYEGQQQQQQRGGMFHHDKPVSTGGSVGYTTAEQGERHEKKGMM 120

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy Swiss-Prot
Match: P09442 (Late embryogenesis abundant protein D-11 OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.0e-06
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 1  MAHYQNQYSAQ--AGSDAYGYPIRQTDEYGNVI--SETGQYVDTLRRTDEQYPKPSHESE 60
          MAH+QNQYSA     +DAYG P R+TDEYGN I   ETG+ +  +           H   
Sbjct: 1  MAHFQNQYSAPEVTQTDAYGNPTRRTDEYGNPIPTQETGRGILGI---------GGHHHG 60

Query: 61 QQQPVGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPG 98
              +  + +     + + ++G+G  +KKG+ E++KEK+PG
Sbjct: 61 GHHGLHRTGSSSSSSSSSEDEGTG-KKKKGLKERLKEKIPG 91

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy Swiss-Prot
Match: P28639 (Dehydrin DHN1 OS=Pisum sativum OX=3888 GN=DHN1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-04
Identity = 44/133 (33.08%), Postives = 56/133 (42.11%), Query Frame = 0


Query: 1   MAHYQNQYSAQAG-SDAYGYPIRQTDEYGNVISETG--------QYVDTLRRTDEQYPKP 60
           M+ YQNQY AQ G +D YG P+ Q D+YGN IS  G         +  T   TD  +   
Sbjct: 1   MSQYQNQYGAQTGMTDEYGNPVNQVDQYGNPISGGGFTGEAGRQHFGTTGGATDHGHGHG 60

Query: 61  SHESEQQQPVGI-SHNEKV-----------------VITKTTEDGSG---------HHEK 98
                  Q  G  +H   V                   T T   GSG         H +K
Sbjct: 61  QQHRGVDQTTGYGTHTGGVGGYGTNPEYGNTNTGSGYGTGTGYGGSGTNEYVREDHHGDK 120

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy Swiss-Prot
Match: P28640 (Dehydrin DHN2 OS=Pisum sativum OX=3888 GN=DHN2 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-04
Identity = 42/132 (31.82%), Postives = 57/132 (43.18%), Query Frame = 0


Query: 1   MAHYQNQYSAQA-GSDAYGYPIRQTDEYGNVISETG---------QYVDTLRRTDEQYPK 60
           M+ YQNQY AQ   +D YG P+ Q D+YGN IS  G          Y  T   TD  + +
Sbjct: 1   MSQYQNQYGAQTRKTDEYGNPMNQVDQYGNPISGGGGLTGEAGRQHYGTTGGATDHGHGQ 60

Query: 61  PSHESEQ----------------QQPVGISHNEKVVITKTTEDGSG---------HHEKK 98
                +Q                +   G ++      T T   GSG         H +KK
Sbjct: 61  QHRGVDQTTGYGTHTGGVGGYGTKPEYGSTNTGSGYGTGTGYGGSGTTEYVREEHHGDKK 120

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy Swiss-Prot
Match: P30287 (Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-04
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 52  SHESEQQQPVGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPG-GHH 101
           SH+ E+Q+  G +       T T    +G HEKKGI+EKIKEKLPG GHH
Sbjct: 179 SHKQEEQKQAGHTAPAAGTGTGTGTHAAGKHEKKGIVEKIKEKLPGHGHH 228

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy Swiss-Prot
Match: P25863 (Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 4.3e-04
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 53  HESEQQQPVGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
           H+S +   +G +       T   + G+ HHEKKG++EKIKEKLPGGHH
Sbjct: 88  HDSNKTSSLGST-------TTAYDTGTVHHEKKGMMEKIKEKLPGGHH 128

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy TrEMBL
Match: A0A5D3CXL0 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005130 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60
           MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP
Sbjct: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60

Query: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
           VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH
Sbjct: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 100

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy TrEMBL
Match: A0A0A0KUH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045050 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.8e-44
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSHESEQQQP 60
           MAHYQNQYSAQAGSD YGYPIRQTDEY NVISETGQYVDTLRRTD+QYPKP H SEQQQP
Sbjct: 1   MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQYVDTLRRTDDQYPKPIHGSEQQQP 60

Query: 61  VGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
            GI HNEKVV+TKT EDGSGHHEKKG+IEKIKEKLPGGHH
Sbjct: 61  SGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH 100

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy TrEMBL
Match: A0A6J1EUD8 (dehydrin DHN1-like OS=Cucurbita moschata OX=3662 GN=LOC111436004 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-20
Identity = 66/132 (50.00%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDE-----QYPKPSH-- 60
           MAHYQNQYSAQ+G+D YG PIRQTDEYGNVIS+T Q+ D LRRTDE     QY  P H  
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHGDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  ---------------------ESEQQQPVGISHNEKVVIT-----KTTEDGSGHHEKKGI 100
                                + +QQQ  G+ H++K V T      TT +    HEKKG+
Sbjct: 61  DQHGVGDPTGRTTGTGMYEGRQQQQQQRGGMFHHDKPVSTGGSVGYTTAEQGERHEKKGM 120

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy TrEMBL
Match: A0A6J1C526 (dehydrin DHN1-like OS=Momordica charantia OX=3673 GN=LOC111008439 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.3e-15
Identity = 55/121 (45.45%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISETGQYVDTLRRTDEQYPKPSH------- 60
           MAHYQN Y  Q+G+D YG PIRQTDEYGNVI E+GQ+VD LRRT E      +       
Sbjct: 1   MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAG 60

Query: 61  -------ESEQ----QQPVGISHNEK---VVITKTTEDGSGHHEKKGIIEKIKEKLPGGH 101
                  +++Q     Q  G+ H++         T  +  G  EKKG++EKIKEKLPG H
Sbjct: 61  RTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYTAAEQGGGREKKGMMEKIKEKLPGAH 120

[Close]

BLAST of Cmc07g0199841.1 vs. ExPASy TrEMBL
Match: A0A6J1C5G3 (dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.7e-14
Identity = 59/136 (43.38%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 1   MAHYQNQYSAQAGSDAYGYPIRQTDEYGNVISET--GQYVDTLRRTDE-----QYPKPSH 60
           MAHYQNQY AQ+G+D YG PIR+TDEYGNVIS+T  GQY D L RTDE     QY  P  
Sbjct: 1   MAHYQNQYGAQSGTDQYGNPIRRTDEYGNVISDTGVGQYGDPLHRTDEFRQTDQYGNPVR 60

Query: 61  ESEQ-QQPVGI--------------------SHNEKVVI---------TKTTEDGSGHHE 100
            +++   P+G                      H E   +         + + +DG G   
Sbjct: 61  RTDEFGNPIGTGGATYEAGGYGGTGYGGGHHQHKEHQGVLRRSGSSSSSSSEDDGHGGRR 120

[Close]

BLAST of Cmc07g0199841.1 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 53  HESEQQQPVGISHNEKVVITKTTEDGSGHHEKKGIIEKIKEKLPGGHH 101
           H+S +   +G +       T   + G+ HHEKKG++EKIKEKLPGGHH
Sbjct: 88  HDSNKTSSLGST-------TTAYDTGTVHHEKKGMMEKIKEKLPGGHH 128

The following BLAST results are available for this feature:

BLAST of Cmc07g0199841.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044784.1	4.2e-49	100.00	dehydrin DHN1 [Cucumis melo var. makuwa] >TYK16681.1 dehydrin DHN1 [Cucumis melo...	[more]
KAE8649181.1	2.0e-43	90.00	hypothetical protein Csa_015017 [Cucumis sativus]	[more]
XP_011653150.2	1.3e-42	89.90	dehydrin Rab18 [Cucumis sativus]	[more]
XP_038888416.1	7.4e-30	67.62	dehydrin Xero 1-like [Benincasa hispida]	[more]
KAG6577230.1	7.0e-20	50.38	hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc07g0199841.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09442	6.0e-06	36.63	Late embryogenesis abundant protein D-11 OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
P28639	1.5e-04	33.08	Dehydrin DHN1 OS=Pisum sativum OX=3888 GN=DHN1 PE=2 SV=1	[more]
P28640	3.3e-04	31.82	Dehydrin DHN2 OS=Pisum sativum OX=3888 GN=DHN2 PE=2 SV=1	[more]
P30287	3.3e-04	52.00	Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2	[more]
P25863	4.3e-04	47.92	Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2	[more]

BLAST of Cmc07g0199841.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXL0	2.0e-49	100.00	Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005130 ...	[more]
A0A0A0KUH6	9.8e-44	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045050 PE=3 SV=1	[more]
A0A6J1EUD8	4.4e-20	50.00	dehydrin DHN1-like OS=Cucurbita moschata OX=3662 GN=LOC111436004 PE=3 SV=1	[more]
A0A6J1C526	7.3e-15	45.45	dehydrin DHN1-like OS=Momordica charantia OX=3673 GN=LOC111008439 PE=3 SV=1	[more]
A0A6J1C5G3	4.7e-14	43.38	dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1	[more]

BLAST of Cmc07g0199841.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50980.1	3.0e-05	47.92	dehydrin xero 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 46..99 e-value: 1.5E-8 score: 35.3
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..47 coord: 76..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..100
None	No IPR available	PANTHER	PTHR33346:SF29	DEHYDRIN RAB18	coord: 1..47 coord: 76..100
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 90..97

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc07g0199841	Cmc07g0199841	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199841.1-exon	Cmc07g0199841.1-exon-CMiso1.1chr07:22596019..22596644	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199841.1-five_prime_utr	Cmc07g0199841.1-five_prime_utr-CMiso1.1chr07:22596019..22596104	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199841.1-cds	Cmc07g0199841.1-cds-CMiso1.1chr07:22596105..22596407	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199841.1-three_prime_utr	Cmc07g0199841.1-three_prime_utr-CMiso1.1chr07:22596408..22596644	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc07g0199841.1	Cmc07g0199841.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009415	response to water
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
molecular_function	GO:0046872	metal ion binding