Cmc07g0192441.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc07g0192441.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBTB/POZ domain-containing protein DOT3
LocationCMiso1.1chr07: 13137415 .. 13137838 (-)
Sequence length325
RNA-Seq ExpressionCmc07g0192441.1
SyntenyCmc07g0192441.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGACGTCTCTTACTGGAACGCCAAATCCAGAGAGCGATTCAGATGGAGCCAAGCAGGTTCATGACCAGAGGATCGTGATTCCAAACAAACTCATCACTGAAGCTGAGTGCATCAATAGGAAAGATCAAGCATGGTAGAACCTTGAGTTCATTTAAGAATCTTGCGGGGAATATTGGCCTTCTACTACCTGAAGACTTAGTTTAAATACAATCTCTGTTTCTTCCCTTTGCAGGTTTATCACCACTCAGATCCCAACAGATTTGAAAATTAAAGTACAAGAGATCACCTTCCATGTTCACAAGGTAACTACCTCTATGCAAATAAGTTCAAACTTTGGTTCCATAATACATTAAACATTAAATGCGGCAAAAGAGTTCTTGAGGTCAATCAACCAAAATGATCAAGATTGAACAAGCTAACAA

mRNA sequence

CATGACGTCTCTTACTGGAACGCCAAATCCAGAGAGCGATTCAGATGGAGCCAAGCAGGTTCATGACCAGAGGATCGTGATTCCAAACAAACTCATCACTGAAGCTGAGTGCATCAATAGGAAAGATCAAGCATGGTTTATCACCACTCAGATCCCAACAGATTTGAAAATTAAAGTACAAGAGATCACCTTCCATGTTCACAAGGTAACTACCTCTATGCAAATAAGTTCAAACTTTGGTTCCATAATACATTAAACATTAAATGCGGCAAAAGAGTTCTTGAGGTCAATCAACCAAAATGATCAAGATTGAACAAGCTAACAA

Coding sequence (CDS)

ATGACGTCTCTTACTGGAACGCCAAATCCAGAGAGCGATTCAGATGGAGCCAAGCAGGTTCATGACCAGAGGATCGTGATTCCAAACAAACTCATCACTGAAGCTGAGTGCATCAATAGGAAAGATCAAGCATGGTTTATCACCACTCAGATCCCAACAGATTTGAAAATTAAAGTACAAGAGATCACCTTCCATGTTCACAAGGTAACTACCTCTATGCAAATAAGTTCAAACTTTGGTTCCATAATACATTAA

Protein sequence

MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQEITFHVHKVTTSMQISSNFGSIIH
Homology
BLAST of Cmc07g0192441.1 vs. NCBI nr
Match: KAA0053398.1 (BTB/POZ domain-containing protein DOT3 [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 9.6e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ
Sbjct: 13 MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 72

Query: 61 EITFHVHKVT 71
          EITFHVHK T
Sbjct: 73 EITFHVHKYT 82

BLAST of Cmc07g0192441.1 vs. NCBI nr
Match: XP_016901774.1 (PREDICTED: BTB/POZ domain-containing protein DOT3 [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 4.8e-30
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M SLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ
Sbjct: 13 MKSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 72

Query: 61 EITFHVHKVT 71
          EITFHVHK T
Sbjct: 73 EITFHVHKYT 82

BLAST of Cmc07g0192441.1 vs. NCBI nr
Match: TYK15877.1 (BTB/POZ domain-containing protein DOT3 [Cucumis melo var. makuwa])

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-29
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M SLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ
Sbjct: 13 MKSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 72

Query: 61 EITFHVHK 69
          EITFHVHK
Sbjct: 73 EITFHVHK 80

BLAST of Cmc07g0192441.1 vs. NCBI nr
Match: XP_031740482.1 (BTB/POZ domain-containing protein DOT3 [Cucumis sativus] >KGN53647.1 hypothetical protein Csa_014504 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-25
Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M SLT TPNPESDSDGA+QV DQRIV+PNKLIT+AEC+N KDQAWFITTQIPTDLKIKV+
Sbjct: 1  MKSLTATPNPESDSDGAEQVRDQRIVVPNKLITQAECVNTKDQAWFITTQIPTDLKIKVE 60

Query: 61 EITFHVHKVT 71
          E+TF+VHK T
Sbjct: 61 EVTFNVHKYT 70

BLAST of Cmc07g0192441.1 vs. NCBI nr
Match: XP_022929524.1 (BTB/POZ domain-containing protein DOT3-like [Cucurbita moschata])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 54/68 (79.41%), Postives = 64/68 (94.12%), Query Frame = 0

Query: 3   SLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQEI 62
           SLTG PN ESDS+GA+QVHD+RIVIPNKLITEA+CIN KD+AWFITT+IPTDL+I+VQE+
Sbjct: 79  SLTGMPNTESDSEGAEQVHDKRIVIPNKLITEADCINIKDEAWFITTKIPTDLRIQVQEV 138

Query: 63  TFHVHKVT 71
           TF+VHK T
Sbjct: 139 TFNVHKYT 146

BLAST of Cmc07g0192441.1 vs. ExPASy Swiss-Prot
Match: Q9LFU0 (BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana OX=3702 GN=DOT3 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07
Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M S++     +S  D A  V ++ I+ P++++T A    +KD++W++ +QIPTDL I+V 
Sbjct: 1  MNSVSAAERLKSFGD-AGPVCNKSIIFPSRVVTLANSFEKKDRSWYVKSQIPTDLSIQVN 60

Query: 61 EITFHVHK 69
          +ITF  HK
Sbjct: 61 DITFKAHK 67

BLAST of Cmc07g0192441.1 vs. ExPASy Swiss-Prot
Match: Q9S9Q9 (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 6.1e-04
Identity = 17/39 (43.59%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 30 KLITEAECINRKDQAWFITTQIPTDLKIKVQEITFHVHK 69
          KL ++++   R+ QAWF TT +P+D+ ++V E++FH+HK
Sbjct: 5  KLGSKSDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHK 43

BLAST of Cmc07g0192441.1 vs. ExPASy TrEMBL
Match: A0A5A7UEB1 (BTB/POZ domain-containing protein DOT3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00640 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.7e-31
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ
Sbjct: 13 MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 72

Query: 61 EITFHVHKVT 71
          EITFHVHK T
Sbjct: 73 EITFHVHKYT 82

BLAST of Cmc07g0192441.1 vs. ExPASy TrEMBL
Match: A0A1S4E0M8 (BTB/POZ domain-containing protein DOT3 OS=Cucumis melo OX=3656 GN=LOC103495786 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-30
Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M SLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ
Sbjct: 13 MKSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 72

Query: 61 EITFHVHKVT 71
          EITFHVHK T
Sbjct: 73 EITFHVHKYT 82

BLAST of Cmc07g0192441.1 vs. ExPASy TrEMBL
Match: A0A5D3CVC9 (BTB/POZ domain-containing protein DOT3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00550 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M SLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ
Sbjct: 13 MKSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 72

Query: 61 EITFHVHK 69
          EITFHVHK
Sbjct: 73 EITFHVHK 80

BLAST of Cmc07g0192441.1 vs. ExPASy TrEMBL
Match: A0A0A0KZ42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095570 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M SLT TPNPESDSDGA+QV DQRIV+PNKLIT+AEC+N KDQAWFITTQIPTDLKIKV+
Sbjct: 1  MKSLTATPNPESDSDGAEQVRDQRIVVPNKLITQAECVNTKDQAWFITTQIPTDLKIKVE 60

Query: 61 EITFHVHKVT 71
          E+TF+VHK T
Sbjct: 61 EVTFNVHKYT 70

BLAST of Cmc07g0192441.1 vs. ExPASy TrEMBL
Match: A0A6J1ENZ9 (BTB/POZ domain-containing protein DOT3-like OS=Cucurbita moschata OX=3662 GN=LOC111436065 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.1e-23
Identity = 54/68 (79.41%), Postives = 64/68 (94.12%), Query Frame = 0

Query: 3   SLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQEI 62
           SLTG PN ESDS+GA+QVHD+RIVIPNKLITEA+CIN KD+AWFITT+IPTDL+I+VQE+
Sbjct: 79  SLTGMPNTESDSEGAEQVHDKRIVIPNKLITEADCINIKDEAWFITTKIPTDLRIQVQEV 138

Query: 63  TFHVHKVT 71
           TF+VHK T
Sbjct: 139 TFNVHKYT 146

BLAST of Cmc07g0192441.1 vs. TAIR 10
Match: AT5G10250.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-08
Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 0

Query: 1  MTSLTGTPNPESDSDGAKQVHDQRIVIPNKLITEAECINRKDQAWFITTQIPTDLKIKVQ 60
          M S++     +S  D A  V ++ I+ P++++T A    +KD++W++ +QIPTDL I+V 
Sbjct: 1  MNSVSAAERLKSFGD-AGPVCNKSIIFPSRVVTLANSFEKKDRSWYVKSQIPTDLSIQVN 60

Query: 61 EITFHVHK 69
          +ITF  HK
Sbjct: 61 DITFKAHK 67

BLAST of Cmc07g0192441.1 vs. TAIR 10
Match: AT1G30440.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 44.7 bits (104), Expect = 4.3e-05
Identity = 17/39 (43.59%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 30 KLITEAECINRKDQAWFITTQIPTDLKIKVQEITFHVHK 69
          KL ++++   R+ QAWF TT +P+D+ ++V E++FH+HK
Sbjct: 5  KLGSKSDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHK 43

BLAST of Cmc07g0192441.1 vs. TAIR 10
Match: AT5G66560.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.7e-04
Identity = 16/28 (57.14%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 41 KDQAWFITTQIPTDLKIKVQEITFHVHK 69
          K QAWF TT +P+D++I+V ++TFH+HK
Sbjct: 9  KGQAWFCTTGLPSDIEIEVDDMTFHLHK 36

BLAST of Cmc07g0192441.1 vs. TAIR 10
Match: AT3G50840.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 42.0 bits (97), Expect = 2.8e-04
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 0

Query: 39 NRKDQAWFI-TTQIPTDLKIKVQEITFHVHK 69
          N K QAWF  TT +P+D++I+V +ITFH+HK
Sbjct: 3  NSKKQAWFFYTTGLPSDIEIEVDDITFHLHK 33

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0053398.19.6e-3198.57BTB/POZ domain-containing protein DOT3 [Cucumis melo var. makuwa][more]
XP_016901774.14.8e-3097.14PREDICTED: BTB/POZ domain-containing protein DOT3 [Cucumis melo][more]
TYK15877.11.4e-2998.53BTB/POZ domain-containing protein DOT3 [Cucumis melo var. makuwa][more]
XP_031740482.12.1e-2582.86BTB/POZ domain-containing protein DOT3 [Cucumis sativus] >KGN53647.1 hypothetica... [more]
XP_022929524.11.3e-2279.41BTB/POZ domain-containing protein DOT3-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9LFU04.5e-0738.24BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana OX=3702 GN=DOT3 P... [more]
Q9S9Q96.1e-0443.59BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Match NameE-valueIdentityDescription
A0A5A7UEB14.7e-3198.57BTB/POZ domain-containing protein DOT3 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S4E0M82.3e-3097.14BTB/POZ domain-containing protein DOT3 OS=Cucumis melo OX=3656 GN=LOC103495786 P... [more]
A0A5D3CVC96.7e-3098.53BTB/POZ domain-containing protein DOT3 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0KZ421.0e-2582.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095570 PE=3 SV=1[more]
A0A6J1ENZ96.1e-2379.41BTB/POZ domain-containing protein DOT3-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT5G10250.13.2e-0838.24Phototropic-responsive NPH3 family protein [more]
AT1G30440.14.3e-0543.59Phototropic-responsive NPH3 family protein [more]
AT5G66560.11.7e-0457.14Phototropic-responsive NPH3 family protein [more]
AT3G50840.12.8e-0458.06Phototropic-responsive NPH3 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc07g0192441Cmc07g0192441gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0192441.1-exonCmc07g0192441.1-exon-CMiso1.1chr07:13137415..13137604exon
Cmc07g0192441.1-exonCmc07g0192441.1-exon-CMiso1.1chr07:13137704..13137838exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0192441.1-three_prime_utrCmc07g0192441.1-three_prime_utr-CMiso1.1chr07:13137415..13137483three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0192441.1-cdsCmc07g0192441.1-cds-CMiso1.1chr07:13137484..13137604CDS
Cmc07g0192441.1-cdsCmc07g0192441.1-cds-CMiso1.1chr07:13137704..13137837CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc07g0192441.1-five_prime_utrCmc07g0192441.1-five_prime_utr-CMiso1.1chr07:13137838..13137838five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc07g0192441.1Cmc07g0192441.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination