Cmc05g0133111.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTAAAAAAAAATAAAAAAACATTACCAATAGGATGATGATGTATGTAAGTAGTACTAGAAAGTAGAAACCCCCCAAAGCCCTGCCTCTCGTTGTTGTTTCTGTATTATCATGCCCGGTTCTAAGTCCAAGGTACGCGGGAGAGGGCACTGGCGCCCGGCCGAGGACACCAAGCTGAAGGAACTCGTACGCCTTTACGGTCCTCAAAACTGGAACCTCATCGCCCAGAAACTGGAAGGACGATCTGGGAAGAGTTGTCGATTGAGATGGTTTAACCAACTGGACCCAAGGATTAACAGAAAAGCTTTCTCCGAAGAGGAAGAGGAGAGGCTAATGCAAGCTCATGAAATTTATGGTAATAAATGGGCTATGATTGCAAGGCTTTTTCCTGGACGTACAGATAATGGTGTCAAGAATCATTGGCATGTTGTAATGGCTAGAAATTGTAGACAACATTTTAGTTCTTACAGGAGATCATCGAGGAACCTCGCTCACTCACTTTCAATTGCTTCCTCCGCCCTTCCTACGCCCTCTCTTCTTCCCACAGCTCGCTCCCTCTCACGTCCCAATCACTTGCCTTTTCATCTTCTCCCCAGGCCTGGTGCGATTTTATATTACTATTTTCTTTTCTTTCTTTTTCTTTTTATTTATTACTTCATATGATCTATTAATATCATCCTATATCTTCAAATTATTGGGTCGACGCATTTGACATTATTCTTTTTGTAGTTCGTAAGAGAGTTGACTATAATTTTTAGATTTAAACATGAAAAAGGGTGATTTATTTTCTTTAACTTTTGTAAATGTTTTAACTCAAAAGGATTTTTGTAGTCCTCTAAAATTTAGCTTTTGAATTACTTACTTACGCGAAAACTTAAGTGTCCGTTTCAAACTGATGTTCTTTTTTATTGTTATTATTCTTAGTTTAAATAATATTTAGGGATTGAATGAGCTACACTTGTGTTTTGTGCAGTCCAGTCAGATATTTAATAATTAAAATATATATTTTCAAAATTTTCATTAAATTTAATTATTTTTTTTATAATGTTGAATAAGAGGACTACACTTTAATTAAAATTGGAACAGTCGATTTTTATGATTTTCAGTTTCAGATATGAAGAACATTTGAATGTAAATGGGGGTGACTCATTCGTATGCTGCTTTGACAATTTCTGTTTTTTTAAAGATGGAGTTTTCTTTAGATGTTCGATGGAATAGAAATGAAGGGACTTTTTTTTTTTCTTTGTCATTTTTCTTTATAATAAAATAAACTGAATGCAGTGACATATGTTTTATTTTAGCCTATTAATATTAATTCTAGCTATGGCATGTTTCTCTACTTTATTTTCTAATCTATTATTAAATGCGTTACAAAGATTGCTGTAAAAAAAAGTGTTATGAAATGGAGAATGGTTAATGGACAGCAAATTATGTACATATTTGGTTGGAATTAATTGCAGTGAAGTATTTACTTTAGCAAGGGATTTGAAGTAAGAGGGTGATTAAAATTGGATTAATTAGTTGTTGCAAGTTTCTAAGAGATGTTTTGTGTACTTAGGCTCAGAAACAAGCATCGAAATGGAAGTTATATCATCCTACAGCTGCAACAAAACGTGCTCCAATCATGAGAATCAAACTTGCAATATACATTATCGTCTACCATATATCATGACCGAAATGCAACAAAGGACAACCTACAATTACAACTCTCATTGCCAAATTCCAAAAGCATGGGATCACCATATTATTGGAAGCGAGGGATCATCATCAGTGAGCGAGGAAAACGGAGTTGGCAATTCAGACGGCACGGTGGTAGTCGAACCGGCGTTTATCGACTTTTTAGGAGTAGGAGGCAGATGAAAGGGTGTTTTGAAAACCCAAGGAAAAAAAGAAAAAGGAAAAGAAAAAGAAAAGGGTGGCTTCTTTATTATCATTATTTTTTTTTGGTTGCAAATTGCAATCATCAGAAGTGGCCTGATTGTGGGTGTGGTCCAGAGATTTTGAAGAGGCCATAACAAGTAATTGAGAGCAAAAGTAAAGAGGAGATGATTTGAGTTGGACTGTTGGAGTGGTGAAAAGATATGGCAGTCAGTGCCATTGAAAGCGCTTTATGAATATATATATATATATATAATCCCAAAACTCAAACCATCATTTTCTTCTTTTTCTGCACATAATGAATGTGATGGCCAGTGGCTTATATTCCCAAGATTATCCATTTCTTACACTGTTCATCATTTTTGATATCACCCATTGCACTACCTTATTAAAACTCGTCTTCATTATCAGCGGTTCAGGTTAAGTTTGAGAATCAAAATT TTTTTTTTAAAAAAAAATAAAAAAACATTACCAATAGGATGATGATGTATGTAAGTAGTACTAGAAAGTAGAAACCCCCCAAAGCCCTGCCTCTCGTTGTTGTTTCTGTATTATCATGCCCGGTTCTAAGTCCAAGGTACGCGGGAGAGGGCACTGGCGCCCGGCCGAGGACACCAAGCTGAAGGAACTCGTACGCCTTTACGGTCCTCAAAACTGGAACCTCATCGCCCAGAAACTGGAAGGACGATCTGGGAAGAGTTGTCGATTGAGATGGTTTAACCAACTGGACCCAAGGATTAACAGAAAAGCTTTCTCCGAAGAGGAAGAGGAGAGGCTAATGCAAGCTCATGAAATTTATGGTAATAAATGGGCTATGATTGCAAGGCTTTTTCCTGGACGTACAGATAATGGTGTCAAGAATCATTGGCATGTTGTAATGGCTAGAAATTGTAGACAACATTTTAGTTCTTACAGGAGATCATCGAGGAACCTCGCTCACTCACTTTCAATTGCTTCCTCCGCCCTTCCTACGCCCTCTCTTCTTCCCACAGCTCGCTCCCTCTCACGTCCCAATCACTTGCCTTTTCATCTTCTCCCCAGGCCTGGCTCAGAAACAAGCATCGAAATGGAAGTTATATCATCCTACAGCTGCAACAAAACGTGCTCCAATCATGAGAATCAAACTTGCAATATACATTATCGTCTACCATATATCATGACCGAAATGCAACAAAGGACAACCTACAATTACAACTCTCATTGCCAAATTCCAAAAGCATGGGATCACCATATTATTGGAAGCGAGGGATCATCATCAGTGAGCGAGGAAAACGGAGTTGGCAATTCAGACGGCACGGTGGTAGTCGAACCGGCGTTTATCGACTTTTTAGGAGTAGGAGGCAGATGAAAGGGTGTTTTGAAAACCCAAGGAAAAAAAGAAAAAGGAAAAGAAAAAGAAAAGGGTGGCTTCTTTATTATCATTATTTTTTTTTGGTTGCAAATTGCAATCATCAGAAGTGGCCTGATTGTGGGTGTGGTCCAGAGATTTTGAAGAGGCCATAACAAGTAATTGAGAGCAAAAGTAAAGAGGAGATGATTTGAGTTGGACTGTTGGAGTGGTGAAAAGATATGGCAGTCAGTGCCATTGAAAGCGCTTTATGAATATATATATATATATATAATCCCAAAACTCAAACCATCATTTTCTTCTTTTTCTGCACATAATGAATGTGATGGCCAGTGGCTTATATTCCCAAGATTATCCATTTCTTACACTGTTCATCATTTTTGATATCACCCATTGCACTACCTTATTAAAACTCGTCTTCATTATCAGCGGTTCAGGTTAAGTTTGAGAATCAAAATT ATGCCCGGTTCTAAGTCCAAGGTACGCGGGAGAGGGCACTGGCGCCCGGCCGAGGACACCAAGCTGAAGGAACTCGTACGCCTTTACGGTCCTCAAAACTGGAACCTCATCGCCCAGAAACTGGAAGGACGATCTGGGAAGAGTTGTCGATTGAGATGGTTTAACCAACTGGACCCAAGGATTAACAGAAAAGCTTTCTCCGAAGAGGAAGAGGAGAGGCTAATGCAAGCTCATGAAATTTATGGTAATAAATGGGCTATGATTGCAAGGCTTTTTCCTGGACGTACAGATAATGGTGTCAAGAATCATTGGCATGTTGTAATGGCTAGAAATTGTAGACAACATTTTAGTTCTTACAGGAGATCATCGAGGAACCTCGCTCACTCACTTTCAATTGCTTCCTCCGCCCTTCCTACGCCCTCTCTTCTTCCCACAGCTCGCTCCCTCTCACGTCCCAATCACTTGCCTTTTCATCTTCTCCCCAGGCCTGGCTCAGAAACAAGCATCGAAATGGAAGTTATATCATCCTACAGCTGCAACAAAACGTGCTCCAATCATGAGAATCAAACTTGCAATATACATTATCGTCTACCATATATCATGACCGAAATGCAACAAAGGACAACCTACAATTACAACTCTCATTGCCAAATTCCAAAAGCATGGGATCACCATATTATTGGAAGCGAGGGATCATCATCAGTGAGCGAGGAAAACGGAGTTGGCAATTCAGACGGCACGGTGGTAGTCGAACCGGCGTTTATCGACTTTTTAGGAGTAGGAGGCAGATGA MPGSKSKVRGRGHWRPAEDTKLKELVRLYGPQNWNLIAQKLEGRSGKSCRLRWFNQLDPRINRKAFSEEEEERLMQAHEIYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRSSRNLAHSLSIASSALPTPSLLPTARSLSRPNHLPFHLLPRPGSETSIEMEVISSYSCNKTCSNHENQTCNIHYRLPYIMTEMQQRTTYNYNSHCQIPKAWDHHIIGSEGSSSVSEENGVGNSDGTVVVEPAFIDFLGVGGR Homology
BLAST of Cmc05g0133111.1 vs. NCBI nr
Match: XP_008441713.1 (PREDICTED: transcription factor MYB44 isoform X1 [Cucumis melo] >KAA0032249.1 transcription factor MYB44 isoform X1 [Cucumis melo var. makuwa] >TYK17058.1 transcription factor MYB44 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 534.6 bits (1376), Expect = 4.7e-148 Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. NCBI nr
Match: XP_016899494.1 (PREDICTED: transcription factor MYB44 isoform X2 [Cucumis melo]) HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-145 Identity = 257/263 (97.72%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. NCBI nr
Match: XP_004138987.1 (transcription factor MYB117 [Cucumis sativus] >KGN61373.1 hypothetical protein Csa_006716 [Cucumis sativus]) HSP 1 Score: 481.9 bits (1239), Expect = 3.6e-132 Identity = 241/265 (90.94%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. NCBI nr
Match: XP_038890980.1 (transcription factor MYB105-like [Benincasa hispida]) HSP 1 Score: 370.2 bits (949), Expect = 1.5e-98 Identity = 194/270 (71.85%), Postives = 217/270 (80.37%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. NCBI nr
Match: XP_028073425.1 (transcription factor MYB105-like [Camellia sinensis]) HSP 1 Score: 231.1 bits (588), Expect = 1.1e-56 Identity = 139/280 (49.64%), Postives = 172/280 (61.43%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 4.3e-56 Identity = 116/195 (59.49%), Postives = 135/195 (69.23%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54 Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2) HSP 1 Score: 203.8 bits (517), Expect = 2.5e-51 Identity = 97/142 (68.31%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 4.1e-46 Identity = 83/112 (74.11%), Postives = 94/112 (83.93%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 7.0e-46 Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy TrEMBL
Match: A0A5A7SSP0 (Transcription factor MYB44 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00010 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148 Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy TrEMBL
Match: A0A1S3B420 (transcription factor MYB44 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485791 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148 Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy TrEMBL
Match: A0A1S4DU28 (transcription factor MYB44 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485791 PE=4 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145 Identity = 257/263 (97.72%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy TrEMBL
Match: A0A0A0LHV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132 Identity = 241/265 (90.94%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. ExPASy TrEMBL
Match: A0A7J7H0K7 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_015464 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56 Identity = 142/287 (49.48%), Postives = 173/287 (60.28%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 ) HSP 1 Score: 219.5 bits (558), Expect = 3.1e-57 Identity = 116/195 (59.49%), Postives = 135/195 (69.23%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 ) HSP 1 Score: 218.4 bits (555), Expect = 6.9e-57 Identity = 107/153 (69.93%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 ) HSP 1 Score: 214.9 bits (546), Expect = 7.6e-56 Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. TAIR 10
Match: AT3G29020.2 (myb domain protein 110 ) HSP 1 Score: 189.1 bits (479), Expect = 4.5e-48 Identity = 117/271 (43.17%), Postives = 153/271 (56.46%), Query Frame = 0
BLAST of Cmc05g0133111.1 vs. TAIR 10
Match: AT3G29020.1 (myb domain protein 110 ) HSP 1 Score: 186.8 bits (473), Expect = 2.2e-47 Identity = 85/125 (68.00%), Postives = 102/125 (81.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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