Cmc04g0101201.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0101201.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 17468341 .. 17469981 (-)
Sequence length	1641
RNA-Seq Expression	Cmc04g0101201.1
Synteny	Cmc04g0101201.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAGTTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGATCTATTTGACCAGTTACATGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTTGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTTCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCCGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTCGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGAGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAAGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCCGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTCAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTCCTTTACTCAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCCGCAGCACTTATTACCCGACAGTCCCCATTGCATCGAGATCTGGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGTAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGA

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAGTTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGATCTATTTGACCAGTTACATGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTTGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTTCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCCGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTCGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGAGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAAGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCCGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTCAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTCCTTTACTCAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCCGCAGCACTTATTACCCGACAGTCCCCATTGCATCGAGATCTGGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGTAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGA

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAGTTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGATCTATTTGACCAGTTACATGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTTGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTTCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCCGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTCGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGAGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAAGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCCGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTCAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCATGGATCATAAGAGCTTGAAATACTCCTTTACTCAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCCGCAGCACTTATTACCCGACAGTCCCCATTGCATCGAGATCTGGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGTAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLKYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLV

Homology

[Close]

BLAST of Cmc04g0101201.1 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1054.3 bits (2725), Expect = 3.6e-304
Identity = 527/546 (96.52%), Postives = 534/546 (97.80%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLV 547
            VSRCLV
Sbjct: 1120 VSRCLV 1125

[Close]

BLAST of Cmc04g0101201.1 vs. NCBI nr
Match: KAA0040689.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1053.9 bits (2724), Expect = 4.7e-304
Identity = 527/546 (96.52%), Postives = 533/546 (97.62%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 738  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 797

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 798  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 857

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 858  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 917

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDP KIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 918  KCEFWLKQVSFLGHVVSKAGVSVDPVKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 977

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Sbjct: 978  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLIVPDGSGSFVIYSDASKKGL 1037

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 1038 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1097

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 1098 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1157

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSISS
Sbjct: 1158 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1217

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1218 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1277

Query: 541  VSRCLV 547
            VSRCLV
Sbjct: 1278 VSRCLV 1283

[Close]

BLAST of Cmc04g0101201.1 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1052.0 bits (2719), Expect = 1.8e-303
Identity = 526/546 (96.34%), Postives = 532/546 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSRCLV 547
            VS+CLV
Sbjct: 1374 VSKCLV 1379

[Close]

BLAST of Cmc04g0101201.1 vs. NCBI nr
Match: KAA0046185.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1052.0 bits (2719), Expect = 1.8e-303
Identity = 527/546 (96.52%), Postives = 533/546 (97.62%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRLCIDYRELNKVTVKN+
Sbjct: 856  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCIDYRELNKVTVKNR 915

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 916  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 975

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 976  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1035

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGH+VSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1036 KCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1095

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Sbjct: 1096 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVLDGSGSFVIYSDASKKGL 1155

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 1156 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1215

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITRQ+PLHR
Sbjct: 1216 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHR 1275

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SS
Sbjct: 1276 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1335

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1336 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1395

Query: 541  VSRCLV 547
            VSRCLV
Sbjct: 1396 VSRCLV 1401

[Close]

BLAST of Cmc04g0101201.1 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1051.6 bits (2718), Expect = 2.4e-303
Identity = 525/546 (96.15%), Postives = 532/546 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTE EHEEHLR+VLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL E GQAVEFS+SS
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSS 1093

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1094 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1153

Query: 541  VSRCLV 547
            VS+CLV
Sbjct: 1154 VSKCLV 1159

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.2e-85
Identity = 162/403 (40.20%), Postives = 248/403 (61.54%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNKY 66
           +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSK 186
           APA F   MN + R  L+   +V++DDI+++  +  EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFS 246
           CEF  +  +FLGHV++  G+  +P KIEA+     P+   E+++FLGL GYYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIATPLTQLTRKRAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 306
            IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 366
           G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I  DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
            + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 5.4e-85
Identity = 158/402 (39.30%), Postives = 241/402 (59.95%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNKYP 67
           E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ ++YP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFSKC 187
           PA F   MN + R  L+   +V++DDI+I+  +  EH   +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENFSR 247
           EF  K  +FLGH+V+  G+  +P K++A+     P+   E+R+FLGL GYYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IATPLTQLTRKRAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG 307
           IA P+T   +KR      K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSLK 367
            VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I  DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

Query: 368 YSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           +    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 581 WLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.1e-84
Identity = 176/555 (31.71%), Postives = 301/555 (54.23%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++ G+T+F+K+DL+  YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+ K+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF    V F+G+ +S+ G +     I+ V    +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             DH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 QAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 957

Query: 541 WRNMKREVAEFVSRC 545
           W+ +++++ E+V  C
Sbjct: 960 WKGIRKQIQEYVQNC 957

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.1e-84
Identity = 176/555 (31.71%), Postives = 301/555 (54.23%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++ G+T+F+K+DL+  YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+ K+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF    V F+G+ +S+ G +     I+ V    +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             DH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 QAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 957

Query: 541 WRNMKREVAEFVSRC 545
           W+ +++++ E+V  C
Sbjct: 960 WKGIRKQIQEYVQNC 957

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.1e-84
Identity = 176/555 (31.71%), Postives = 301/555 (54.23%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++ G+T+F+K+DL+  YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+ K+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF    V F+G+ +S+ G +     I+ V    +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FMDHKSLKYSFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             DH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQSPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 QAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 957

Query: 541 WRNMKREVAEFVSRC 545
           W+ +++++ E+V  C
Sbjct: 960 WKGIRKQIQEYVQNC 957

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1054.3 bits (2725), Expect = 1.8e-304
Identity = 527/546 (96.52%), Postives = 534/546 (97.80%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLV 547
            VSRCLV
Sbjct: 1120 VSRCLV 1125

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy TrEMBL
Match: A0A5A7THE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00030 PE=4 SV=1)

HSP 1 Score: 1053.9 bits (2724), Expect = 2.3e-304
Identity = 527/546 (96.52%), Postives = 533/546 (97.62%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 738  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 797

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 798  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 857

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 858  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 917

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDP KIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 918  KCEFWLKQVSFLGHVVSKAGVSVDPVKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 977

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Sbjct: 978  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLIVPDGSGSFVIYSDASKKGL 1037

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 1038 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1097

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 1098 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1157

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFSISS
Sbjct: 1158 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1217

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1218 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1277

Query: 541  VSRCLV 547
            VSRCLV
Sbjct: 1278 VSRCLV 1283

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy TrEMBL
Match: A0A5A7TXM6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold376G00490 PE=4 SV=1)

HSP 1 Score: 1052.0 bits (2719), Expect = 8.7e-304
Identity = 527/546 (96.52%), Postives = 533/546 (97.62%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD SMRLCIDYRELNKVTVKN+
Sbjct: 856  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCIDYRELNKVTVKNR 915

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 916  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 975

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 976  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1035

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGH+VSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1036 KCEFWLKQVSFLGHMVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1095

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Sbjct: 1096 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVLDGSGSFVIYSDASKKGL 1155

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 1156 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1215

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITRQ+PLHR
Sbjct: 1216 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHR 1275

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQAVEFS+SS
Sbjct: 1276 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1335

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1336 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1395

Query: 541  VSRCLV 547
            VSRCLV
Sbjct: 1396 VSRCLV 1401

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1052.0 bits (2719), Expect = 8.7e-304
Identity = 526/546 (96.34%), Postives = 532/546 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL EAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSRCLV 547
            VS+CLV
Sbjct: 1374 VSKCLV 1379

[Close]

BLAST of Cmc04g0101201.1 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1051.6 bits (2718), Expect = 1.1e-303
Identity = 525/546 (96.15%), Postives = 532/546 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRLGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLR GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIY KTE EHEEHLR+VLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKPVSFLGHVVSKAGVSVDPAKIEAVTGSTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTG TRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRK APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSELAAVVFALKIWRHYLYGEKIQIFMDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD ELAAVVFALKIWRHYLYGEKIQIF DHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYSFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQSPLHR 420
            KY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ+PLHR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLVEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL E GQAVEFS+SS
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSS 1093

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1094 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1153

Query: 541  VSRCLV 547
            VS+CLV
Sbjct: 1154 VSKCLV 1159

[Close]

BLAST of Cmc04g0101201.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-24
Identity = 57/131 (43.51%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 162 HLRIVLQTLRDNKLYAKFSKCEFWLKPVSFLG--HVVSKAGVSVDPAKIEAVTGSTRPST 221
           HL +VLQ    ++ YA   KC F    +++LG  H++S  GVS DPAK+EA+ G   P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKRAPFVWSKACEDSFQNLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPDGSGSFV 291
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc04g0101201.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	3.6e-304	96.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040689.1	4.7e-304	96.52	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	1.8e-303	96.34	pol protein [Cucumis melo var. makuwa]	[more]
KAA0046185.1	1.8e-303	96.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	2.4e-303	96.15	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0101201.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	3.2e-85	40.20	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	5.4e-85	39.30	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	2.1e-84	31.71	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.1e-84	31.71	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.1e-84	31.71	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0101201.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	1.8e-304	96.52	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7THE6	2.3e-304	96.52	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7TXM6	8.7e-304	96.52	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5D3BPI1	8.7e-304	96.34	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7T190	1.1e-303	96.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]

BLAST of Cmc04g0101201.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.9e-24	43.51	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 496..545 e-value: 4.8E-13 score: 49.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 1.7E-84 score: 284.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..296 e-value: 1.9E-29 score: 103.5
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 1.4E-32 score: 112.1
None	No IPR available	GENE3D	1.10.340.70		coord: 462..546 e-value: 4.2E-15 score: 57.7
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 1.7E-84 score: 284.4
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..409
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..409
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..405 e-value: 4.85018E-55 score: 179.226
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.85385E-93 score: 281.021
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.2E-27 score: 96.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 9.757074
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0101201	Cmc04g0101201	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0101201.1-exon	Cmc04g0101201.1-exon-CMiso1.1chr04:17468341..17469981	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0101201.1-cds	Cmc04g0101201.1-cds-CMiso1.1chr04:17468341..17469981	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0101201.1	Cmc04g0101201.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding