Cmc03g0084121.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc03g0084121.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr03: 28500179 .. 28505349 (-)
Sequence length4388
RNA-Seq ExpressionCmc03g0084121.1
SyntenyCmc03g0084121.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGCTACATTTTCTTTTTCCATGTCTCAATCAGAGTAACACCAAGGTGTCTAGCTTAGTTTAGTCCAATTCTTTTTGGAATTTTCCTCGGATGGTTTTTACGATCCAAATTGATCAAACTTGTTTGGTTCAATTTTGAAACGTAATTGAATGAATATTAAACTTTTTTGTTAAGGCAAGCTGACGTTTGTAGCTGCTGTATTGATCTGTTCAGTATCAATCATCTCAAGATATTGGGCTAACAGAAAGTAGGATTTGGAAACTCTACAATCGGCCAGTTATAAGGTGTACGGCCCCAATTTGACTCATTGTACTAGGAATTCGTTGGGGGCAGACCAGCGAAGGGCCATGGCTTCCTGTTGCTTATCTGGTCGACAAATGACAGAAAGGTCATGATCCCATAAAGAGATTTGAAAAATAAAAAGATATGGGTAGAGTGAATCTGAAGTCAAATATCATAATTTTAGTGGCCACTTTGCTCTTGTAGTCAGTGGATCAAGAAACTAATGTTATCCATTCATCAACTCATCCTTGTTTGGTTTAATTATGATTGTTTCTGTTGTTCAGAATTTAGTATCTGTTTTAATCTTTTCTTTATTTTTCATCTTGTCTTCTGCTCATGGGGTTCGGTTAAACCACTTTAGATGATTGAATCTTCTAAATGTGTTAAGGAAAACAGTTAGATGGAAAGAAAATAAGGATGAGGGAATTGAGCTTCGATTCATGTGGAATAAGTTTACAGAAAGCAAGTTTAAAAATCTGTGCGCTGTTTTTGATGGGTTATGCATGTTAAGTGTTTGATTAAAGTTCTGTTATAGAGCCTTGTGTTATTTTTGCTTTATATCAATTGATTAACCATTTGATGAGATAAATGTGGTCACCAGAAGCTCAAATTCTGAGAATATATAATATTATCTTTTTGAGCCCCAACAGCCATCACCTTTTTCTGTGGGGGCTTCCTTGATGGATGGCAGAGCAAGGATCAGCCAGTTGTCTCTTTCATTGATCCTAGAAAAATGGCATTTCATTCATCTTTTGGCAATGAAATTCAATGAGCATATTGGATTTTCTTATTAAAATGTGCACAGGCACCTTAGTCACACAGTATATACACGACTGACTAATAAAAGCATTGCGATTGTTCACTTGTTCACTGTTTTCTTTGTTTGTAGGCTTAGGGTGATTTTGAAAAGACTTAAAGCACTTCTTTTAGTGTGAGGGGGATTCATCAGGTGCGTTTGATATATGGCAATGCAATATTAATCATTATCCTAAAAAAAAAAAAAGATGATCCTCCTACTCCTCACATGAAAAAGGTAGCTTTTCTGTCAGTTGCCCACACCTCTACATTTTATATCAATGTTGTTTAATATTAAAGATTGATACTTTTAGAAATAGCAAAATGTTAAAAGTATTTAAAAAATATAGCAAAATTTCTTTTTAGTCCATTCAATTTTTTAATTTTTTTTTAATTTTTTTTTTTTTGCTTACTTTGTGAAGAGTTTTTTTTTTTTTTTTCCAACTGTGATTGAAGGCATTGATACCTTTTTTGTACTTTTTTAAACGTATATTTTATAATTTATGTAGAGGTGGGTAATTGGATTATGGTTATCAATATTTATATGAAGTCTAAGGTATTATCTCACACCCCACACCCTTTTGAGCCCCATAAACTCTCTTTTCAGAGCTTTCACTTGTTTCGATATATTTAGAAATGGTTCATCACTTTTCAACTTGTCTATTTATTGTAGGGACTTTGCCCCCTGGTATCTTAAGCAATGTTCTTGGGCAATTACTCCCACACTTTTATACTTTCTCAATATCATTTTGATCCTTTTAGGAAGTTTTATATATAATGGGGTAACGTCTATTGGAAAATTATTTACTGTCTCGTAACCATAAACGAGACATAAAAAACTTCAAAACAAGAAATGGGCGCGGTAGAGAAAAAAATCTTCAGAATTTTAAGACAATTATTGAATTTTCTCACCTTTTGTCAAACTTATGTGAGAGCTCTGGTCCCAACGTTTATGTGGTTTTTGTCTGGTTTATAAATGATTCAAAAAGACGAAAAAGAGAGAGTAGAGCTGGCAGTAGAGGAGTATTTGTCTATTCAATTTTGGATGATTGTTTGATTTAACCTATGCTCATGACCACTCAATTGGTAAAGAGATCATCAGGTCGATGATAGATTCGTCACATTTTCCTTTCTTTTGAAGGTTAGTAGATCAATCAACTTTTCTTGTGTCATTTTCTATACCCTTATCTGCTGAATTCCTTACCCCAGTTGTAAAATCCAAAATGTTAATGATGAACTCTCTTCAAATCAGAGCTTCTTTTTCCACATCATTAGCTTTTGTTCAAGGGTAATGAGATTCAATAACCATTTCTTTGTACAAACGTACATCTAAATCTAATATTACACAGTTGGGACTATCCCCCTATTCAAATGAAATAAATCCAAATCATCCAAAAAAAAAGAACATGTCAGTTCAAACACCTTAACTTAAGTGCATCTTAAGCTATAATCATCTTTATATACCATACTGGTATACTCAACCGTTCAACTCTGGTTAATCACGTACTAAACTCTTATTCTTTTATATCTTTTTGGATTAGAGTAAAATACACAAAAAGCGGTGCATTTAAGTATTATTCTTAAAACACCTCTTTTAAGTTACATTATCAAAAAATCATTGAAAGGGTCGGTGCACACACAGTATATATATCAAACCGGACCTTCTGGATTGATTTGCTATCTCTTTTTGTCTATATACACGTACATACCACGCACATAAATGCAGAAAAAGCAAAGAGGCTGAATAATTTTTAATAAAGAAATAGAATATGACTTATGAACAAAATGTACCCGCTGTATATGCTCTTTAACACTTGAGCCTTTCCTCTTTTAATATTGAATTCTTGCAATGAGCAATTGCTGCTTGAATTGCTGCCTGCAACTCCTCCATTGTGCTATCACTATTGGTGGAAGGAGGAAGCGTTGGAGTAGTAAGGAGGACACCACTATTGGTTGGAGATGTTCTCATGGAAACTGGGGCTGAGAAGAACTCGCCTCTTCTTCCTCGCTTCTTTCTCAACCTTAAATTACCTGAAAATGAATTATACTGTCTGTGTAGTTGCATATCATCTCTTTTCCCTCTCAAGTGTAGAAATGGCGTCACCATTCTTGCATATCTCTTCAGTACATTGCTCAAGTTGAATCCCAACTTCCTTTTATCCTGTTCTACTTTATTTTCTTGGTCTTCAACGTCAGACCTCTTTCTCCACCTTAAACCGAGCAAGGAGAAAGATTTGGACTTAGGTTTTTTTCTTGTATCATTACTGTTGTTTTGGCAGTGTTCATTGCGCTTGCGATTGATGAAGCTGCTACTTTCTTTCTTGGGCTCCTTTTCACTTATTAGGTCTCTAATGGGAAGGGTATAGCTTTCCATGGAGTTGGTTGAGCATCGGGGAGGGACTGGAAGATGAGAGAGGAGGTGAAGAGGAAGCAAATGGCCATGGAAGAAGATGTCATCTGCTGGCGACAAATCAATAGTGAAGGAAGGTGAGGTTTTGGCTTTGTCTGTGAAGGAAGTTTGAAGAGAAACTGAGAAGGAAAATTCATGAGAAGGAGATGAAGATGCTGAATGAGGAGAAGAGGAATTAGCTGGCAATTGTTGCTTCTCCAATTGCCTTTCTTTGTCTTCTAGATGCTGATGAATGTCCATAACCCAAACAAGAAAGGTTTTGCTGACAGACCAATTGGGCTGCTAATTCTGAATCTCAAAATCCCACTTCAAGACTTCAGTTTTAAGAACATTATCATAGCTTTATGAAGGGATAAGAAGATTAGAGGGTAGAAAAGGAGAGTGGAAGAGGGGGGGGGGGGGGGGGGTCTGGCCTTTTTGCCTCTCAGCACTTGCTTAAATTAAATTCTTATTCTTCTTTTCCTTTTCTTTTTTGGGGGCAGCACGTGTCGAGGATTGGTGGGTCCTTGTCAAATCTTACAGCTATTGAGAGTACAGATTTGGGAAAGAAAAATCCAACGAACACCCAAGAAAATTTCCCACAAAAACCCAATAACCTTTACAAGGGGGGGTACTGTTTTTTGGTATTTGTTGCATCATGGATCTTTCCTAGGAAAGTATATGACATTAATCATGAATTAAACTCCCTTTCTCAAAAGGAAACTTCGAAGAACTCCTCATATTTCATTGCTTCTCTATAGATCCTTTTCCTTTTGCTATAAGATGCATTGAATGAGACTATCCATATATCTATAATTGATCGGTATTTTTAAGCAATTAGGTCCCAACTTTGCATGGAAACAAAATACTTGCAATCTCTTATCTAATCATGATGACTGTATGATTTACAAAAATTAGGTAAGGTTTTGACTTTCTATTGACGCAAGTTATTAAATAATTGAATTGTGTGTGTTGATGATATTATGATCATATGATGTACTAATTTATAATATGTCCTTTTAAGGAGAAATTCATATGCCTTTAATAAGTATTTCACTGAAATCTCAAAATGGTGTACTGTCAGACGCCAGTGACTTAAAATAAAAAATTGGACCGAAACACTTGTTTCATGTCTCACTTTTCATCCAAAGTTTTAACATATTCTATTTTAATAGTAGTTTTGTTGTTTGGTCTGAGAAAATTGGCATAGAGGAATGAGCTGGCTGGCTAGAGATTTCAGAGGCAATACATTGCGGGCGGTTGCAGTTTTATTTATTACAGATAGCAAGTAAAAGTGCTTGAAGCCAAAGTCGTCCTGGAAGGTTCAAAAGAGTTGGAGGCTCTTCTGAAAGGGTAGAAATCTCCGATCCTGGTGATTGTGGAATCAGATACGCTTGAACTTAATCTTCTCAACAGTTCAGATTCGGACCTTTCAAAAGTCTCTTCTTTCGTTGAAGAGTCACGCTCTCTTGCTTCCTTGTGAATGTTATTATGGCTTTTGTAAAATTCCATGAGAGGGAAACAAAGTTGTCAATGACAGCTTTGACTTTTTTTCTTCAATTGTTTCTTTGGTTTGGTCTGGCATCAGTCTCGACTCTCATTCTTGAGAGGGTCTAACGTTGTTTTTGTCAACCTAAATTTTTTATGTACAGAAAGAATTTAGATATTTTCTAAATAAATCACAAAGTTCAAACCCTAAAAAAA

mRNA sequence

TTAGCTACATTTTCTTTTTCCATGTCTCAATCAGAGTAACACCAAGGTGTCTAGCTTAGTTTAGTCCAATTCTTTTTGGAATTTTCCTCGGATGGTTTTTACGATCCAAATTGATCAAACTTGTTTGGTTCAATTTTGAAACGTAATTGAATGAATATTAAACTTTTTTGTTAAGGCAAGCTGACGTTTGTAGCTGCTGTATTGATCTGTTCAGTATCAATCATCTCAAGATATTGGGCTAACAGAAAGTAGGATTTGGAAACTCTACAATCGGCCAGTTATAAGGTGTACGGCCCCAATTTGACTCATTGTACTAGGAATTCGTTGGGGGCAGACCAGCGAAGGGCCATGGCTTCCTGTTGCTTATCTGGTCGACAAATGACAGAAAGGCTTAGGGTGATTTTGAAAAGACTTAAAGCACTTCTTTTAGTGTGAGGGGGATTCATCAGGTGCGTTTGATATATGGCAATGCAATATTAATCATTATCCTAAAAAAAAAAAAAGATGATCCTCCTACTCCTCACATGAAAAAGGTAGCTTTTCTGTCAGTTGCCCACACCTCTACATTTTATATCAATGTTGTTTAATATTAAAGATTGATACTTTTAGAAATAGCAAAATGTTAAAAGTATTTAAAAAATATAGCAAAATTTCTTTTTAGTCCATTCAATTTTTTAATTTTTTTTTAATTTTTTTTTTTTTGCTTACTTTGTGAAGAGTTTTTTTTTTTTTTTTCCAACTGTGATTGAAGGCATTGATACCTTTTTTGTACTTTTTTAAACGTATATTTTATAATTTATGTAGAGGTGGGTAATTGGATTATGGTTATCAATATTTATATGAAGTCTAAGGTATTATCTCACACCCCACACCCTTTTGAGCCCCATAAACTCTCTTTTCAGAGCTTTCACTTGTTTCGATATATTTAGAAATGGTTCATCACTTTTCAACTTGTCTATTTATTGTAGGGACTTTGCCCCCTGGTATCTTAAGCAATGTTCTTGGGCAATTACTCCCACACTTTTATACTTTCTCAATATCATTTTGATCCTTTTAGGAAGTTTTATATATAATGGGGTAACGTCTATTGGAAAATTATTTACTGTCTCGTAACCATAAACGAGACATAAAAAACTTCAAAACAAGAAATGGGCGCGGTAGAGAAAAAAATCTTCAGAATTTTAAGACAATTATTGAATTTTCTCACCTTTTGTCAAACTTATGTGAGAGCTCTGGTCCCAACGTTTATGTGGTTTTTGTCTGGTTTATAAATGATTCAAAAAGACGAAAAAGAGAGAGTAGAGCTGGCAGTAGAGGAGTATTTGTCTATTCAATTTTGGATGATTGTTTGATTTAACCTATGCTCATGACCACTCAATTGGTAAAGAGATCATCAGGTCGATGATAGATTCGTCACATTTTCCTTTCTTTTGAAGGTTAGTAGATCAATCAACTTTTCTTGTGTCATTTTCTATACCCTTATCTGCTGAATTCCTTACCCCAGTTGTAAAATCCAAAATGTTAATGATGAACTCTCTTCAAATCAGAGCTTCTTTTTCCACATCATTAGCTTTTGTTCAAGGGTAATGAGATTCAATAACCATTTCTTTGTACAAACGTACATCTAAATCTAATATTACACAGTTGGGACTATCCCCCTATTCAAATGAAATAAATCCAAATCATCCAAAAAAAAAGAACATGTCAGTTCAAACACCTTAACTTAAGTGCATCTTAAGCTATAATCATCTTTATATACCATACTGGTATACTCAACCGTTCAACTCTGGTTAATCACGTACTAAACTCTTATTCTTTTATATCTTTTTGGATTAGAGTAAAATACACAAAAAGCGGTGCATTTAAGTATTATTCTTAAAACACCTCTTTTAAGTTACATTATCAAAAAATCATTGAAAGGGTCGGTGCACACACAGTATATATATCAAACCGGACCTTCTGGATTGATTTGCTATCTCTTTTTGTCTATATACACGTACATACCACGCACATAAATGCAGAAAAAGCAAAGAGGCTGAATAATTTTTAATAAAGAAATAGAATATGACTTATGAACAAAATGTACCCGCTGTATATGCTCTTTAACACTTGAGCCTTTCCTCTTTTAATATTGAATTCTTGCAATGAGCAATTGCTGCTTGAATTGCTGCCTGCAACTCCTCCATTGTGCTATCACTATTGGTGGAAGGAGGAAGCGTTGGAGTAGTAAGGAGGACACCACTATTGGTTGGAGATGTTCTCATGGAAACTGGGGCTGAGAAGAACTCGCCTCTTCTTCCTCGCTTCTTTCTCAACCTTAAATTACCTGAAAATGAATTATACTGTCTGTGTAGTTGCATATCATCTCTTTTCCCTCTCAAGTGTAGAAATGGCGTCACCATTCTTGCATATCTCTTCAGTACATTGCTCAAGTTGAATCCCAACTTCCTTTTATCCTGTTCTACTTTATTTTCTTGGTCTTCAACGTCAGACCTCTTTCTCCACCTTAAACCGAGCAAGGAGAAAGATTTGGACTTAGGTTTTTTTCTTGTATCATTACTGTTGTTTTGGCAGTGTTCATTGCGCTTGCGATTGATGAAGCTGCTACTTTCTTTCTTGGGCTCCTTTTCACTTATTAGGTCTCTAATGGGAAGGGTATAGCTTTCCATGGAGTTGGTTGAGCATCGGGGAGGGACTGGAAGATGAGAGAGGAGGTGAAGAGGAAGCAAATGGCCATGGAAGAAGATGTCATCTGCTGGCGACAAATCAATAGTGAAGGAAGGTGAGGTTTTGGCTTTGTCTGTGAAGGAAGTTTGAAGAGAAACTGAGAAGGAAAATTCATGAGAAGGAGATGAAGATGCTGAATGAGGAGAAGAGGAATTAGCTGGCAATTGTTGCTTCTCCAATTGCCTTTCTTTGTCTTCTAGATGCTGATGAATGTCCATAACCCAAACAAGAAAGGTTTTGCTGACAGACCAATTGGGCTGCTAATTCTGAATCTCAAAATCCCACTTCAAGACTTCAGTTTTAAGAACATTATCATAGCTTTATGAAGGGATAAGAAGATTAGAGGGTAGAAAAGGAGAGTGGAAGAGGGGGGGGGGGGGGGGGGTCTGGCCTTTTTGCCTCTCAGCACTTGCTTAAATTAAATTCTTATTCTTCTTTTCCTTTTCTTTTTTGGGGGCAGCACGTGTCGAGGATTGGTGGGTCCTTGTCAAATCTTACAGCTATTGAGAGTACAGATTTGGGAAAGAAAAATCCAACGAACACCCAAGAAAATTTCCCACAAAAACCCAATAACCTTTACAAGGGGGGGTACTGTTTTTTGGTATTTGTTGCATCATGGATCTTTCCTAGGAAAGTATATGACATTAATCATGAATTAAACTCCCTTTCTCAAAAGGAAACTTCGAAGAACTCCTCATATTTCATTGCTTCTCTATAGATCCTTTTCCTTTTGCTATAAGATGCATTGAATGAGACTATCCATATATCTATAATTGATCGGTATTTTTAAGCAATTAGGTCCCAACTTTGCATGGAAACAAAATACTTGCAATCTCTTATCTAATCATGATGACTGTATGATTTACAAAAATTAGGTAAGGTTTTGACTTTCTATTGACGCAAGTTATTAAATAATTGAATTGTGTGTGTTGATGATATTATGATCATATGATGTACTAATTTATAATATGTCCTTTTAAGGAGAAATTCATATGCCTTTAATAAGTATTTCACTGAAATCTCAAAATGGTGTACTGTCAGACGCCAGTGACTTAAAATAAAAAATTGGACCGAAACACTTGTTTCATGTCTCACTTTTCATCCAAAGTTTTAACATATTCTATTTTAATAGTAGTTTTGTTGTTTGGTCTGAGAAAATTGGCATAGAGGAATGAGCTGGCTGGCTAGAGATTTCAGAGGCAATACATTGCGGGCGGTTGCAGTTTTATTTATTACAGATAGCAAGTAAAAGTGCTTGAAGCCAAAGTCGTCCTGGAAGGTTCAAAAGAGTTGGAGGCTCTTCTGAAAGGGTAGAAATCTCCGATCCTGGTGATTGTGGAATCAGATACGCTTGAACTTAATCTTCTCAACAGTTCAGATTCGGACCTTTCAAAAGTCTCTTCTTTCGTTGAAGAGTCACGCTCTCTTGCTTCCTTGTGAATGTTATTATGGCTTTTGTAAAATTCCATGAGAGGGAAACAAAGTTGTCAATGACAGCTTTGACTTTTTTTCTTCAATTGTTTCTTTGGTTTGGTCTGGCATCAGTCTCGACTCTCATTCTTGAGAGGGTCTAACGTTGTTTTTGTCAACCTAAATTTTTTATGTACAGAAAGAATTTAGATATTTTCTAAATAAATCACAAAGTTCAAACCCTAAAAAAA

Coding sequence (CDS)

ATGGAAACTGGGGCTGAGAAGAACTCGCCTCTTCTTCCTCGCTTCTTTCTCAACCTTAAATTACCTGAAAATGAATTATACTGTCTGTGTAGTTGCATATCATCTCTTTTCCCTCTCAAGTGTAGAAATGGCGTCACCATTCTTGCATATCTCTTCAGTACATTGCTCAAGTTGAATCCCAACTTCCTTTTATCCTGTTCTACTTTATTTTCTTGGTCTTCAACGTCAGACCTCTTTCTCCACCTTAAACCGAGCAAGGAGAAAGATTTGGACTTAGGTTTTTTTCTTGTATCATTACTGTTGTTTTGGCAGTGTTCATTGCGCTTGCGATTGATGAAGCTGCTACTTTCTTTCTTGGGCTCCTTTTCACTTATTAGGTCTCTAATGGGAAGGGTATAG

Protein sequence

METGAEKNSPLLPRFFLNLKLPENELYCLCSCISSLFPLKCRNGVTILAYLFSTLLKLNPNFLLSCSTLFSWSSTSDLFLHLKPSKEKDLDLGFFLVSLLLFWQCSLRLRLMKLLLSFLGSFSLIRSLMGRV
Homology
The following BLAST results are available for this feature:
BLAST of Cmc03g0084121.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0084121.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0084121.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0084121.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc03g0084121Cmc03g0084121gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084121.1-exonCmc03g0084121.1-exon-CMiso1.1chr03:28500179..28504177exon
Cmc03g0084121.1-exonCmc03g0084121.1-exon-CMiso1.1chr03:28504961..28505349exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084121.1-three_prime_utrCmc03g0084121.1-three_prime_utr-CMiso1.1chr03:28500179..28501905three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084121.1-cdsCmc03g0084121.1-cds-CMiso1.1chr03:28501906..28502304CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084121.1-five_prime_utrCmc03g0084121.1-five_prime_utr-CMiso1.1chr03:28502305..28504177five_prime_UTR
Cmc03g0084121.1-five_prime_utrCmc03g0084121.1-five_prime_utr-CMiso1.1chr03:28504961..28505349five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc03g0084121.1Cmc03g0084121.1-proteinpolypeptide