Cmc03g0082801.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGCTTTTAGTGGCCCTTCTGAAGATGAACATCAGAAAAAAAATTATTCTTTTACTTTTACTATAAGAAAGTGGGTTTTGTTGGTCTAATAATTTTTAAATCTCTCAGTTGCAATTAAAATAATTCATTTCCTTCTTCTCTCCTCTTTTTTTAATGTCAATAATCTCATTTCTTCACTGTGGAGGATCGCCAGGGATGTACCGCCATTCTTATTATATTCTGTAATTATTGCTTTCCCATTACTCTCACAGGTTCTTCACTGATTGCTCCGGCAAACCTTTTTATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTATTGCTGATAATCAGATAGATATGAAGATTCAGTGTGATGTTTGTGAAAAAGGGGATGCGGCGGTGTTCTGCACGGCGGATGAGGCGGCGCTCTGTGATCTTTGTGATCACCGTGTCCACCATGCTAATAAGCTTGCTTCGAAGCACCGACGGTTTTCTCTGCTCCGTCCTGATGCAGGGGAGGCTCCCGTGTGCGATGTGTGCAAGGTATTTTGCCGAGATCTGATTTTTGTTGATTTTTTGAGGATATGGGTTTTGCTCTGTTTTTGTTTGTTTGTTTGTTTTTGTGTTTTTTTTATGTGGGGCTTTTGAATCTGGTTGTGAAGGAGCGGCGAGGGTTTTTGTTTTGTCAACAAGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATTCATTCCGCTAATGAACTCACTAAGAAGCACGATAGGTTTCTTCTAACTGGGATTAAGCTTTCCGCCAGCGCTGCTCTGTATGCGCCACCTCCATCCGGCGAGAAACAAATTGAGAGTGGTGGTCGTGTTGTTTCTGCATCTAAGTCAAAGGGGTCTGTCAAGAAAGTGGCTGCGGTTTCCAAGGTTCCAACGATATGCACTCCAAATGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCGGCAGTAGTGAACAAGGGGGGTGGAGGTCAGATTGCGACCGGCGGAGGTGGATCGGCGAGTAGCATATCGGAGTATTTGATGGAGACGCTTCCTGGGTGGCACTTCGAAGATTTTCTTGATTCTTCTGTCTCTCCCCCTTTTGTGGAGGTTGGTTTGTCACTGTTACTGTTACTATTTGTATGTGAAGTTGATAATCATAAAGTTTGAGGAATGTTTTTATGTTCTCTTTTTTTGCAGTTTGATGATGGGATAGGATTTCCATTTGTGGAAGGTGATTTGAATGGTTGTTTTTCATCATCGGAACGTTTAGAGCTTTGGGTCCCTCAGGGGCCACCAGCTGCGCTGTATAATTCAGGATTAATGATGAATAATGGATTGAAGGACACAAAGGAATTGGGGGTAAATTCATCAAAAGTCAATCGAGAGTGGACTGATGATGGTTTCACTGTGCCACAGATCACAAGTACAGCCCCATCTTCAGGCTTTAAGAGATCCAGACCTTTTTGGTAAAAATTGGCATAGCAATCAATAACCAAATACACTTCCATTTCCAGTTTCAAATCCTTTATTCCTTCCATTCTCAAGAAAGAAAAGAAAACCTCGTTTCTTCTCCCCGTTTTTCCCCTTCCGGCTTCTTTTACTTTTTTTGTTTCATCTGTAATTTAATGGGTTTCTTTTACATTTTGTTTAGGTTTCACCTCATGTACTTTAATAGGTACATTCTTCTTCTTGGGGTTTCTGTTAATTAGTTCTTTTCCTGAAAAAAAAAAAAAAAGGTTCAGATGTAATATAATGGGCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTAGGTTCTTTTACTTTAAGTTCTGTCATAATCTTTTGTTCGATGGGGTTTTTCCTTTTTTGCTTCTATTTTTTTGTTGAAGTTGCACCTGTATATCTTTGACTAAACTTCTTCTCTTGTTGGTTCTTGTTTAGTCTCTCGATGGTTGTGGGTCGTTCTATAAAACCCAACTATTTGTCATTGTAAATACCTTCCAATGAGTTTTTGGAGTGAATAATGGCTTGAACTTGAGTCAATAAAAAGTTCTTTTTTTTTCTTTTTTGTTGTGGATGGGGAGGGGGTTAAGAGGGATGTATCTTGTTGGTTTTTTGTGTAGTGGAAGGTAGTGGATTTCCAAGCTTGCAGAGTTGGGCAACAATGGCGGCTTTCTGTTAATTATCTGTTTAACTCATATAAATATAAATATATGTATTATATATTTTGTGTTT ATAGCTTTTAGTGGCCCTTCTGAAGATGAACATCAGAAAAAAAATTATTCTTTTACTTTTACTATAAGAAAGTGGGTTTTGTTGGTCTAATAATTTTTAAATCTCTCAGTTGCAATTAAAATAATTCATTTCCTTCTTCTCTCCTCTTTTTTTAATGTCAATAATCTCATTTCTTCACTGTGGAGGATCGCCAGGGATGTACCGCCATTCTTATTATATTCTGTAATTATTGCTTTCCCATTACTCTCACAGGTTCTTCACTGATTGCTCCGGCAAACCTTTTTATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTATTGCTGATAATCAGATAGATATGAAGATTCAGTGTGATGTTTGTGAAAAAGGGGATGCGGCGGTGTTCTGCACGGCGGATGAGGCGGCGCTCTGTGATCTTTGTGATCACCGTGTCCACCATGCTAATAAGCTTGCTTCGAAGCACCGACGGTTTTCTCTGCTCCGTCCTGATGCAGGGGAGGCTCCCGTGTGCGATGTGTGCAAGCGGCGAGGGTTTTTGTTTTGTCAACAAGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATTCATTCCGCTAATGAACTCACTAAGAAGCACGATAGGTTTCTTCTAACTGGGATTAAGCTTTCCGCCAGCGCTGCTCTGTATGCGCCACCTCCATCCGGCGAGAAACAAATTGAGAGTGGTGGTCGTGTTGTTTCTGCATCTAAGTCAAAGGGGTCTGTCAAGAAAGTGGCTGCGGTTTCCAAGGTTCCAACGATATGCACTCCAAATGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCGGCAGTAGTGAACAAGGGGGGTGGAGGTCAGATTGCGACCGGCGGAGGTGGATCGGCGAGTAGCATATCGGAGTATTTGATGGAGACGCTTCCTGGGTGGCACTTCGAAGATTTTCTTGATTCTTCTGTCTCTCCCCCTTTTGTGGAGTTTGATGATGGGATAGGATTTCCATTTGTGGAAGGTGATTTGAATGGTTGTTTTTCATCATCGGAACGTTTAGAGCTTTGGGTCCCTCAGGGGCCACCAGCTGCGCTGTATAATTCAGGATTAATGATGAATAATGGATTGAAGGACACAAAGGAATTGGGGGTAAATTCATCAAAAGTCAATCGAGAGTGGACTGATGATGGTTTCACTGTGCCACAGATCACAAGTACAGCCCCATCTTCAGGCTTTAAGAGATCCAGACCTTTTTGGTAAAAATTGGCATAGCAATCAATAACCAAATACACTTCCATTTCCAGTTTCAAATCCTTTATTCCTTCCATTCTCAAGAAAGAAAAGAAAACCTCGTTTCTTCTCCCCGTTTTTCCCCTTCCGGCTTCTTTTACTTTTTTTGTTTCATCTGTAATTTAATGGGTTTCTTTTACATTTTGTTTAGGTTTCACCTCATGTACTTTAATAGGTACATTCTTCTTCTTGGGGTTTCTGTTAATTAGTTCTTTTCCTGAAAAAAAAAAAAAAAGGTTCAGATGTAATATAATGGGCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTAGGTTCTTTTACTTTAAGTTCTGTCATAATCTTTTGTTCGATGGGGTTTTTCCTTTTTTGCTTCTATTTTTTTGTTGAAGTTGCACCTGTATATCTTTGACTAAACTTCTTCTCTTGTTGGTTCTTGTTTAGTCTCTCGATGGTTGTGGGTCGTTCTATAAAACCCAACTATTTGTCATTGTAAATACCTTCCAATGAGTTTTTGGAGTGAATAATGGCTTGAACTTGAGTCAATAAAAAGTTCTTTTTTTTTCTTTTTTGTTGTGGATGGGGAGGGGGTTAAGAGGGATGTATCTTGTTGGTTTTTTGTGTAGTGGAAGGTAGTGGATTTCCAAGCTTGCAGAGTTGGGCAACAATGGCGGCTTTCTGTTAATTATCTGTTTAACTCATATAAATATAAATATATGTATTATATATTTTGTGTTT ATGAAGATTCAGTGTGATGTTTGTGAAAAAGGGGATGCGGCGGTGTTCTGCACGGCGGATGAGGCGGCGCTCTGTGATCTTTGTGATCACCGTGTCCACCATGCTAATAAGCTTGCTTCGAAGCACCGACGGTTTTCTCTGCTCCGTCCTGATGCAGGGGAGGCTCCCGTGTGCGATGTGTGCAAGCGGCGAGGGTTTTTGTTTTGTCAACAAGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATTCATTCCGCTAATGAACTCACTAAGAAGCACGATAGGTTTCTTCTAACTGGGATTAAGCTTTCCGCCAGCGCTGCTCTGTATGCGCCACCTCCATCCGGCGAGAAACAAATTGAGAGTGGTGGTCGTGTTGTTTCTGCATCTAAGTCAAAGGGGTCTGTCAAGAAAGTGGCTGCGGTTTCCAAGGTTCCAACGATATGCACTCCAAATGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCGGCAGTAGTGAACAAGGGGGGTGGAGGTCAGATTGCGACCGGCGGAGGTGGATCGGCGAGTAGCATATCGGAGTATTTGATGGAGACGCTTCCTGGGTGGCACTTCGAAGATTTTCTTGATTCTTCTGTCTCTCCCCCTTTTGTGGAGTTTGATGATGGGATAGGATTTCCATTTGTGGAAGGTGATTTGAATGGTTGTTTTTCATCATCGGAACGTTTAGAGCTTTGGGTCCCTCAGGGGCCACCAGCTGCGCTGTATAATTCAGGATTAATGATGAATAATGGATTGAAGGACACAAAGGAATTGGGGGTAAATTCATCAAAAGTCAATCGAGAGTGGACTGATGATGGTTTCACTGTGCCACAGATCACAAGTACAGCCCCATCTTCAGGCTTTAAGAGATCCAGACCTTTTTGGTAA MKIQCDVCEKGDAAVFCTADEAALCDLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDVCKRRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPPPSGEKQIESGGRVVSASKSKGSVKKVAAVSKVPTICTPNVCVNAPTNITPAAVVNKGGGGQIATGGGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERLELWVPQGPPAALYNSGLMMNNGLKDTKELGVNSSKVNREWTDDGFTVPQITSTAPSSGFKRSRPFW Homology
BLAST of Cmc03g0082801.1 vs. NCBI nr
Match: XP_008444771.1 (PREDICTED: B-box zinc finger protein 20-like [Cucumis melo] >KAA0065189.1 B-box zinc finger protein 20-like [Cucumis melo var. makuwa]) HSP 1 Score: 620.9 bits (1600), Expect = 5.7e-174 Identity = 304/305 (99.67%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. NCBI nr
Match: XP_004152665.1 (B-box zinc finger protein 20 [Cucumis sativus] >KGN62650.1 hypothetical protein Csa_022601 [Cucumis sativus]) HSP 1 Score: 588.2 bits (1515), Expect = 4.1e-164 Identity = 290/306 (94.77%), Postives = 293/306 (95.75%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. NCBI nr
Match: XP_038885493.1 (B-box zinc finger protein 20-like [Benincasa hispida]) HSP 1 Score: 572.4 bits (1474), Expect = 2.3e-159 Identity = 281/306 (91.83%), Postives = 288/306 (94.12%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. NCBI nr
Match: XP_022144185.1 (B-box zinc finger protein 21-like isoform X1 [Momordica charantia]) HSP 1 Score: 499.6 bits (1285), Expect = 1.9e-137 Identity = 255/315 (80.95%), Postives = 268/315 (85.08%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. NCBI nr
Match: XP_022144186.1 (B-box zinc finger protein 21-like isoform X2 [Momordica charantia]) HSP 1 Score: 499.2 bits (1284), Expect = 2.5e-137 Identity = 255/314 (81.21%), Postives = 268/314 (85.35%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.8e-61 Identity = 149/347 (42.94%), Postives = 200/347 (57.64%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.3e-47 Identity = 111/220 (50.45%), Postives = 133/220 (60.45%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 3.4e-28 Identity = 64/129 (49.61%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.4e-28 Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 3.8e-27 Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy TrEMBL
Match: A0A5A7VI96 (B-box zinc finger protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005260 PE=4 SV=1) HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174 Identity = 304/305 (99.67%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy TrEMBL
Match: A0A1S3BBW0 (B-box zinc finger protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488017 PE=4 SV=1) HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174 Identity = 304/305 (99.67%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy TrEMBL
Match: A0A0A0LL53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365080 PE=4 SV=1) HSP 1 Score: 588.2 bits (1515), Expect = 2.0e-164 Identity = 290/306 (94.77%), Postives = 293/306 (95.75%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy TrEMBL
Match: A0A6J1CQY0 (B-box zinc finger protein 21-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 9.3e-138 Identity = 255/315 (80.95%), Postives = 268/315 (85.08%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. ExPASy TrEMBL
Match: A0A6J1CSK3 (B-box zinc finger protein 21-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 1.2e-137 Identity = 255/314 (81.21%), Postives = 268/314 (85.35%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 ) HSP 1 Score: 237.7 bits (605), Expect = 1.3e-62 Identity = 149/347 (42.94%), Postives = 200/347 (57.64%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein ) HSP 1 Score: 190.3 bits (482), Expect = 2.3e-48 Identity = 111/220 (50.45%), Postives = 133/220 (60.45%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 ) HSP 1 Score: 127.1 bits (318), Expect = 2.4e-29 Identity = 64/129 (49.61%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein ) HSP 1 Score: 127.1 bits (318), Expect = 2.4e-29 Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 0
BLAST of Cmc03g0082801.1 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein ) HSP 1 Score: 127.1 bits (318), Expect = 2.4e-29 Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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