Cmc02g0046861.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGGGCGGTTTAATCTTTTTACAAAATAAAATAAAACCCTCTCTCCTCTTAATTTCTTCTCAATCTTTCATCGTCTCTCTCCCATCTCTTCTTCTTCGCGCATCAAACCCTAGCCTCCTCCGCTCTTCATCTCCTCTAATTTCTCTTCTATCTCTTTTTCTTTTTCTCGTACAAAGAAGTAAGGTAAGAGGAAATCAACTTTTTTTTTTGTAACTTTTTAATACTTTATTTGTTCTATTTTTTTTCCTTTGTTCCATTCCTTTTTGTTGAATCTTTGTTGTTCTTTTTTTTGTTCAATCCTTTGTTCCATTTTTTTTTTGTTGAATCTTTGTTGTTCTATTTTTTTTTTTTTTTGTTGAATCCTTTGTTCCATTTTTTTGTTGAATCTTTGTTGTTCTATTTTTTTTTGTTGAATCCTTTGTTCCATTTTTTTTGTTGAATCTTTGCTGTTCTTTTTTTTTGTTCAATCCTTTGTTCCTTTTTTTTTTGTTGAATCTTTGTTGTTTTTTTTTTGTTCAATCATTTGTTCCAATTTTTTTGTTGAAGATTTGTTGTTCCATTTTTTTTTGTTGAATCATTTGTTCCATTTTTTTGTTGAATCTTTCCTATTCCATTTTTTTTTTGTTGAATTCTTTGTTCCATTTTTTTTGTTGAATTCTTTGTTCCATTTTTTTGTTTAATCTTTGCTGTTCTTTTTCTTTGTTTAATCCTTTGTTTCATTTTTTTGTTGAATCTTTTCTGTTCTTTTTGTTTTTTTTGTTGAATCCTTTGTTCTATTTTTTTTTTTTTTGTTGAATCTTTGTTGTTCTCTTTTTCTTTTTTGTTCAATCCTTTGTTCCTTTTTTTTTTGTTGAATCTCTGCTAAAGTTCTTTTTTTGTGTGTTTTTTCATTCATCTTTATCTTTGTTATAAGGTCTTTATCTTTGTTATAAGGTTTTATTGGCGGATCTGTTCGTTTTTTGTGTAATTTTTTAATCCTTTGTTTGTTCTAATTATTTTTTGTTCTTTCCATTTGGGTTGTTTGTTCAATCTTATGTGTTCTACTAAGGTTCTTTTTTGTGTTCTACATGCATTTGTTTTTTTTTTTTTTTTTTGTAAGGTCTTTATCTTTGTTGTAAGGTTTTTTTTTCATGTGTTTTCATGCATTTCTAAGTTCTCTTTTTTATCTGTCTTTTTTTCCTTTTTCTTGTTTTGTAAATACAATTTTGTTTTTTTTTTTAATTTTACTGAATAGAGAAAATTAGAATTGGAGATACTATTCTGTTTAATTCATTTTTTTTCTATTACCAGATCTGAAAAAGTTTTTGATGGAAATGATATTGCAAATCATGCAGTGGCTTATCCTTTTTTGCCTTATTTTGTAGAAATATCATGTCAAGAACAAGGATATATAGAAGTTCCTTGATGGTATCTACTTCAAGAAAGAGAAGTTGGAGCTTGGAGGTGATCAATACAAGTGTAAGTTATATCTGCACTTAGTTTCTCTTTTGGAATTTTTTTTTCACGACTAACTTAATTTTGTGATGTTTTTCTTTTTTTGTGTCTACTCTTTGAAAATACATCACAATTTTAGTTAAGGCACAAAAACAATGCTCCTCAATTACCCATTTTTTACTTACGAATCTAATAATAATGATCTTAGGTTCTTCATGTGTGCATTGCATTAACATTATATTTCATGTGTGCATTGCATTAACATTATATTGATCCTGAATTTTTAGTTATGTGAAGCTTAGATGCTCATTAACCATTTATTTTAAAACATCAAACTTTAATTTTTTTTATTTATTTGCAATTGTGGAACATTTTGGTTATTTGTTTGTTTTAAAACATTAAGTTTTGATATTTTGATTACTTTTCTAAATCAAAGTTTGTAAATAAGTTTGTGTAGTCTTAGTGTTTGAGTTTTAAAATATTTTGGTACCTTGATTTGTTTATTTGGTAGTTGAGAAATTTAAATTTGACAAAACTAATTTGATAGTGGATAATAGTTGAGAGAGATTTAAATTTATAAATCTTATTTTATTTATATATGGGGTAGTTGTATTTGTATTAAAAAAAATTAATGTTTACTTTTGGTAGTTGAGGCATTTAATTTTTGGAAATCTTAATTTTATTTTATTTGTATATAATACATAGTAATTATTATTTTTTTCATTTATCAATGGTGGTTGAGTGATTTGAAAGGAAAAATTTATTAGTTCACACACCCATTTGTTTTAAATAGAGTACTTCTCCTTCATTTCTAAACCACAACCTCCTTGGTTTGTTTCTAAAATTTACTTTCTTTGAGGTTGAGGTCATAACATGCTCCCATATCTTTGAGTGGTAACTATTTTACATTTATTTTATATAGACTTTGTTTTATATATATTATTATCTTTTTTTTCTTATACTATTATTTTCCTTCTTTTTCCATTGTTCTTTGATATTTTGTTTGGGTATGTATATTTTACTTTGTTAATGTGGATTTTTCTTTGTTTTCCAACTATCAAGAAGTAAGCTCAATTATATTAGTTCCACTTAGCCTTACCTTGCATAGTCACACCATTACGTAATATGCTCTTTTCTTTCCTACATTTATATGGACTTTTGTGTTTTTTAATTTCTTTGTTAGTACATTCATGTTTTGTATATTATGATTGTGTTATATTTGTCAAATTATTTAGTTTAACTTTTGAGAATACTGTGAAATTTAATTTGTAATATTATTTTTTTCCTTTTTAATTTAATTTATATTGTTCACTTGCTTTGATAAAACATGAGCGTTACACATGTTTTTTTATAAACAAAAAAGTCACTTGAAACCTCTGTTTGTAAATAACAATAATTCTGATTGTTTTATAAAAATAAATGGGATGAGTATTACTAAACTTTTTCTTAATCTAAACAAATGGTTGATGCGATATTGGATTGTTATATAAAGATTTGTACAAAATTGAATTTTAAGAATGATTGGCTTTAACCTATTTTAAAAAACAAAATTAAATTATAAAATTTAAATTTCATATAAAATTAAATATTTAATTTTAGAAAACTGATATGTCATAAAAAAGATTAAAGAAGAAAGCAAATTTCTTACTATGATTTTTGTTATTTTGGATTTTAAAACGAAAGATAAATTAATAACTTATTATTAACTTCTAAAACATTGGTAAATTTGTAACAAACCAATATGTTAAAACTTTTTTTTGTAAATTATTAAAAAAGATAATCTACAAAGCAAGTTTTTTTTTCTTTTTTAAAGATATCATTGTCTTTTCTAAAATCAAAACTAAATAAAAAAAAAAAAAAAAACTTGTTTTACTTCATAACTAAATTGAGTTAAATAAATTGAGAAAACGAAAACAATTTCTTAAAACTTTTGTTTTTAAGAAAATAATCGTAAAAGAAGATAATCTAGTATTTTTTAAAGCAATTTTAAATTAAAATTAAGTCTCACAATTTTTTTTTAAAAGACATCATTGTCTTTTTAAAATCAAAACTAAATCAAGAAAATTTTTAAACTTCATAGCTAAATTATATAGATAATGAGTTATATAATTAAAAAGCAAAAATAATTTTTAAAAATTTTTGTTTTTAAGAAAAAATTTTGTAAAGATAATGTGGTACTTCTAAAAAGCAATGCTAAATTAAAATCAATTAAGACACCATTGTCTTTTCTAAAATTAAAACTAAATCAAGAAAATTTTCAAACTTCATAACGAAATTACATAGAACAAAAAGTTACATAATTAAAAAAAACAAAAACAATTTTTTAAAACTTTTGTTTTGAAGAAAAAAATTGTAAAAGAAGATAATCTTGTATTATTTTTAAAAAGCAATGCTAAATTAAAATCAAGTAAGTCTCACAATTTTTTTTACATAATTAATAAAAAAACAAAAAACCTCGTGTACCAGGAACTCAATTGTGTTTGTTTTGTCAGGAACTTATCGTTAATTAAAGTACTAAAATAGCATGGACATAGAACCAAACGAGTTGATTGCAATACTTACTATCATTTGCATAACACAACAACAATGGATGCTAATGTTCAATATGATAATGAGACTTGGAGATAGAAGAATAGAAAACCAATCACCACACCTAAGACACCAGATTAGGCAACTTAACTTTTTTCGTCTAATTCATGAAAGTGATATAGCTCGTCGAGAGAGTACACGGATGGATCGAAGATGTTTTACTATCTTGTGTACTATGTTAAGAATAAGAGGGGGATTAGAAGCCACTCAATATGTGGATGTTGAAGAGATGGTTGCGATTTTTTTGCATATTGTAGCACGTGATGTTAAGAATAAGGTAGCTCGATGACATTTTGCAAGGTCTAGTGAAACATTGTCAAGACACTTCAATGTTCTTCTTAACCCAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCCATTCATGTTCGCACGAGAAGTGGCGATCATGGTTTCAGGTATATAATCGGTCCCCCACTACTTTATAGTGGATATGTGCTTCTATGAATTGACGAATAAATATCTTTTGCCAGTTGACAGAATTGTCTAGGTGCATTAGATGGTATACACACCAAAGTGAATGTAAGTATGAGTGATCGCCCAAGGTATAGGTCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTCGCAAAATGGTGAGTTCATATTTGTCATGCTTGGATGGAAAGGGTCTGGATCCGATTCGAGAGTACTTAGAGATGCAGTGTCACGACCTACTGGTTTAAAAGTCCTAAAGGGTAAGATGATGCATTCTCTTCTCCCCACACAGTGGTGTTAAATCATATGCTCATTTAATATGGTGTACCCTAATAATTCATTATGGGTGCAACATGGGCAGGTTACTACTACTTCTGTGATGTTGGTTATCCAAATGTTAAAGGACTCCTCACTCCATACTGAGGTCAACGTTACCATCTAACTGAATGGCATGGAGGAAACCCACCAAAATGCCCGAAAGAGTTATTTAACATGAGGCATTCCTCTGCTAGAAATGTTATTGAAAGAGCATTTAGATCATTGAAGGGTCGGTGGGCCATTCTATGAGGGAGATCCTATTACCTCGTTGACATACAATGTAAAATAATAACAACATGTTGCCTCTTACATAACTTGATACATGGAGAAATGGGTTCAGAAGCAACATTTGAGGAGCCACATCTTGGTGAAGGTGATTCAAGCGAGATGAACATTGAGAATATAAACTTCGTGGAAACGACTAATGTCTAGACTGAATGGAGGGATAATCTTGCAAACGAAATGTTTGAGGATTGGAATAATGTATGACTAATATATGTAGTTTAGTTTTCTATATAATTTTGTTGTTTTATCACATGATCTGTACTTGAACTATTTTTTTTTTTTTTTTGTAATTGGAGTCAGAAATACATAGAGTTTCCTCTAAATTATGAGAACTAAGTTGTTTATATGTCAATCTATAAATTTTGTATCTATTGACTTTTATAATATTCATGTGCTAATTTTAGATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTACAAGTACAAAACTAATGACAGAAAAAATTCCTGAAAGCAACATACAAGTGACTCTAAATCTAGAATCGAGAGTAAAAATTTTAAAGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGATGATTAGGTTAAGGTAAGAAGATGAATATAATTCATACTTTCTATAAAAGTAAAATATAATATACTTACATATGTTAACTCCATGTAGGGACACCCCAATGCTCAAGCCCTACTAAATAAACCATTTCCTTACTTCCATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTATTGAAATGCACTCACAAACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTAAGGGGAGGACATGTCATCCACTCCAACAAGTATGGCACATGATGCGGGATCATCTAGGTCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGATCATCCCTACACAAACGATTATATGCTAAATTACAGATTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTATCTGATCCCACGATGTTGCACGCATTCCTTGACTACCCAGCAGAATGGAAGTATAGAAAATGCATGTGTATCTTAGAAAGACAACCATAACCATAACTAAAGTAACTTTACTTAACTTTCACTTTTGTTTGAGCCTTTGGTCGCTTACTTTTGAAACAAACTAGACCCCTTGCTTAACTATAACTTTTGTAAACCCCATCAAATTAAATGACTTGGTATATTTTGTAGATGGATTGTAATATTCCTAATTAG AAATGGGCGGTTTAATCTTTTTACAAAATAAAATAAAACCCTCTCTCCTCTTAATTTCTTCTCAATCTTTCATCGTCTCTCTCCCATCTCTTCTTCTTCGCGCATCAAACCCTAGCCTCCTCCGCTCTTCATCTCCTCTAATTTCTCTTCTATCTCTTTTTCTTTTTCTCGTACAAAGAAGTAAGAAATATCATGTCAAGAACAAGGATATATAGAAGTTCCTTGATGGTATCTACTTCAAGAAAGAGAAGTTGGAGCTTGGAGGTGATCAATACAAGTATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTACAAGTACAAAACTAATGACAGAAAAAATTCCTGAAAGCAACATACAAGTGACTCTAAATCTAGAATCGAGAGTAAAAATTTTAAAGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGATGATTAGGTTAAGGGACACCCCAATGCTCAAGCCCTACTAAATAAACCATTTCCTTACTTCCATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTATTGAAATGCACTCACAAACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTAAGGGGAGGACATGTCATCCACTCCAACAAGTATGGCACATGATGCGGGATCATCTAGGTCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGATCATCCCTACACAAACGATTATATGCTAAATTACAGATTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTATCTGATCCCACGATGTTGCACGCATTCCTTGACTACCCAGCAGAATGGAAGTATAGAAAATGCATGTGTATCTTAGAAAGACAACCATAACCATAACTAAAGTAACTTTACTTAACTTTCACTTTTGTTTGAGCCTTTGGTCGCTTACTTTTGAAACAAACTAGACCCCTTGCTTAACTATAACTTTTGTAAACCCCATCAAATTAAATGACTTGGTATATTTTGTAGATGGATTGTAATATTCCTAATTAG ATGTCAAGAACAAGGATATATAGAAGTTCCTTGATGGTATCTACTTCAAGAAAGAGAAGTTGGAGCTTGGAGGTGATCAATACAAGTATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTACAAGTACAAAACTAA MSRTRIYRSSLMVSTSRKRSWSLEVINTSMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQVQN Homology
BLAST of Cmc02g0046861.1 vs. NCBI nr
Match: KAA0035161.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 2.3e-18 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. NCBI nr
Match: TYK29231.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100.5 bits (249), Expect = 6.8e-18 Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. NCBI nr
Match: KAA0049607.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. NCBI nr
Match: TYK15965.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 3.4e-17 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. ExPASy TrEMBL
Match: A0A5A7T0P1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002610 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. ExPASy TrEMBL
Match: A0A5D3E0K8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00200 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.3e-18 Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. ExPASy TrEMBL
Match: A0A5D3CWW4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00850 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 9.6e-18 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. ExPASy TrEMBL
Match: A0A5A7U5I3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00600 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 9.6e-18 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0
BLAST of Cmc02g0046861.1 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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