Cmc02g0046861 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0046861
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
LocationCMiso1.1chr02: 12440950 .. 12447612 (+)
RNA-Seq ExpressionCmc02g0046861
SyntenyCmc02g0046861
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGGCGGTTTAATCTTTTTACAAAATAAAATAAAACCCTCTCTCCTCTTAATTTCTTCTCAATCTTTCATCGTCTCTCTCCCATCTCTTCTTCTTCGCGCATCAAACCCTAGCCTCCTCCGCTCTTCATCTCCTCTAATTTCTCTTCTATCTCTTTTTCTTTTTCTCGTACAAAGAAGTAAGGTAAGAGGAAATCAACTTTTTTTTTTGTAACTTTTTAATACTTTATTTGTTCTATTTTTTTTCCTTTGTTCCATTCCTTTTTGTTGAATCTTTGTTGTTCTTTTTTTTGTTCAATCCTTTGTTCCATTTTTTTTTTGTTGAATCTTTGTTGTTCTATTTTTTTTTTTTTTTGTTGAATCCTTTGTTCCATTTTTTTGTTGAATCTTTGTTGTTCTATTTTTTTTTGTTGAATCCTTTGTTCCATTTTTTTTGTTGAATCTTTGCTGTTCTTTTTTTTTGTTCAATCCTTTGTTCCTTTTTTTTTTGTTGAATCTTTGTTGTTTTTTTTTTGTTCAATCATTTGTTCCAATTTTTTTGTTGAAGATTTGTTGTTCCATTTTTTTTTGTTGAATCATTTGTTCCATTTTTTTGTTGAATCTTTCCTATTCCATTTTTTTTTTGTTGAATTCTTTGTTCCATTTTTTTTGTTGAATTCTTTGTTCCATTTTTTTGTTTAATCTTTGCTGTTCTTTTTCTTTGTTTAATCCTTTGTTTCATTTTTTTGTTGAATCTTTTCTGTTCTTTTTGTTTTTTTTGTTGAATCCTTTGTTCTATTTTTTTTTTTTTTGTTGAATCTTTGTTGTTCTCTTTTTCTTTTTTGTTCAATCCTTTGTTCCTTTTTTTTTTGTTGAATCTCTGCTAAAGTTCTTTTTTTGTGTGTTTTTTCATTCATCTTTATCTTTGTTATAAGGTCTTTATCTTTGTTATAAGGTTTTATTGGCGGATCTGTTCGTTTTTTGTGTAATTTTTTAATCCTTTGTTTGTTCTAATTATTTTTTGTTCTTTCCATTTGGGTTGTTTGTTCAATCTTATGTGTTCTACTAAGGTTCTTTTTTGTGTTCTACATGCATTTGTTTTTTTTTTTTTTTTTTGTAAGGTCTTTATCTTTGTTGTAAGGTTTTTTTTTCATGTGTTTTCATGCATTTCTAAGTTCTCTTTTTTATCTGTCTTTTTTTCCTTTTTCTTGTTTTGTAAATACAATTTTGTTTTTTTTTTTAATTTTACTGAATAGAGAAAATTAGAATTGGAGATACTATTCTGTTTAATTCATTTTTTTTCTATTACCAGATCTGAAAAAGTTTTTGATGGAAATGATATTGCAAATCATGCAGTGGCTTATCCTTTTTTGCCTTATTTTGTAGAAATATCATGTCAAGAACAAGGATATATAGAAGTTCCTTGATGGTATCTACTTCAAGAAAGAGAAGTTGGAGCTTGGAGGTGATCAATACAAGTGTAAGTTATATCTGCACTTAGTTTCTCTTTTGGAATTTTTTTTTCACGACTAACTTAATTTTGTGATGTTTTTCTTTTTTTGTGTCTACTCTTTGAAAATACATCACAATTTTAGTTAAGGCACAAAAACAATGCTCCTCAATTACCCATTTTTTACTTACGAATCTAATAATAATGATCTTAGGTTCTTCATGTGTGCATTGCATTAACATTATATTTCATGTGTGCATTGCATTAACATTATATTGATCCTGAATTTTTAGTTATGTGAAGCTTAGATGCTCATTAACCATTTATTTTAAAACATCAAACTTTAATTTTTTTTATTTATTTGCAATTGTGGAACATTTTGGTTATTTGTTTGTTTTAAAACATTAAGTTTTGATATTTTGATTACTTTTCTAAATCAAAGTTTGTAAATAAGTTTGTGTAGTCTTAGTGTTTGAGTTTTAAAATATTTTGGTACCTTGATTTGTTTATTTGGTAGTTGAGAAATTTAAATTTGACAAAACTAATTTGATAGTGGATAATAGTTGAGAGAGATTTAAATTTATAAATCTTATTTTATTTATATATGGGGTAGTTGTATTTGTATTAAAAAAAATTAATGTTTACTTTTGGTAGTTGAGGCATTTAATTTTTGGAAATCTTAATTTTATTTTATTTGTATATAATACATAGTAATTATTATTTTTTTCATTTATCAATGGTGGTTGAGTGATTTGAAAGGAAAAATTTATTAGTTCACACACCCATTTGTTTTAAATAGAGTACTTCTCCTTCATTTCTAAACCACAACCTCCTTGGTTTGTTTCTAAAATTTACTTTCTTTGAGGTTGAGGTCATAACATGCTCCCATATCTTTGAGTGGTAACTATTTTACATTTATTTTATATAGACTTTGTTTTATATATATTATTATCTTTTTTTTCTTATACTATTATTTTCCTTCTTTTTCCATTGTTCTTTGATATTTTGTTTGGGTATGTATATTTTACTTTGTTAATGTGGATTTTTCTTTGTTTTCCAACTATCAAGAAGTAAGCTCAATTATATTAGTTCCACTTAGCCTTACCTTGCATAGTCACACCATTACGTAATATGCTCTTTTCTTTCCTACATTTATATGGACTTTTGTGTTTTTTAATTTCTTTGTTAGTACATTCATGTTTTGTATATTATGATTGTGTTATATTTGTCAAATTATTTAGTTTAACTTTTGAGAATACTGTGAAATTTAATTTGTAATATTATTTTTTTCCTTTTTAATTTAATTTATATTGTTCACTTGCTTTGATAAAACATGAGCGTTACACATGTTTTTTTATAAACAAAAAAGTCACTTGAAACCTCTGTTTGTAAATAACAATAATTCTGATTGTTTTATAAAAATAAATGGGATGAGTATTACTAAACTTTTTCTTAATCTAAACAAATGGTTGATGCGATATTGGATTGTTATATAAAGATTTGTACAAAATTGAATTTTAAGAATGATTGGCTTTAACCTATTTTAAAAAACAAAATTAAATTATAAAATTTAAATTTCATATAAAATTAAATATTTAATTTTAGAAAACTGATATGTCATAAAAAAGATTAAAGAAGAAAGCAAATTTCTTACTATGATTTTTGTTATTTTGGATTTTAAAACGAAAGATAAATTAATAACTTATTATTAACTTCTAAAACATTGGTAAATTTGTAACAAACCAATATGTTAAAACTTTTTTTTGTAAATTATTAAAAAAGATAATCTACAAAGCAAGTTTTTTTTTCTTTTTTAAAGATATCATTGTCTTTTCTAAAATCAAAACTAAATAAAAAAAAAAAAAAAAACTTGTTTTACTTCATAACTAAATTGAGTTAAATAAATTGAGAAAACGAAAACAATTTCTTAAAACTTTTGTTTTTAAGAAAATAATCGTAAAAGAAGATAATCTAGTATTTTTTAAAGCAATTTTAAATTAAAATTAAGTCTCACAATTTTTTTTTAAAAGACATCATTGTCTTTTTAAAATCAAAACTAAATCAAGAAAATTTTTAAACTTCATAGCTAAATTATATAGATAATGAGTTATATAATTAAAAAGCAAAAATAATTTTTAAAAATTTTTGTTTTTAAGAAAAAATTTTGTAAAGATAATGTGGTACTTCTAAAAAGCAATGCTAAATTAAAATCAATTAAGACACCATTGTCTTTTCTAAAATTAAAACTAAATCAAGAAAATTTTCAAACTTCATAACGAAATTACATAGAACAAAAAGTTACATAATTAAAAAAAACAAAAACAATTTTTTAAAACTTTTGTTTTGAAGAAAAAAATTGTAAAAGAAGATAATCTTGTATTATTTTTAAAAAGCAATGCTAAATTAAAATCAAGTAAGTCTCACAATTTTTTTTACATAATTAATAAAAAAACAAAAAACCTCGTGTACCAGGAACTCAATTGTGTTTGTTTTGTCAGGAACTTATCGTTAATTAAAGTACTAAAATAGCATGGACATAGAACCAAACGAGTTGATTGCAATACTTACTATCATTTGCATAACACAACAACAATGGATGCTAATGTTCAATATGATAATGAGACTTGGAGATAGAAGAATAGAAAACCAATCACCACACCTAAGACACCAGATTAGGCAACTTAACTTTTTTCGTCTAATTCATGAAAGTGATATAGCTCGTCGAGAGAGTACACGGATGGATCGAAGATGTTTTACTATCTTGTGTACTATGTTAAGAATAAGAGGGGGATTAGAAGCCACTCAATATGTGGATGTTGAAGAGATGGTTGCGATTTTTTTGCATATTGTAGCACGTGATGTTAAGAATAAGGTAGCTCGATGACATTTTGCAAGGTCTAGTGAAACATTGTCAAGACACTTCAATGTTCTTCTTAACCCAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCCATTCATGTTCGCACGAGAAGTGGCGATCATGGTTTCAGGTATATAATCGGTCCCCCACTACTTTATAGTGGATATGTGCTTCTATGAATTGACGAATAAATATCTTTTGCCAGTTGACAGAATTGTCTAGGTGCATTAGATGGTATACACACCAAAGTGAATGTAAGTATGAGTGATCGCCCAAGGTATAGGTCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTCGCAAAATGGTGAGTTCATATTTGTCATGCTTGGATGGAAAGGGTCTGGATCCGATTCGAGAGTACTTAGAGATGCAGTGTCACGACCTACTGGTTTAAAAGTCCTAAAGGGTAAGATGATGCATTCTCTTCTCCCCACACAGTGGTGTTAAATCATATGCTCATTTAATATGGTGTACCCTAATAATTCATTATGGGTGCAACATGGGCAGGTTACTACTACTTCTGTGATGTTGGTTATCCAAATGTTAAAGGACTCCTCACTCCATACTGAGGTCAACGTTACCATCTAACTGAATGGCATGGAGGAAACCCACCAAAATGCCCGAAAGAGTTATTTAACATGAGGCATTCCTCTGCTAGAAATGTTATTGAAAGAGCATTTAGATCATTGAAGGGTCGGTGGGCCATTCTATGAGGGAGATCCTATTACCTCGTTGACATACAATGTAAAATAATAACAACATGTTGCCTCTTACATAACTTGATACATGGAGAAATGGGTTCAGAAGCAACATTTGAGGAGCCACATCTTGGTGAAGGTGATTCAAGCGAGATGAACATTGAGAATATAAACTTCGTGGAAACGACTAATGTCTAGACTGAATGGAGGGATAATCTTGCAAACGAAATGTTTGAGGATTGGAATAATGTATGACTAATATATGTAGTTTAGTTTTCTATATAATTTTGTTGTTTTATCACATGATCTGTACTTGAACTATTTTTTTTTTTTTTTTGTAATTGGAGTCAGAAATACATAGAGTTTCCTCTAAATTATGAGAACTAAGTTGTTTATATGTCAATCTATAAATTTTGTATCTATTGACTTTTATAATATTCATGTGCTAATTTTAGATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTACAAGTACAAAACTAATGACAGAAAAAATTCCTGAAAGCAACATACAAGTGACTCTAAATCTAGAATCGAGAGTAAAAATTTTAAAGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGATGATTAGGTTAAGGTAAGAAGATGAATATAATTCATACTTTCTATAAAAGTAAAATATAATATACTTACATATGTTAACTCCATGTAGGGACACCCCAATGCTCAAGCCCTACTAAATAAACCATTTCCTTACTTCCATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTATTGAAATGCACTCACAAACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTAAGGGGAGGACATGTCATCCACTCCAACAAGTATGGCACATGATGCGGGATCATCTAGGTCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGATCATCCCTACACAAACGATTATATGCTAAATTACAGATTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTATCTGATCCCACGATGTTGCACGCATTCCTTGACTACCCAGCAGAATGGAAGTATAGAAAATGCATGTGTATCTTAGAAAGACAACCATAACCATAACTAAAGTAACTTTACTTAACTTTCACTTTTGTTTGAGCCTTTGGTCGCTTACTTTTGAAACAAACTAGACCCCTTGCTTAACTATAACTTTTGTAAACCCCATCAAATTAAATGACTTGGTATATTTTGTAGATGGATTGTAATATTCCTAATTAG

mRNA sequence

AAATGGGCGGTTTAATCTTTTTACAAAATAAAATAAAACCCTCTCTCCTCTTAATTTCTTCTCAATCTTTCATCGTCTCTCTCCCATCTCTTCTTCTTCGCGCATCAAACCCTAGCCTCCTCCGCTCTTCATCTCCTCTAATTTCTCTTCTATCTCTTTTTCTTTTTCTCGTACAAAGAAGTAAGAAATATCATGTCAAGAACAAGGATATATAGAAGTTCCTTGATGGTATCTACTTCAAGAAAGAGAAGTTGGAGCTTGGAGGTGATCAATACAAGTATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTACAAGTACAAAACTAATGACAGAAAAAATTCCTGAAAGCAACATACAAGTGACTCTAAATCTAGAATCGAGAGTAAAAATTTTAAAGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGATGATTAGGTTAAGGGACACCCCAATGCTCAAGCCCTACTAAATAAACCATTTCCTTACTTCCATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTATTGAAATGCACTCACAAACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTAAGGGGAGGACATGTCATCCACTCCAACAAGTATGGCACATGATGCGGGATCATCTAGGTCAAGTAAGAAAAGACGGTCATATTCAGGGGACCTCATGGACACATTTCGTGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTGCATGGCAGAGAGAAAAAATGGAAATAGATCATCCCTACACAAACGATTATATGCTAAATTACAGATTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTATCTGATCCCACGATGTTGCACGCATTCCTTGACTACCCAGCAGAATGGAAGTATAGAAAATGCATGTGTATCTTAGAAAGACAACCATAACCATAACTAAAGTAACTTTACTTAACTTTCACTTTTGTTTGAGCCTTTGGTCGCTTACTTTTGAAACAAACTAGACCCCTTGCTTAACTATAACTTTTGTAAACCCCATCAAATTAAATGACTTGGTATATTTTGTAGATGGATTGTAATATTCCTAATTAG

Coding sequence (CDS)

ATGTCAAGAACAAGGATATATAGAAGTTCCTTGATGGTATCTACTTCAAGAAAGAGAAGTTGGAGCTTGGAGGTGATCAATACAAGTATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGATAATGGAACATTCAAACTGGGATATTTGGTACAAGTACAAAACTAA

Protein sequence

MSRTRIYRSSLMVSTSRKRSWSLEVINTSMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQVQN
Homology
[Close]
BLAST of Cmc02g0046861 vs. NCBI nr
Match: KAA0035161.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 2.3e-18
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 29 SMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ 78
          +MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL Q
Sbjct: 51 NMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLKQ 99

[Close]
BLAST of Cmc02g0046861 vs. NCBI nr
Match: TYK29231.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 6.8e-18
Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 0 

Query: 26 INTSMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL 76
          I   MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL
Sbjct: 14 ILVKMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL 63

[Close]
BLAST of Cmc02g0046861 vs. NCBI nr
Match: KAA0049607.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 29  SMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQVQ 80
           +MASTNSKATKHRWTTIEDEALVECLLQLVEE GWRAD+GTFK GYLVQVQ
Sbjct: 222 NMASTNSKATKHRWTTIEDEALVECLLQLVEEGGWRADDGTFKPGYLVQVQ 272

[Close]
BLAST of Cmc02g0046861 vs. NCBI nr
Match: TYK15965.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 29  SMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQVQ 80
           +MASTNSKATKHRWTTIEDEALVECLLQLVEE GWRAD+GTFK GYLVQVQ
Sbjct: 149 NMASTNSKATKHRWTTIEDEALVECLLQLVEEGGWRADDGTFKPGYLVQVQ 199

[Close]
BLAST of Cmc02g0046861 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 3.4e-17
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0 

Query: 26  INTSMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ 78
           ++T MASTNSKATKHRWTTIEDE LVECLLQLVEE GWRADNGTFKLGYL Q
Sbjct: 134 LHTEMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQ 185

[Close]
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match: A0A5A7T0P1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002610 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 29 SMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ 78
          +MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL Q
Sbjct: 51 NMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLKQ 99

[Close]
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match: A0A5D3E0K8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00200 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-18
Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 0 

Query: 26 INTSMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL 76
          I   MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL
Sbjct: 14 ILVKMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL 63

[Close]
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match: A0A5D3CWW4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00850 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.6e-18
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 29  SMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQVQ 80
           +MASTNSKATKHRWTTIEDEALVECLLQLVEE GWRAD+GTFK GYLVQVQ
Sbjct: 149 NMASTNSKATKHRWTTIEDEALVECLLQLVEEGGWRADDGTFKPGYLVQVQ 199

[Close]
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match: A0A5A7U5I3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00600 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.6e-18
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 29  SMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQVQ 80
           +MASTNSKATKHRWTTIEDEALVECLLQLVEE GWRAD+GTFK GYLVQVQ
Sbjct: 222 NMASTNSKATKHRWTTIEDEALVECLLQLVEEGGWRADDGTFKPGYLVQVQ 272

[Close]
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0 

Query: 26  INTSMASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ 78
           ++T MASTNSKATKHRWTTIEDE LVECLLQLVEE GWRADNGTFKLGYL Q
Sbjct: 134 LHTEMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQ 185

The following BLAST results are available for this feature:
BLAST of Cmc02g0046861 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035161.12.3e-1895.92retrotransposon protein [Cucumis melo var. makuwa][more]
TYK29231.16.8e-1894.00retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0049607.12.0e-1792.16retrotransposon protein [Cucumis melo var. makuwa][more]
TYK15965.12.0e-1792.16retrotransposon protein [Cucumis melo var. makuwa][more]
TYK07921.13.4e-1788.46hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa][more]
BLAST of Cmc02g0046861 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T0P11.1e-1895.92Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E0K83.3e-1894.00Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CWW49.6e-1892.16Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U5I39.6e-1892.16Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C7T41.6e-1788.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc02g0046861 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 29..79
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 29..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0046861.1Cmc02g0046861.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding