CmaCh18G003350.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGAATTTTTTGTGACAACAAAGTTCAGGCTAACACCATAAGAGTCGTTGGAACTTAGTAAGTACACTTCTCATCATTTTATAGTAATTTGATTACGTACTTTTATGCAGCTAAAAGAAAGTCATTCATGTGTGTTTATTTAATATAGTGGATATATGTCTCCGGAGTATGCAATGCAAGGTCATTTTTCAGAGAAAACAGATGTATTTAGCTTTGGAGTGTTATTGCTCGAAATTATGAGTGGAAGAAAAAATACCGATTTCTACAACCATGAATATGCCATAAGCTTATTGGGATTCGTACGTCTACAAAACTCCACGTACAAGTTGATAATACCATTCAAATCTCAATGTCTCATACAAATTTCTTCTTAACTTGATTTCAGGCATGGAAGCTGTGGTTGGAAAGCAACCTTGTTCCTGTGATTGAACCGACAATATATGATTGTGCTACCATCAAGAAATTTTGAGATGCATTCATGTAGGGCTCTTATGCGTTCAAGAATTTATAAAAGATAGACCAAACGTCTCCACGGTTATTTCAATGCTCAATAGTGAAATGGTAAATCTTCCTTCTCTAAAGCAACCTGGCTTTGTTGGCAGACCAAATGAAGGCAACACGGACTCATCTCAACAAAATTTAGATACCTATTCGGTAAACAATGTGACACTTACCACAATTATAGCAAGATAGTGCATTGGGTAGAAAAACCAATTTGTTTTAATGGTCTTATATAGGAAGA ATGGCAAGAATTTTTTGTGACAACAAAGTTCAGGCTAACACCATAAGAGTCGTTGGAACTTATGGATATATGTCTCCGGAGTATGCAATGCAAGGTCATTTTTCAGAGAAAACAGATGTATTTAGCTTTGGAGTGTTATTGCTCGAAATTATGAGTGGAAGAAAAAATACCGATTTCTACAACCATGAATATGCCATAAGCTTATTGGGATTCGCATGGAAGCTGTGGTTGGAAAGCAACCTTGTTCCTGTGATTGAACCGACAATATATGATTGTGCTACCATCAAGAAATTTTGAGATGCATTCATGTAGGGCTCTTATGCGTTCAAGAATTTATAAAAGATAGACCAAACGTCTCCACGGTTATTTCAATGCTCAATAGTGAAATGGTAAATCTTCCTTCTCTAAAGCAACCTGGCTTTGTTGGCAGACCAAATGAAGGCAACACGGACTCATCTCAACAAAATTTAGATACCTATTCGGTAAACAATGTGACACTTACCACAATTATAGCAAGATAGTGCATTGGGTAGAAAAACCAATTTGTTTTAATGGTCTTATATAGGAAGA ATGGCAAGAATTTTTTGTGACAACAAAGTTCAGGCTAACACCATAAGAGTCGTTGGAACTTATGGATATATGTCTCCGGAGTATGCAATGCAAGGTCATTTTTCAGAGAAAACAGATGTATTTAGCTTTGGAGTGTTATTGCTCGAAATTATGAGTGGAAGAAAAAATACCGATTTCTACAACCATGAATATGCCATAAGCTTATTGGGATTCGCATGGAAGCTGTGGTTGGAAAGCAACCTTGTTCCTGTGATTGAACCGACAATATATGATTGTGCTACCATCAAGAAATTTTGA MARIFCDNKVQANTIRVVGTYGYMSPEYAMQGHFSEKTDVFSFGVLLLEIMSGRKNTDFYNHEYAISLLGFAWKLWLESNLVPVIEPTIYDCATIKKF Homology
BLAST of CmaCh18G003350.1 vs. ExPASy Swiss-Prot
Match: Q09092 (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. viridis OX=3713 GN=SRK6 PE=1 SV=2) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-26 Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy Swiss-Prot
Match: Q39086 (Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-26 Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy Swiss-Prot
Match: Q9S972 (Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2) HSP 1 Score: 116.7 bits (291), Expect = 1.5e-25 Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy Swiss-Prot
Match: Q9SXB8 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3) HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25 Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy Swiss-Prot
Match: Q9SY89 (Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana OX=3702 GN=At1g61610 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 7.3e-25 Identity = 54/91 (59.34%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy TrEMBL
Match: A0A6J1K5C6 (LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Cucurbita maxima OX=3661 GN=LOC111490206 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy TrEMBL
Match: A0A6J1GTH8 (Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111456829 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.2e-43 Identity = 82/91 (90.11%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy TrEMBL
Match: A0A6J1KFW0 (Receptor-like serine/threonine-protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111495413 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 5.1e-37 Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy TrEMBL
Match: A0A6J1EL79 (Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111434313 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 5.1e-37 Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. ExPASy TrEMBL
Match: A0A6J1EHD7 (Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111434313 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 5.1e-37 Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. NCBI nr
Match: XP_022994503.1 (LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 [Cucurbita maxima]) HSP 1 Score: 191.8 bits (486), Expect = 2.8e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. NCBI nr
Match: XP_022954619.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Cucurbita moschata]) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42 Identity = 82/91 (90.11%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. NCBI nr
Match: XP_023542581.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.0 bits (458), Expect = 4.9e-42 Identity = 82/91 (90.11%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. NCBI nr
Match: XP_038895671.1 (G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895672.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895673.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895674.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895675.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895677.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895678.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895679.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895680.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895681.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895682.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895683.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida] >XP_038895684.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X2 [Benincasa hispida]) HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37 Identity = 74/91 (81.32%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. NCBI nr
Match: XP_023001212.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Cucurbita maxima]) HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36 Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. TAIR 10
Match: AT1G65790.1 (receptor kinase 1 ) HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27 Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. TAIR 10
Match: AT1G65800.1 (receptor kinase 2 ) HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26 Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. TAIR 10
Match: AT1G11330.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26 Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. TAIR 10
Match: AT1G11330.2 (S-locus lectin protein kinase family protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26 Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of CmaCh18G003350.1 vs. TAIR 10
Match: AT1G61610.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 114.4 bits (285), Expect = 5.2e-26 Identity = 54/91 (59.34%), Postives = 69/91 (75.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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