CmaCh17G002500.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G002500.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cyclin T1
Location	Cma_Chr17: 1284176 .. 1285907 (-)
Sequence length	917
RNA-Seq Expression	CmaCh17G002500.1
Synteny	CmaCh17G002500.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGGTAAGAAAAAACAATTTACTTTTATTCATTTGAAGTGAATGCTTGAAAGTTACTTTGCTCCTACTCTTAGTTTTTATTGTTATATACAATTGTGTATTTGGAGCTGATGTATTTTTTTGTTTTGAAGTACTGTTAGACATTGCCATCCTATTTAGTAATGGACTCAGATGGTTTGTTTAACTGTTTGATGCGTTCTTCAACAAGTGATGGTGGTAGTGGCAGTTGTATGGAAGGCTGATATGTGGTTTTTTTAGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATGTGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGGTACCTTGAAGAACTTCTGAATATTTTCTCACGTCCTATTATGTGATTGCTTTAAAAATTAAGATAACACTAACCATTTCTTCATTTTATTTTCACTCCTAAAATCGTGTGTTCAAGTCCTAGCCACGTTTATAGAGCAAAAAGTAGGTCTTGTTTGAGATATCATCTTTTTAGTTCAATATGTTTTTATTATTGAAAGATGTTTTCTATAGTTATGATCAGAGTTCAAGATTATATTGTAGTTGGAAATGATAACTTACAAGTGGGATTTTAGTAGAGCAAATTTAATTTTGAGAATAAACATATGATCCATGGAAATAAGCTATTGAAAAGTAAGAGAAATTCTCTTAGAAAGATAAGTTACTACCCATATTTGTTGTAGAAAACAGAATATTAGTTTTGAAAACAATCTCTTGAGCCCAACCTCTGGGCATGGGCTTTGAAAGGATAGGGGTGTGTTTTTGCCAGGCTTGTTGTAAGAATTTTGTGGTTATAATTCTTGTTTTACTTACTCAGGGGCTTGTTTTAGAATCTCAATGTTTGTCTTTGAAAAGAAGCTCCCAAGTTATGACGTGGTTTGTTTTTCACTCATGCTAAAATGCAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAAAGTGAAAGCTCGATAATGATGAAGCTTTTAGTCTGGTGAAATGATGTGCAATGATGGGTAAACATAACATATTTATGATTTAACATGAATCCTGACAGTCTTAAATGGTTAAATCCTGACAGTTTCCTTAGGTTATGTAGTGACTGTTGGTAGTTTTAACATGAATGGTTCTCAATTCATTTCCATGTGCAAAACAGTGGTTTAGAAGTACCGTAGGAAGACCTGTACTCAATTGGCGAACGGATGGTTATGTTATACAAAATGGCTCGCTTCTGATCTGCTCTGCTCTCTCCTTTAAATGTCATTGCCTTTTGATTCCTTTTTTTATTTATAGTCGTTCCGTCGTACATCTATTCCATAATGTTAGAATAGTTGATCCGCAGATATTCTCTTTTTTGGGCTTTCCCTTTCAAGCTCCTTCTCATGGTTTTAAAATGTGTCTTCTAGGGAAAAGTTTTCACATCTAGAGAATGTTTTGTTTTCCTCTTCAACCGATGTAAGATCTCACAATCCACCTCTTTTGGTGCTCATAGTCCCCGTTGACATTGATACCATTTGTAACAGCTCAAACTTCACTAACTTCTTTGAGTTTTTCCTTCTAG

mRNA sequence

ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTAGACATTGCCATCCTATTTAGTAATGGACTCAGATGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATGTGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAAAGTGAAAGCTCGATAATGATGAAGCTTTTAGTCTGGTGAAATGATGTGCAATGATGGGTAAACATAACATATTTATGATTTAACATGAATCCTGACAGTCTTAAATGGTTAAATCCTGACAGTTTCCTTAGGTTATGTAGTGACTGTTGGTAGTTTTAACATGAATGGTTCTCAATTCATTTCCATGTGCAAAACAGTGGTTTAGAAGTACCGTAGGAAGACCTGTACTCAATTGGCGAACGGATGGTTATGTTATACAAAATGGCTCGCTTCTGATCTGCTCTGCTCTCTCCTTTAAATGTCATTGCCTTTTGATTCCTTTTTTTATTTATAGTCGTTCCGTCGTACATCTATTCCATAATGTTAGAATAGTTGATCCGCAGATATTCTCTTTTTTGGGCTTTCCCTTTCAAGCTCCTTCTCATGGTTTTAAAATGTGTCTTCTAGGGAAAAGTTTTCACATCTAGAGAATGTTTTGTTTTCCTCTTCAACCGATGTAAGATCTCACAATCCACCTCTTTTGGTGCTCATAGTCCCCGTTGACATTGATACCATTTGTAACAGCTCAAACTTCACTAACTTCTTTGAGTTTTTCCTTCTAG

Coding sequence (CDS)

ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTAGACATTGCCATCCTATTTAGTAATGGACTCAGATGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATGTGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAA

Protein sequence

MGFNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF

Homology

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy Swiss-Prot
Match: Q56YF8 (Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-07
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF 105
           LR++L LQ++PH IAAGA  L+A+L  VD   Y+ +L QEF  TP  L+D+  Q++EL+
Sbjct: 205 LRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDITPCQLEDIRGQILELY 263

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy Swiss-Prot
Match: Q9FKE6 (Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 208 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy Swiss-Prot
Match: Q2RAC5 (Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L++V+ Q++EL+
Sbjct: 212 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY 271

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy Swiss-Prot
Match: Q2QQS5 (Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L++V+ Q++EL+
Sbjct: 211 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY 270

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy Swiss-Prot
Match: Q8GYM6 (Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-05
Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 3   FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAA 62
           FN+YH    L    ++F             L  +A  F N    LR+SL LQFKPH IAA
Sbjct: 173 FNVYHPYKPLVEAIKKFK-------VAQNALAQVAWNFVND--GLRTSLCLQFKPHHIAA 232

Query: 63  GAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           GA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 233 GAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy TrEMBL
Match: A0A6J1KZ23 (cyclin-T1-3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498908 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.8e-23
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy TrEMBL
Match: A0A6J1H3Q1 (cyclin-T1-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460134 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNI QEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIFQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy TrEMBL
Match: A0A6J1KBY0 (cyclin-T1-5-like OS=Cucurbita maxima OX=3661 GN=LOC111494205 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-22
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLL++DFAPYQNILQEFQATP
Sbjct: 305 ILVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLNMDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy TrEMBL
Match: A0A6J1EUR8 (cyclin-T1-5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436799 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-22
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLL++DFAPYQNILQEFQATP
Sbjct: 305 ILVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLNMDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. ExPASy TrEMBL
Match: A0A0A0KEU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425065 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.4e-22
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 33  LLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAI 92
           +L   +LFS    WLRSSLWLQFKP QIAAGAAYLSAKLL++DFAPYQNILQEFQATPAI
Sbjct: 18  ILPELLLFS----WLRSSLWLQFKPQQIAAGAAYLSAKLLNMDFAPYQNILQEFQATPAI 77

Query: 93  LQDVAQQLMELF 105
           LQDVAQQLMELF
Sbjct: 78  LQDVAQQLMELF 85

[Close]

BLAST of CmaCh17G002500.1 vs. NCBI nr
Match: KAG6574995.1 (Cyclin-T1-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 328 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 387

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 388 AILQDVAQQLMELF 398

[Close]

BLAST of CmaCh17G002500.1 vs. NCBI nr
Match: XP_023006030.1 (cyclin-T1-3-like isoform X1 [Cucurbita maxima] >XP_023006031.1 cyclin-T1-3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. NCBI nr
Match: XP_023547552.1 (cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547553.1 cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. NCBI nr
Match: KAG7013566.1 (Cyclin-T1-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 359 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 418

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 419 AILQDVAQQLMELF 429

[Close]

BLAST of CmaCh17G002500.1 vs. NCBI nr
Match: XP_022959015.1 (cyclin-T1-3-like isoform X1 [Cucurbita moschata] >XP_022959016.1 cyclin-T1-3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 115.2 bits (287), Expect = 3.5e-22
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNI QEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIFQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

[Close]

BLAST of CmaCh17G002500.1 vs. TAIR 10
Match: AT4G19560.1 (Cyclin family protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF 105
           LR++L LQ++PH IAAGA  L+A+L  VD   Y+ +L QEF  TP  L+D+  Q++EL+
Sbjct: 205 LRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDITPCQLEDIRGQILELY 263

[Close]

BLAST of CmaCh17G002500.1 vs. TAIR 10
Match: AT5G45190.1 (Cyclin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-08
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 208 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

[Close]

BLAST of CmaCh17G002500.1 vs. TAIR 10
Match: AT5G45190.2 (Cyclin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-08
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 219 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 278

[Close]

BLAST of CmaCh17G002500.1 vs. TAIR 10
Match: AT4G19600.1 (Cyclin family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-06
Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 3   FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAA 62
           FN+YH    L    ++F             L  +A  F N    LR+SL LQFKPH IAA
Sbjct: 173 FNVYHPYKPLVEAIKKFK-------VAQNALAQVAWNFVND--GLRTSLCLQFKPHHIAA 232

Query: 63  GAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           GA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 233 GAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

The following BLAST results are available for this feature:

BLAST of CmaCh17G002500.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56YF8	1.9e-07	49.15	Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2	[more]
Q9FKE6	4.3e-07	51.67	Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2	[more]
Q2RAC5	1.2e-06	50.00	Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2	[more]
Q2QQS5	1.2e-06	50.00	Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1	[more]
Q8GYM6	1.8e-05	39.42	Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1	[more]

BLAST of CmaCh17G002500.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZ23	5.8e-23	85.14	cyclin-T1-3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498908 PE=3 SV=...	[more]
A0A6J1H3Q1	1.7e-22	83.78	cyclin-T1-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460134 PE=3 S...	[more]
A0A6J1KBY0	4.9e-22	82.43	cyclin-T1-5-like OS=Cucurbita maxima OX=3661 GN=LOC111494205 PE=3 SV=1	[more]
A0A6J1EUR8	4.9e-22	82.43	cyclin-T1-5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436799 PE=3 S...	[more]
A0A0A0KEU6	8.4e-22	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425065 PE=4 SV=1	[more]

BLAST of CmaCh17G002500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574995.1	1.2e-22	85.14	Cyclin-T1-4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023006030.1	1.2e-22	85.14	cyclin-T1-3-like isoform X1 [Cucurbita maxima] >XP_023006031.1 cyclin-T1-3-like ...	[more]
XP_023547552.1	1.2e-22	85.14	cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547553.1 cyclin-...	[more]
KAG7013566.1	1.2e-22	85.14	Cyclin-T1-4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022959015.1	3.5e-22	83.78	cyclin-T1-3-like isoform X1 [Cucurbita moschata] >XP_022959016.1 cyclin-T1-3-lik...	[more]

BLAST of CmaCh17G002500.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19560.1	1.4e-08	49.15	Cyclin family protein	[more]
AT5G45190.1	3.1e-08	51.67	Cyclin family protein	[more]
AT5G45190.2	3.1e-08	51.67	Cyclin family protein	[more]
AT4G19600.1	1.3e-06	39.42	Cyclin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 6..104 e-value: 8.4E-10 score: 40.7
None	No IPR available	PANTHER	PTHR10026:SF67	CYCLIN-T1-4-LIKE ISOFORM X1	coord: 32..104
IPR043198	Cyclin/Cyclin-like subunit Ssn8	PANTHER	PTHR10026	CYCLIN	coord: 32..104
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 33..104

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G002500	CmaCh17G002500	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G002500.1:exon:1648	CmaCh17G002500.1:exon:1648	exon
CmaCh17G002500.1:exon:1647	CmaCh17G002500.1:exon:1647	exon
CmaCh17G002500.1:exon:1646	CmaCh17G002500.1:exon:1646	exon
CmaCh17G002500.1:exon:1645	CmaCh17G002500.1:exon:1645	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G002500.1:three_prime_utr	CmaCh17G002500.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G002500.1:cds	CmaCh17G002500.1:cds_4	CDS
CmaCh17G002500.1:cds	CmaCh17G002500.1:cds_3	CDS
CmaCh17G002500.1:cds	CmaCh17G002500.1:cds_2	CDS
CmaCh17G002500.1:cds	CmaCh17G002500.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G002500.1	CmaCh17G002500.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
biological_process	GO:0032786	positive regulation of DNA-templated transcription, elongation
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0008024	cyclin/CDK positive transcription elongation factor complex
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity
molecular_function	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity