CmaCh17G002500 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh17G002500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCyclin T1
LocationCma_Chr17: 1284176 .. 1285907 (-)
RNA-Seq ExpressionCmaCh17G002500
SyntenyCmaCh17G002500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGGTAAGAAAAAACAATTTACTTTTATTCATTTGAAGTGAATGCTTGAAAGTTACTTTGCTCCTACTCTTAGTTTTTATTGTTATATACAATTGTGTATTTGGAGCTGATGTATTTTTTTGTTTTGAAGTACTGTTAGACATTGCCATCCTATTTAGTAATGGACTCAGATGGTTTGTTTAACTGTTTGATGCGTTCTTCAACAAGTGATGGTGGTAGTGGCAGTTGTATGGAAGGCTGATATGTGGTTTTTTTAGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATGTGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGGTACCTTGAAGAACTTCTGAATATTTTCTCACGTCCTATTATGTGATTGCTTTAAAAATTAAGATAACACTAACCATTTCTTCATTTTATTTTCACTCCTAAAATCGTGTGTTCAAGTCCTAGCCACGTTTATAGAGCAAAAAGTAGGTCTTGTTTGAGATATCATCTTTTTAGTTCAATATGTTTTTATTATTGAAAGATGTTTTCTATAGTTATGATCAGAGTTCAAGATTATATTGTAGTTGGAAATGATAACTTACAAGTGGGATTTTAGTAGAGCAAATTTAATTTTGAGAATAAACATATGATCCATGGAAATAAGCTATTGAAAAGTAAGAGAAATTCTCTTAGAAAGATAAGTTACTACCCATATTTGTTGTAGAAAACAGAATATTAGTTTTGAAAACAATCTCTTGAGCCCAACCTCTGGGCATGGGCTTTGAAAGGATAGGGGTGTGTTTTTGCCAGGCTTGTTGTAAGAATTTTGTGGTTATAATTCTTGTTTTACTTACTCAGGGGCTTGTTTTAGAATCTCAATGTTTGTCTTTGAAAAGAAGCTCCCAAGTTATGACGTGGTTTGTTTTTCACTCATGCTAAAATGCAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAAAGTGAAAGCTCGATAATGATGAAGCTTTTAGTCTGGTGAAATGATGTGCAATGATGGGTAAACATAACATATTTATGATTTAACATGAATCCTGACAGTCTTAAATGGTTAAATCCTGACAGTTTCCTTAGGTTATGTAGTGACTGTTGGTAGTTTTAACATGAATGGTTCTCAATTCATTTCCATGTGCAAAACAGTGGTTTAGAAGTACCGTAGGAAGACCTGTACTCAATTGGCGAACGGATGGTTATGTTATACAAAATGGCTCGCTTCTGATCTGCTCTGCTCTCTCCTTTAAATGTCATTGCCTTTTGATTCCTTTTTTTATTTATAGTCGTTCCGTCGTACATCTATTCCATAATGTTAGAATAGTTGATCCGCAGATATTCTCTTTTTTGGGCTTTCCCTTTCAAGCTCCTTCTCATGGTTTTAAAATGTGTCTTCTAGGGAAAAGTTTTCACATCTAGAGAATGTTTTGTTTTCCTCTTCAACCGATGTAAGATCTCACAATCCACCTCTTTTGGTGCTCATAGTCCCCGTTGACATTGATACCATTTGTAACAGCTCAAACTTCACTAACTTCTTTGAGTTTTTCCTTCTAG

mRNA sequence

ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTAGACATTGCCATCCTATTTAGTAATGGACTCAGATGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATGTGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAAAGTGAAAGCTCGATAATGATGAAGCTTTTAGTCTGGTGAAATGATGTGCAATGATGGGTAAACATAACATATTTATGATTTAACATGAATCCTGACAGTCTTAAATGGTTAAATCCTGACAGTTTCCTTAGGTTATGTAGTGACTGTTGGTAGTTTTAACATGAATGGTTCTCAATTCATTTCCATGTGCAAAACAGTGGTTTAGAAGTACCGTAGGAAGACCTGTACTCAATTGGCGAACGGATGGTTATGTTATACAAAATGGCTCGCTTCTGATCTGCTCTGCTCTCTCCTTTAAATGTCATTGCCTTTTGATTCCTTTTTTTATTTATAGTCGTTCCGTCGTACATCTATTCCATAATGTTAGAATAGTTGATCCGCAGATATTCTCTTTTTTGGGCTTTCCCTTTCAAGCTCCTTCTCATGGTTTTAAAATGTGTCTTCTAGGGAAAAGTTTTCACATCTAGAGAATGTTTTGTTTTCCTCTTCAACCGATGTAAGATCTCACAATCCACCTCTTTTGGTGCTCATAGTCCCCGTTGACATTGATACCATTTGTAACAGCTCAAACTTCACTAACTTCTTTGAGTTTTTCCTTCTAG

Coding sequence (CDS)

ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTAGACATTGCCATCCTATTTAGTAATGGACTCAGATGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATGTGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAA

Protein sequence

MGFNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
Homology
BLAST of CmaCh17G002500 vs. ExPASy Swiss-Prot
Match: Q56YF8 (Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-07
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF 105
           LR++L LQ++PH IAAGA  L+A+L  VD   Y+ +L QEF  TP  L+D+  Q++EL+
Sbjct: 205 LRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDITPCQLEDIRGQILELY 263

BLAST of CmaCh17G002500 vs. ExPASy Swiss-Prot
Match: Q9FKE6 (Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 208 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

BLAST of CmaCh17G002500 vs. ExPASy Swiss-Prot
Match: Q2RAC5 (Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L++V+ Q++EL+
Sbjct: 212 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY 271

BLAST of CmaCh17G002500 vs. ExPASy Swiss-Prot
Match: Q2QQS5 (Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L++V+ Q++EL+
Sbjct: 211 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELY 270

BLAST of CmaCh17G002500 vs. ExPASy Swiss-Prot
Match: Q8GYM6 (Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-05
Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 0

Query: 3   FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAA 62
           FN+YH    L    ++F             L  +A  F N    LR+SL LQFKPH IAA
Sbjct: 173 FNVYHPYKPLVEAIKKFK-------VAQNALAQVAWNFVND--GLRTSLCLQFKPHHIAA 232

Query: 63  GAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           GA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 233 GAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

BLAST of CmaCh17G002500 vs. ExPASy TrEMBL
Match: A0A6J1KZ23 (cyclin-T1-3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498908 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.8e-23
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. ExPASy TrEMBL
Match: A0A6J1H3Q1 (cyclin-T1-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460134 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNI QEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIFQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. ExPASy TrEMBL
Match: A0A6J1KBY0 (cyclin-T1-5-like OS=Cucurbita maxima OX=3661 GN=LOC111494205 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-22
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLL++DFAPYQNILQEFQATP
Sbjct: 305 ILVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLNMDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. ExPASy TrEMBL
Match: A0A6J1EUR8 (cyclin-T1-5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436799 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-22
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLL++DFAPYQNILQEFQATP
Sbjct: 305 ILVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLNMDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. ExPASy TrEMBL
Match: A0A0A0KEU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425065 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.4e-22
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 33  LLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAI 92
           +L   +LFS    WLRSSLWLQFKP QIAAGAAYLSAKLL++DFAPYQNILQEFQATPAI
Sbjct: 18  ILPELLLFS----WLRSSLWLQFKPQQIAAGAAYLSAKLLNMDFAPYQNILQEFQATPAI 77

Query: 93  LQDVAQQLMELF 105
           LQDVAQQLMELF
Sbjct: 78  LQDVAQQLMELF 85

BLAST of CmaCh17G002500 vs. NCBI nr
Match: KAG6574995.1 (Cyclin-T1-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 328 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 387

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 388 AILQDVAQQLMELF 398

BLAST of CmaCh17G002500 vs. NCBI nr
Match: XP_023006030.1 (cyclin-T1-3-like isoform X1 [Cucurbita maxima] >XP_023006031.1 cyclin-T1-3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. NCBI nr
Match: XP_023547552.1 (cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547553.1 cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. NCBI nr
Match: KAG7013566.1 (Cyclin-T1-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP
Sbjct: 359 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 418

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 419 AILQDVAQQLMELF 429

BLAST of CmaCh17G002500 vs. NCBI nr
Match: XP_022959015.1 (cyclin-T1-3-like isoform X1 [Cucurbita moschata] >XP_022959016.1 cyclin-T1-3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 115.2 bits (287), Expect = 3.5e-22
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 32  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATP 91
           +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNI QEFQATP
Sbjct: 305 MLVNLALNLISEG---LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIFQEFQATP 364

Query: 92  AILQDVAQQLMELF 105
           AILQDVAQQLMELF
Sbjct: 365 AILQDVAQQLMELF 375

BLAST of CmaCh17G002500 vs. TAIR 10
Match: AT4G19560.1 (Cyclin family protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF 105
           LR++L LQ++PH IAAGA  L+A+L  VD   Y+ +L QEF  TP  L+D+  Q++EL+
Sbjct: 205 LRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDITPCQLEDIRGQILELY 263

BLAST of CmaCh17G002500 vs. TAIR 10
Match: AT5G45190.1 (Cyclin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-08
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 208 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

BLAST of CmaCh17G002500 vs. TAIR 10
Match: AT5G45190.2 (Cyclin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-08
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 47  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 219 LRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 278

BLAST of CmaCh17G002500 vs. TAIR 10
Match: AT4G19600.1 (Cyclin family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-06
Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 0

Query: 3   FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAA 62
           FN+YH    L    ++F             L  +A  F N    LR+SL LQFKPH IAA
Sbjct: 173 FNVYHPYKPLVEAIKKFK-------VAQNALAQVAWNFVND--GLRTSLCLQFKPHHIAA 232

Query: 63  GAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF 105
           GA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Sbjct: 233 GAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELY 267

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q56YF81.9e-0749.15Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2[more]
Q9FKE64.3e-0751.67Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2[more]
Q2RAC51.2e-0650.00Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2[more]
Q2QQS51.2e-0650.00Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1[more]
Q8GYM61.8e-0539.42Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1KZ235.8e-2385.14cyclin-T1-3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498908 PE=3 SV=... [more]
A0A6J1H3Q11.7e-2283.78cyclin-T1-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460134 PE=3 S... [more]
A0A6J1KBY04.9e-2282.43cyclin-T1-5-like OS=Cucurbita maxima OX=3661 GN=LOC111494205 PE=3 SV=1[more]
A0A6J1EUR84.9e-2282.43cyclin-T1-5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436799 PE=3 S... [more]
A0A0A0KEU68.4e-2283.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425065 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6574995.11.2e-2285.14Cyclin-T1-4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023006030.11.2e-2285.14cyclin-T1-3-like isoform X1 [Cucurbita maxima] >XP_023006031.1 cyclin-T1-3-like ... [more]
XP_023547552.11.2e-2285.14cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547553.1 cyclin-... [more]
KAG7013566.11.2e-2285.14Cyclin-T1-4 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022959015.13.5e-2283.78cyclin-T1-3-like isoform X1 [Cucurbita moschata] >XP_022959016.1 cyclin-T1-3-lik... [more]
Match NameE-valueIdentityDescription
AT4G19560.11.4e-0849.15Cyclin family protein [more]
AT5G45190.13.1e-0851.67Cyclin family protein [more]
AT5G45190.23.1e-0851.67Cyclin family protein [more]
AT4G19600.11.3e-0639.42Cyclin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 6..104
e-value: 8.4E-10
score: 40.7
NoneNo IPR availablePANTHERPTHR10026:SF67CYCLIN-T1-4-LIKE ISOFORM X1coord: 32..104
IPR043198Cyclin/Cyclin-like subunit Ssn8PANTHERPTHR10026CYCLINcoord: 32..104
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 33..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G002500.1CmaCh17G002500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
biological_process GO:0032786 positive regulation of DNA-templated transcription, elongation
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0008024 cyclin/CDK positive transcription elongation factor complex
molecular_function GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity
molecular_function GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity