CmaCh16G009170.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G009170.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPyridoxal phosphate homeostasis protein
LocationCma_Chr16: 6916426 .. 6920790 (-)
Sequence length1203
RNA-Seq ExpressionCmaCh16G009170.1
SyntenyCmaCh16G009170.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTATCAAAAGGATATTAGAGACTCAATCAAAGCACAAAATATTAATTATTGGACAAAAACACTCCCTTGTAAACATTTTCCGGGGAGATTTCTGTGAACCACAAGGGAATGGAAACATGGAGATTGGCGAACATTAACAGCCAACGGCTTCCTTTCACTGTAATCGCATATTTCATTTCTTTTCCACTTCCTCCGCTGCCTGAACAGCAACAGGTCCGAGAAAAAAATCTCTCATATGGCAGCTCCACTGGTCGAAGGCGCAGCCGCCGCAGCTCTCCGATCGGTAATGAATCGAGCTCGGCAGGCGGCTGAGCGCTCTGGTCGCCGTTTCGATCAGGTCCGAGTCGTCGCAGTCTCGAAGACAAAGCCTGTGTCTCTCATTCGCCAAGTCTACGACGCCACACACCGCTGCTTCGGTGAGAACTACGTTCAAGAGATTATCGATAAAGCTCCTCAGGTGCCTTTTATTTTTCTAGGGCTTCGATTTGATTTATGTCTTTGAGTGCGCCATTTACTTCTGTCTATGCCTCTCTTTGCTTTCAGCTTCCTCAAGACATTGAATGGCATTTTATTGGGCATCTGCAGAGCAACAAAGTTAAATCGCTTCTGGGTACAGTCGGTCCTCTGTTCTCTTCTTCCATCGGCTTATTGTAGAGTTCTTGTTTGGAATTTCCACTTTAGAGGAATCTTCATAAGGATTAATGCTTTTCTTGATTCTTTCTATTGTTTTTGAAAATCTTGGTTAGATTAAAAGTTTCGGGATTGAGAATTGTGTCTAATTTGTGCTTAAACTCTAAAAATGTCTAAATGTTCCCTAAATTTGGAAGTGTATGATGAATTTCAATTCTATCTAACTGCTCATGCTATTTGAGACGCTAAAAGTTCAGATTTGATAGTAAGTGAAAGCTTAGGAGCGAATTAGAAAATGTGACTTATTAACACAAAATTGAAAGTTTGGAATGTGATCTATTAGACACAAACTGTGGAAGTTGGAAGTTCAGGACGGTAACTCAACGATAAATCTTACATAACAGAAAGCTTCTCTGCTTGCTGCTTTTACATTGTACGAAATTCTGTTAACCTCTAGACCTTGCAACTAAAAATATAGGAATTCTTGTGGAAAATAGTGATTGAATTGTAAAATTCACATTTTCAGCATGAGATCATTCTTTGTTGTTCATATCACATTTAGAAGTAGACTATTATATCATTTGCTTACAGAGGTGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCTGCAGCTGGAGTTCCAAACCTGGCCATGGTTGAGGGTGTAGATAATGAGAAGGTAAAGACTTAATCCAATTCTATTATATTTCTAAAAGGTAAGGTTACTTTCATTTTTATTATTGTGAAGCCTTTTTATTGAACAAGAAACTTATTCATATAATGAGACGGAATATTATTGATGAAGCTTAGTTGTATCACTTTTGGCAGTTTGGCCTTTTGCTGGGTATTATTGTACGTGCTGCCTTTAAAAATGGTACTTGAAATGTGATATAATGATCTCCATGCATGATAATAAACTACTTGTGGCTCCTATTTTTGGTTAAAAAATAACTTTTTACTATGCATGAACAATGTAGTTGGCAAAATTTATGGTTTTTTTTTCTCCCAGTAAAGAGCTGAATTTTCAGATGTTCTAAAGGAAAAAGGATGAAAGATGCTTAAATGTTCTGTCACTTTTAAGATTACTTGATGTGGTCATGCTGCTGCAGCTTGCAAATCATCTCGATCGTGCAGTTTCAAACCTCAGGAGGGATCCATTGAAGGTTCTAGTCCAAGTAAACACGAGTGGAGAAATATGTGAGTTGCACAGTTCTTTGATGTTTTTCTGCAAGATCATTCTGATAATTAGTTGAATAAGTCCTTTGATAATCATTCTCCCAGAAAACAAAGCCATATTTGGAACCCGGGGGGGATTTTATGTCTTGGATTAAAATTCTATGTATATGTAAAATCCTATTTCACTGTAGTCTAATGAACATTCAGTTTCACGAATAAAGTAATTTGCTTATCCGCTCTTGTTTTTTTGGATATCTTTACTGTCTTAATAACTTTGTCTACGCTTATAAAATTTCACATGTAACAAGTTTCTTTCTGTCAAACTTACACCCAATGAACCTTGATGCTTTTCCAAGCCTCAAGATTAAATTGCAACAGTTTATGTTTCATTCTTAAATCATAAAATATCTATTTCCATTTGGATTTACATCCTAAAAAAAGGAGTATCTAGAAAATGACTTGTGTGACAATTTGGCAGCTAAATCTGGGGTTGAGCCTTCTGGATGCATCGAACTTGCAAAGCATGTGAAGTTGCGTTGCCCACATCTAGAATTTTCTGGCTTAATGACAATAGGGATGCCAGATTATACTAGCACTCCAGAGAACTTTAAGGTTATATAATGTACTCTTTTCTTGTTTTGGTTAGATATTTTTACTCTACAGTGGAAGGTATGTACCCTTTTAAAGGGAAGAAAAAAGGGTTTAATCTATATATATATATGTATATATATATTCATCTAAATTCTTCGCTGTTCATCACATTCATCAGTTTAGAGTTTTCTTATTATATTCTCTGTTTTTCTCTCTTTCTTTTTTTCTAAAGACAAATTGTCTTCCTGATTTTCTAGACGCTGCTGGAATGTAGAGCCGAAGTCTGTAGGGCACTTGAAATGGCAGAAGAGCAGTGTGAACTGTCAATGGGAATGTCTGGTGATTTCGAGTTGGCGGTTAGTATTACCTAAACCTCTGTCTTTGCTTCTATTTCTCTACATGGTTTGGTTTCTAGGGTACCGACTTTGTAATGGCACAAGCCCACCGTTAGCAGATATTGTCCTCTTTGGACTCTCTCTTTTAGGCTTCCCCTTAAGGTTTTTAAAACCCGTCTGCTAGGGAGAGGTTTCCACACCCTTAATAAGGGTGTTTCATTCTCCACCCCCACCGATGTGGGATCTTACAACTGACCCCATACCCCACATTGTAAATTGTGTTTAATTGGAAAAATTATTTAATGTGGTGAACCATAATGTTTAGTTTTTCTCCTACATCTAAGGGTATAAAACTACCAAAATTATACTAGCTTCAATAAATGGGATAATGGAATAAGCTAGCTCAATAGTTGCATCTCTCTAATACATGGTTCTGAACCAAAGGGTAAACATTGTCGTTTTTGTTTATAGCAACAACAAGACAATATGTCGTGCTATGGGTGTAATGTAAGCAAGTTATTGGTTTTTTTAAACCAAAATCAATGCCCCAAGTCAATAGATTGATGAAAGAAAATAAAAAAATCGATACTAAAACTGATTATTGGAAGTCGAAGTGACTGCCATCGAAAAACTGAACCAACAGAACTGACAAGATCTAGTTGAACCATATAGTCTACATTTTGTGTTATAGTTCTGAAAACTGAACTGACTAACAAGTATATCTAGAATCGATCAAATTAACTCGTAGTGTTCCTTAATCTTTTTTGGGTTTGCACCCGGGTATTAAGAAGGTTGGCAATGGCTACAACAAAGAATTTTGATTTAGTTTAAACTTTTGATTTAGTTTAAACTTTTAGAATTGTGTCTAATAGTTTCTTAAATTTTATACCGTGTCGGATAGTTTATCAAATTTTCAACACTGTTTTATATTACAGATCGAAATGGGCAGCACCAATGTGAGAATTGGATCCACCATCTTCGGTCCGAGGGACTATGCAAAGAAGCAAGCTGATTAGCATCTATCTTTATTCATATTCATAGTTGAATTCAACAATATTTTAGTTCTTATTCCCCACAGGCAACGAATATGCCTTTCTGATCGATTCTCTGTCTCTTGAAGGGACGGGAATGCTTTAAATTAATAATGTAAAAACTGGAGGATCTTCGTCTTTATAAGAGATAAAAGAACGCATTAAATTAAATACAGAAAAAATGGAGCATCCTTCTTGCTCCTTGCTGCCTAA

mRNA sequence

GGTTATCAAAAGGATATTAGAGACTCAATCAAAGCACAAAATATTAATTATTGGACAAAAACACTCCCTTGTAAACATTTTCCGGGGAGATTTCTGTGAACCACAAGGGAATGGAAACATGGAGATTGGCGAACATTAACAGCCAACGGCTTCCTTTCACTGTAATCGCATATTTCATTTCTTTTCCACTTCCTCCGCTGCCTGAACAGCAACAGGTCCGAGAAAAAAATCTCTCATATGGCAGCTCCACTGGTCGAAGGCGCAGCCGCCGCAGCTCTCCGATCGGTAATGAATCGAGCTCGGCAGGCGGCTGAGCGCTCTGGTCGCCGTTTCGATCAGGTCCGAGTCGTCGCAGTCTCGAAGACAAAGCCTGTGTCTCTCATTCGCCAAGTCTACGACGCCACACACCGCTGCTTCGGTGAGAACTACGTTCAAGAGATTATCGATAAAGCTCCTCAGCTTCCTCAAGACATTGAATGGCATTTTATTGGGCATCTGCAGAGCAACAAAGTTAAATCGCTTCTGGCTGGAGTTCCAAACCTGGCCATGGTTGAGGGTGTAGATAATGAGAAGCTTGCAAATCATCTCGATCGTGCAGTTTCAAACCTCAGGAGGGATCCATTGAAGGTTCTAGTCCAAGTAAACACGAGTGGAGAAATATCTAAATCTGGGGTTGAGCCTTCTGGATGCATCGAACTTGCAAAGCATGTGAAGTTGCGTTGCCCACATCTAGAATTTTCTGGCTTAATGACAATAGGGATGCCAGATTATACTAGCACTCCAGAGAACTTTAAGACGCTGCTGGAATGTAGAGCCGAAGTCTGTAGGGCACTTGAAATGGCAGAAGAGCAGTGTGAACTGTCAATGGGAATGTCTGGTGATTTCGAGTTGGCGATCGAAATGGGCAGCACCAATGTGAGAATTGGATCCACCATCTTCGGTCCGAGGGACTATGCAAAGAAGCAAGCTGATTAGCATCTATCTTTATTCATATTCATAGTTGAATTCAACAATATTTTAGTTCTTATTCCCCACAGGCAACGAATATGCCTTTCTGATCGATTCTCTGTCTCTTGAAGGGACGGGAATGCTTTAAATTAATAATGTAAAAACTGGAGGATCTTCGTCTTTATAAGAGATAAAAGAACGCATTAAATTAAATACAGAAAAAATGGAGCATCCTTCTTGCTCCTTGCTGCCTAA

Coding sequence (CDS)

ATGGCAGCTCCACTGGTCGAAGGCGCAGCCGCCGCAGCTCTCCGATCGGTAATGAATCGAGCTCGGCAGGCGGCTGAGCGCTCTGGTCGCCGTTTCGATCAGGTCCGAGTCGTCGCAGTCTCGAAGACAAAGCCTGTGTCTCTCATTCGCCAAGTCTACGACGCCACACACCGCTGCTTCGGTGAGAACTACGTTCAAGAGATTATCGATAAAGCTCCTCAGCTTCCTCAAGACATTGAATGGCATTTTATTGGGCATCTGCAGAGCAACAAAGTTAAATCGCTTCTGGCTGGAGTTCCAAACCTGGCCATGGTTGAGGGTGTAGATAATGAGAAGCTTGCAAATCATCTCGATCGTGCAGTTTCAAACCTCAGGAGGGATCCATTGAAGGTTCTAGTCCAAGTAAACACGAGTGGAGAAATATCTAAATCTGGGGTTGAGCCTTCTGGATGCATCGAACTTGCAAAGCATGTGAAGTTGCGTTGCCCACATCTAGAATTTTCTGGCTTAATGACAATAGGGATGCCAGATTATACTAGCACTCCAGAGAACTTTAAGACGCTGCTGGAATGTAGAGCCGAAGTCTGTAGGGCACTTGAAATGGCAGAAGAGCAGTGTGAACTGTCAATGGGAATGTCTGGTGATTTCGAGTTGGCGATCGAAATGGGCAGCACCAATGTGAGAATTGGATCCACCATCTTCGGTCCGAGGGACTATGCAAAGAAGCAAGCTGATTAG

Protein sequence

MAAPLVEGAAAAALRSVMNRARQAAERSGRRFDQVRVVAVSKTKPVSLIRQVYDATHRCFGENYVQEIIDKAPQLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRAVSNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGMPDYTSTPENFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGPRDYAKKQAD
Homology
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BLAST of CmaCh16G009170.1 vs. ExPASy Swiss-Prot
Match: Q3T0G5 (Pyridoxal phosphate homeostasis protein OS=Bos taurus OX=9913 GN=PLPBP PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-55
Identity = 126/241 (52.28%), Postives = 160/241 (66.39%), Query Frame = 0 

Query: 13  ALRSVMNRARQAAERSGRRFD--QVRVVAVSKTKPVSLIRQVYDATHRCFGENYVQEIID 72
           ALR+V  R +QA  R  R     Q R+VAVSKTKP  ++ + Y    R FGENYVQE+++
Sbjct: 16  ALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLE 75

Query: 73  KA--PQLPQ---DIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRAVSNL- 132
           KA  PQ+     +I+WHFIGHLQ   V  L+A VPNL+M+E VD+ KLA+ ++ A     
Sbjct: 76  KASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKG 135

Query: 133 RRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGM--PDYTSTP 192
             + LKV+VQ+NTSGE SK G+ P+    L +H+  +CP LEF GLMTIG    D +  P
Sbjct: 136 SPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGP 195

Query: 193 E-NFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGPRDYAK 243
             +F+ LL  R E+CR L    EQ ELSMGMS DF+ AIE+GSTNVRIGSTIFG RDY+K
Sbjct: 196 NPDFQVLLSLREELCRKLGAPPEQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSK 255

[Close]
BLAST of CmaCh16G009170.1 vs. ExPASy Swiss-Prot
Match: Q9Z2Y8 (Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.6e-55
Identity = 126/243 (51.85%), Postives = 163/243 (67.08%), Query Frame = 0 

Query: 13  ALRSVMNRARQAAERSGRRFD--QVRVVAVSKTKPVSLIRQVYDATHRCFGENYVQEIID 72
           ALR+V  R +Q+  R  R     Q R+VAVSKTKP  ++ + Y    R FGENYVQE+++
Sbjct: 16  ALRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLE 75

Query: 73  KA--PQLPQ---DIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRAVSNL- 132
           KA  P++     +I+WHFIGHLQ   V  L+A VPNL+M+E VD+ KLA+ ++ +     
Sbjct: 76  KASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKG 135

Query: 133 RRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGM--PDYTSTP 192
             +PLKV+VQ+NTSGE SK G+ PS  I + +H+K  CP LEF GLMTIG    D +  P
Sbjct: 136 PTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGP 195

Query: 193 E-NFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGPRDYAK 245
             +F+ LL  R E+C  L +  EQ ELSMGMS DF+ AIE+GSTNVRIGSTIFG RDY+K
Sbjct: 196 NPDFQRLLTLRRELCEKLGIPVEQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSK 255

[Close]
BLAST of CmaCh16G009170.1 vs. ExPASy Swiss-Prot
Match: O94903 (Pyridoxal phosphate homeostasis protein OS=Homo sapiens OX=9606 GN=PLPBP PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-54
Identity = 126/250 (50.40%), Postives = 163/250 (65.20%), Query Frame = 0 

Query: 7   EGAAAAALRSVMNRARQAAERSGRRFD--QVRVVAVSKTKPVSLIRQVYDATHRCFGENY 66
           E     ALR+V  R +QA  R  R     Q R+VAVSKTKP  ++ + Y    R FGENY
Sbjct: 10  ELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENY 69

Query: 67  VQEIIDKAP-----QLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDR 126
           VQE+++KA       L  +I+WHFIGHLQ   V  L+A VPNL M+E VD+ KLA   D+
Sbjct: 70  VQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLA---DK 129

Query: 127 AVSNLRR----DPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGM 186
             S+ +R    + LKV+VQ+NTSGE SK G+ PS  I + +H+  +CP+LEF GLMTIG 
Sbjct: 130 VNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGS 189

Query: 187 --PDYTSTPE-NFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGST 243
              D +  P  +F+ LL  R E+C+ L +  +Q ELSMGMS DF+ A+E+GSTNVRIGST
Sbjct: 190 FGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGST 249

[Close]
BLAST of CmaCh16G009170.1 vs. ExPASy Swiss-Prot
Match: Q5R4Z1 (Pyridoxal phosphate homeostasis protein OS=Pongo abelii OX=9601 GN=PLPBP PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 122/249 (49.00%), Postives = 159/249 (63.86%), Query Frame = 0 

Query: 7   EGAAAAALRSVMNRARQAAERSGRRFD--QVRVVAVSKTKPVSLIRQVYDATHRCFGENY 66
           E     ALR+V  R +QA     R     Q R+VAVSKTKP  ++ + Y    R FGENY
Sbjct: 10  ELGVGCALRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENY 69

Query: 67  VQEIIDKAP-----QLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDR 126
           VQE+++KA       L  +I+WHFIGHLQ   V  L+A VPNL ++E VD+ KLA  ++ 
Sbjct: 70  VQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNS 129

Query: 127 AVSNL-RRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGM--P 186
           +       + LKV+VQ+NTSGE SK G+ PS  I + +H+  +CP+LEF GLMTIG    
Sbjct: 130 SWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGH 189

Query: 187 DYTSTPE-NFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFG 245
           D +  P  +F+ LL  R E+C+ L +  +Q ELSMGMS DF+ AIE+GSTNVRIGS IFG
Sbjct: 190 DLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSMIFG 249

[Close]
BLAST of CmaCh16G009170.1 vs. ExPASy Swiss-Prot
Match: Q1ZXI6 (Pyridoxal phosphate homeostasis protein OS=Dictyostelium discoideum OX=44689 GN=prosc PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 4.3e-50
Identity = 111/247 (44.94%), Postives = 157/247 (63.56%), Query Frame = 0 

Query: 14  LRSVMNRARQAAERSGRRFDQ--VRVVAVSKTKPVSLIRQVYDATHRCFGENYVQEIIDK 73
           L S     +   E    +FD+  V++VAVSKTKP  +IR +YD  HR FGENY+QE++ K
Sbjct: 10  LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSK 69

Query: 74  APQLPQ--DIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRAV-------- 133
           + +L +  +I+WHFIG +QSNK K +L  V NL +VE V+N+K+ + L +++        
Sbjct: 70  SEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNN 129

Query: 134 --SNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHV--KLRCPH-LEFSGLMTIGMP 193
             +N     L +++QVNTSGE SKSG +P  C++L KH      C + L F GLMTIG P
Sbjct: 130 NNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNP 189

Query: 194 DYTSTPENFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGP 244
           + T    +FK L++C+  + + L +  +  ELSMGMS DFE AIE GST+VR+GS IFG 
Sbjct: 190 NATPDQPDFKCLVDCKNNISKQLNIPLDSIELSMGMSHDFEPAIEFGSTSVRVGSAIFGE 249

[Close]
BLAST of CmaCh16G009170.1 vs. TAIR 10
Match: AT4G26860.1 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type )

HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-109
Identity = 193/242 (79.75%), Postives = 216/242 (89.26%), Query Frame = 0 

Query: 1   MAAPLVEGAAAAALRSVMNRARQAAERSGRRFDQVRVVAVSKTKPVSLIRQVYDATHRCF 60
           MAAP VE   A+ALRSV+ RAR+AAE+ GR  ++VRV+ VSKTKPVSLIRQ+YDA HRCF
Sbjct: 1   MAAPAVEATVASALRSVILRARKAAEQVGRDPERVRVLPVSKTKPVSLIRQIYDAGHRCF 60

Query: 61  GENYVQEIIDKAPQLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRA 120
           GENYVQEIIDKAPQLP+DIEWHF+GHLQSNK K+LL GVPNLAMV GVD EK+ANHLDRA
Sbjct: 61  GENYVQEIIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRA 120

Query: 121 VSNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGMPDYTS 180
           VSNL R PLKVLVQVNTSGE+SKSG+EPS  +ELA+HVK  CP+L FSGLMTIGMPDYTS
Sbjct: 121 VSNLGRHPLKVLVQVNTSGEVSKSGIEPSSVVELARHVKHHCPNLVFSGLMTIGMPDYTS 180

Query: 181 TPENFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGPRDYA 240
           TPENF+TL  CRA+VC+AL MAE+Q ELSMGMSGDFELAIEMGSTNVR+GSTIFGPR+Y 
Sbjct: 181 TPENFRTLSNCRADVCKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVGSTIFGPREYP 240

Query: 241 KK 243
           KK
Sbjct: 241 KK 242

[Close]
BLAST of CmaCh16G009170.1 vs. TAIR 10
Match: AT4G26860.2 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type )

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-106
Identity = 193/252 (76.59%), Postives = 216/252 (85.71%), Query Frame = 0 

Query: 1   MAAPLVEGAAAAALRSVMNRARQAAERSGRRFDQVRVVAVSKTKPVSLIRQVYDATHRCF 60
           MAAP VE   A+ALRSV+ RAR+AAE+ GR  ++VRV+ VSKTKPVSLIRQ+YDA HRCF
Sbjct: 1   MAAPAVEATVASALRSVILRARKAAEQVGRDPERVRVLPVSKTKPVSLIRQIYDAGHRCF 60

Query: 61  GENYVQEIIDKAPQLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRA 120
           GENYVQEIIDKAPQLP+DIEWHF+GHLQSNK K+LL GVPNLAMV GVD EK+ANHLDRA
Sbjct: 61  GENYVQEIIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRA 120

Query: 121 VSNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGMPDYTS 180
           VSNL R PLKVLVQVNTSGE+SKSG+EPS  +ELA+HVK  CP+L FSGLMTIGMPDYTS
Sbjct: 121 VSNLGRHPLKVLVQVNTSGEVSKSGIEPSSVVELARHVKHHCPNLVFSGLMTIGMPDYTS 180

Query: 181 TPENFK----------TLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIG 240
           TPENF+          TL  CRA+VC+AL MAE+Q ELSMGMSGDFELAIEMGSTNVR+G
Sbjct: 181 TPENFRVYSFPHKPGQTLSNCRADVCKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVG 240

Query: 241 STIFGPRDYAKK 243
           STIFGPR+Y KK
Sbjct: 241 STIFGPREYPKK 252

[Close]
BLAST of CmaCh16G009170.1 vs. TAIR 10
Match: AT1G11930.2 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type )

HSP 1 Score: 360.9 bits (925), Expect = 8.0e-100
Identity = 183/242 (75.62%), Postives = 204/242 (84.30%), Query Frame = 0 

Query: 1   MAAPLVEGAAAAALRSVMNRARQAAERSGRRFDQVRVVAVSKTKPVSLIRQVYDATHRCF 60
           M+A  ++G   AALRSV  R  QAAE++GR  DQ+RVVAVSKTKPVSLIRQVYDA  R F
Sbjct: 16  MSAAAIDG--VAALRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQVYDAGQRSF 75

Query: 61  GENYVQEIIDKAPQLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRA 120
           GENYVQEII+KAPQLP+DIEWHFIG+LQSNKVK LL+GVPNL  VE VD+EK+AN LDR 
Sbjct: 76  GENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRV 135

Query: 121 VSNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGMPDYTS 180
           V N+ R PLKV VQVNTSGE SK GVEPSGC+ LAKHVK  C +LEFSGLMTIGM DYTS
Sbjct: 136 VGNIGRKPLKVFVQVNTSGEDSKFGVEPSGCVGLAKHVKEACSNLEFSGLMTIGMADYTS 195

Query: 181 TPENFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGPRDYA 240
           TPENFK L +CR+EVC+ L + EEQCELSMGMSGDFELAIE+GSTNVRIGSTIFG R+Y 
Sbjct: 196 TPENFKLLAKCRSEVCKELGIPEEQCELSMGMSGDFELAIELGSTNVRIGSTIFGAREYP 255

Query: 241 KK 243
           KK
Sbjct: 256 KK 255

[Close]
BLAST of CmaCh16G009170.1 vs. TAIR 10
Match: AT1G11930.1 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type )

HSP 1 Score: 355.9 bits (912), Expect = 2.6e-98
Identity = 183/244 (75.00%), Postives = 204/244 (83.61%), Query Frame = 0 

Query: 1   MAAPLVEGAAAAALRSVMNRARQAAERSGRRFDQVRVVAVSKTKPVSLIRQVYDATHRCF 60
           M+A  ++G   AALRSV  R  QAAE++GR  DQ+RVVAVSKTKPVSLIRQVYDA  R F
Sbjct: 16  MSAAAIDG--VAALRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQVYDAGQRSF 75

Query: 61  GENYVQEIIDKAPQLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRA 120
           GENYVQEII+KAPQLP+DIEWHFIG+LQSNKVK LL+GVPNL  VE VD+EK+AN LDR 
Sbjct: 76  GENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRV 135

Query: 121 VSNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGMPDYTS 180
           V N+ R PLKV VQVNTSGE SK GVEPSGC+ LAKHVK  C +LEFSGLMTIGM DYTS
Sbjct: 136 VGNIGRKPLKVFVQVNTSGEDSKFGVEPSGCVGLAKHVKEACSNLEFSGLMTIGMADYTS 195

Query: 181 TPENFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELA--IEMGSTNVRIGSTIFGPRD 240
           TPENFK L +CR+EVC+ L + EEQCELSMGMSGDFELA  IE+GSTNVRIGSTIFG R+
Sbjct: 196 TPENFKLLAKCRSEVCKELGIPEEQCELSMGMSGDFELALQIELGSTNVRIGSTIFGARE 255

Query: 241 YAKK 243
           Y KK
Sbjct: 256 YPKK 257

The following BLAST results are available for this feature:
BLAST of CmaCh16G009170.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3T0G54.5e-5552.28Pyridoxal phosphate homeostasis protein OS=Bos taurus OX=9913 GN=PLPBP PE=2 SV=1[more]
Q9Z2Y87.6e-5551.85Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=1 S... [more]
O949031.3e-5450.40Pyridoxal phosphate homeostasis protein OS=Homo sapiens OX=9606 GN=PLPBP PE=1 SV... [more]
Q5R4Z12.1e-5249.00Pyridoxal phosphate homeostasis protein OS=Pongo abelii OX=9601 GN=PLPBP PE=2 SV... [more]
Q1ZXI64.3e-5044.94Pyridoxal phosphate homeostasis protein OS=Dictyostelium discoideum OX=44689 GN=... [more]
BLAST of CmaCh16G009170.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26860.14.2e-10979.75Predicted pyridoxal phosphate-dependent enzyme, YBL036C type [more]
AT4G26860.21.2e-10676.59Predicted pyridoxal phosphate-dependent enzyme, YBL036C type [more]
AT1G11930.28.0e-10075.62Predicted pyridoxal phosphate-dependent enzyme, YBL036C type [more]
AT1G11930.12.6e-9875.00Predicted pyridoxal phosphate-dependent enzyme, YBL036C type [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001608Alanine racemase, N-terminalPFAMPF01168Ala_racemase_Ncoord: 14..237
e-value: 2.8E-21
score: 76.2
IPR011078Pyridoxal phosphate homeostasis proteinTIGRFAMTIGR00044TIGR00044coord: 19..237
e-value: 1.6E-59
score: 199.2
IPR011078Pyridoxal phosphate homeostasis proteinPIRSFPIRSF004848YBL036c_PLPDEIIIcoord: 1..243
e-value: 1.7E-77
score: 258.1
IPR011078Pyridoxal phosphate homeostasis proteinPANTHERPTHR10146PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEINcoord: 7..242
IPR011078Pyridoxal phosphate homeostasis proteinPROSITEPS01211UPF0001coord: 81..95
IPR011078Pyridoxal phosphate homeostasis proteinHAMAPMF_02087PLP_homeostasiscoord: 12..236
score: 30.037796
IPR029066PLP-binding barrelGENE3D3.20.20.10Alanine racemasecoord: 4..245
e-value: 2.6E-94
score: 317.6
IPR029066PLP-binding barrelSUPERFAMILY51419PLP-binding barrelcoord: 11..235
NoneNo IPR availablePIRSRPIRSR004848-1PIRSR004848-1coord: 27..235
e-value: 1.5E-54
score: 182.5
NoneNo IPR availablePANTHERPTHR10146:SF15PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEINcoord: 7..242
NoneNo IPR availableCDDcd06822PLPDE_III_YBL036c_eukcoord: 14..235
e-value: 3.68845E-138
score: 385.399

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh16G009170CmaCh16G009170gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G009170.1:exon:212CmaCh16G009170.1:exon:212exon
CmaCh16G009170.1:exon:211CmaCh16G009170.1:exon:211exon
CmaCh16G009170.1:exon:210CmaCh16G009170.1:exon:210exon
CmaCh16G009170.1:exon:209CmaCh16G009170.1:exon:209exon
CmaCh16G009170.1:exon:208CmaCh16G009170.1:exon:208exon
CmaCh16G009170.1:exon:207CmaCh16G009170.1:exon:207exon
CmaCh16G009170.1:exon:206CmaCh16G009170.1:exon:206exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G009170.1:three_prime_utrCmaCh16G009170.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G009170.1:cdsCmaCh16G009170.1:cds_7CDS
CmaCh16G009170.1:cdsCmaCh16G009170.1:cds_6CDS
CmaCh16G009170.1:cdsCmaCh16G009170.1:cds_5CDS
CmaCh16G009170.1:cdsCmaCh16G009170.1:cds_4CDS
CmaCh16G009170.1:cdsCmaCh16G009170.1:cds_3CDS
CmaCh16G009170.1:cdsCmaCh16G009170.1:cds_2CDS
CmaCh16G009170.1:cdsCmaCh16G009170.1:cdsCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G009170.1:five_prime_utrCmaCh16G009170.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh16G009170.1CmaCh16G009170.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016829 lyase activity