CmaCh16G009170 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTATCAAAAGGATATTAGAGACTCAATCAAAGCACAAAATATTAATTATTGGACAAAAACACTCCCTTGTAAACATTTTCCGGGGAGATTTCTGTGAACCACAAGGGAATGGAAACATGGAGATTGGCGAACATTAACAGCCAACGGCTTCCTTTCACTGTAATCGCATATTTCATTTCTTTTCCACTTCCTCCGCTGCCTGAACAGCAACAGGTCCGAGAAAAAAATCTCTCATATGGCAGCTCCACTGGTCGAAGGCGCAGCCGCCGCAGCTCTCCGATCGGTAATGAATCGAGCTCGGCAGGCGGCTGAGCGCTCTGGTCGCCGTTTCGATCAGGTCCGAGTCGTCGCAGTCTCGAAGACAAAGCCTGTGTCTCTCATTCGCCAAGTCTACGACGCCACACACCGCTGCTTCGGTGAGAACTACGTTCAAGAGATTATCGATAAAGCTCCTCAGGTGCCTTTTATTTTTCTAGGGCTTCGATTTGATTTATGTCTTTGAGTGCGCCATTTACTTCTGTCTATGCCTCTCTTTGCTTTCAGCTTCCTCAAGACATTGAATGGCATTTTATTGGGCATCTGCAGAGCAACAAAGTTAAATCGCTTCTGGGTACAGTCGGTCCTCTGTTCTCTTCTTCCATCGGCTTATTGTAGAGTTCTTGTTTGGAATTTCCACTTTAGAGGAATCTTCATAAGGATTAATGCTTTTCTTGATTCTTTCTATTGTTTTTGAAAATCTTGGTTAGATTAAAAGTTTCGGGATTGAGAATTGTGTCTAATTTGTGCTTAAACTCTAAAAATGTCTAAATGTTCCCTAAATTTGGAAGTGTATGATGAATTTCAATTCTATCTAACTGCTCATGCTATTTGAGACGCTAAAAGTTCAGATTTGATAGTAAGTGAAAGCTTAGGAGCGAATTAGAAAATGTGACTTATTAACACAAAATTGAAAGTTTGGAATGTGATCTATTAGACACAAACTGTGGAAGTTGGAAGTTCAGGACGGTAACTCAACGATAAATCTTACATAACAGAAAGCTTCTCTGCTTGCTGCTTTTACATTGTACGAAATTCTGTTAACCTCTAGACCTTGCAACTAAAAATATAGGAATTCTTGTGGAAAATAGTGATTGAATTGTAAAATTCACATTTTCAGCATGAGATCATTCTTTGTTGTTCATATCACATTTAGAAGTAGACTATTATATCATTTGCTTACAGAGGTGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCTGCAGCTGGAGTTCCAAACCTGGCCATGGTTGAGGGTGTAGATAATGAGAAGGTAAAGACTTAATCCAATTCTATTATATTTCTAAAAGGTAAGGTTACTTTCATTTTTATTATTGTGAAGCCTTTTTATTGAACAAGAAACTTATTCATATAATGAGACGGAATATTATTGATGAAGCTTAGTTGTATCACTTTTGGCAGTTTGGCCTTTTGCTGGGTATTATTGTACGTGCTGCCTTTAAAAATGGTACTTGAAATGTGATATAATGATCTCCATGCATGATAATAAACTACTTGTGGCTCCTATTTTTGGTTAAAAAATAACTTTTTACTATGCATGAACAATGTAGTTGGCAAAATTTATGGTTTTTTTTTCTCCCAGTAAAGAGCTGAATTTTCAGATGTTCTAAAGGAAAAAGGATGAAAGATGCTTAAATGTTCTGTCACTTTTAAGATTACTTGATGTGGTCATGCTGCTGCAGCTTGCAAATCATCTCGATCGTGCAGTTTCAAACCTCAGGAGGGATCCATTGAAGGTTCTAGTCCAAGTAAACACGAGTGGAGAAATATGTGAGTTGCACAGTTCTTTGATGTTTTTCTGCAAGATCATTCTGATAATTAGTTGAATAAGTCCTTTGATAATCATTCTCCCAGAAAACAAAGCCATATTTGGAACCCGGGGGGGATTTTATGTCTTGGATTAAAATTCTATGTATATGTAAAATCCTATTTCACTGTAGTCTAATGAACATTCAGTTTCACGAATAAAGTAATTTGCTTATCCGCTCTTGTTTTTTTGGATATCTTTACTGTCTTAATAACTTTGTCTACGCTTATAAAATTTCACATGTAACAAGTTTCTTTCTGTCAAACTTACACCCAATGAACCTTGATGCTTTTCCAAGCCTCAAGATTAAATTGCAACAGTTTATGTTTCATTCTTAAATCATAAAATATCTATTTCCATTTGGATTTACATCCTAAAAAAAGGAGTATCTAGAAAATGACTTGTGTGACAATTTGGCAGCTAAATCTGGGGTTGAGCCTTCTGGATGCATCGAACTTGCAAAGCATGTGAAGTTGCGTTGCCCACATCTAGAATTTTCTGGCTTAATGACAATAGGGATGCCAGATTATACTAGCACTCCAGAGAACTTTAAGGTTATATAATGTACTCTTTTCTTGTTTTGGTTAGATATTTTTACTCTACAGTGGAAGGTATGTACCCTTTTAAAGGGAAGAAAAAAGGGTTTAATCTATATATATATATGTATATATATATTCATCTAAATTCTTCGCTGTTCATCACATTCATCAGTTTAGAGTTTTCTTATTATATTCTCTGTTTTTCTCTCTTTCTTTTTTTCTAAAGACAAATTGTCTTCCTGATTTTCTAGACGCTGCTGGAATGTAGAGCCGAAGTCTGTAGGGCACTTGAAATGGCAGAAGAGCAGTGTGAACTGTCAATGGGAATGTCTGGTGATTTCGAGTTGGCGGTTAGTATTACCTAAACCTCTGTCTTTGCTTCTATTTCTCTACATGGTTTGGTTTCTAGGGTACCGACTTTGTAATGGCACAAGCCCACCGTTAGCAGATATTGTCCTCTTTGGACTCTCTCTTTTAGGCTTCCCCTTAAGGTTTTTAAAACCCGTCTGCTAGGGAGAGGTTTCCACACCCTTAATAAGGGTGTTTCATTCTCCACCCCCACCGATGTGGGATCTTACAACTGACCCCATACCCCACATTGTAAATTGTGTTTAATTGGAAAAATTATTTAATGTGGTGAACCATAATGTTTAGTTTTTCTCCTACATCTAAGGGTATAAAACTACCAAAATTATACTAGCTTCAATAAATGGGATAATGGAATAAGCTAGCTCAATAGTTGCATCTCTCTAATACATGGTTCTGAACCAAAGGGTAAACATTGTCGTTTTTGTTTATAGCAACAACAAGACAATATGTCGTGCTATGGGTGTAATGTAAGCAAGTTATTGGTTTTTTTAAACCAAAATCAATGCCCCAAGTCAATAGATTGATGAAAGAAAATAAAAAAATCGATACTAAAACTGATTATTGGAAGTCGAAGTGACTGCCATCGAAAAACTGAACCAACAGAACTGACAAGATCTAGTTGAACCATATAGTCTACATTTTGTGTTATAGTTCTGAAAACTGAACTGACTAACAAGTATATCTAGAATCGATCAAATTAACTCGTAGTGTTCCTTAATCTTTTTTGGGTTTGCACCCGGGTATTAAGAAGGTTGGCAATGGCTACAACAAAGAATTTTGATTTAGTTTAAACTTTTGATTTAGTTTAAACTTTTAGAATTGTGTCTAATAGTTTCTTAAATTTTATACCGTGTCGGATAGTTTATCAAATTTTCAACACTGTTTTATATTACAGATCGAAATGGGCAGCACCAATGTGAGAATTGGATCCACCATCTTCGGTCCGAGGGACTATGCAAAGAAGCAAGCTGATTAGCATCTATCTTTATTCATATTCATAGTTGAATTCAACAATATTTTAGTTCTTATTCCCCACAGGCAACGAATATGCCTTTCTGATCGATTCTCTGTCTCTTGAAGGGACGGGAATGCTTTAAATTAATAATGTAAAAACTGGAGGATCTTCGTCTTTATAAGAGATAAAAGAACGCATTAAATTAAATACAGAAAAAATGGAGCATCCTTCTTGCTCCTTGCTGCCTAA GGTTATCAAAAGGATATTAGAGACTCAATCAAAGCACAAAATATTAATTATTGGACAAAAACACTCCCTTGTAAACATTTTCCGGGGAGATTTCTGTGAACCACAAGGGAATGGAAACATGGAGATTGGCGAACATTAACAGCCAACGGCTTCCTTTCACTGTAATCGCATATTTCATTTCTTTTCCACTTCCTCCGCTGCCTGAACAGCAACAGGTCCGAGAAAAAAATCTCTCATATGGCAGCTCCACTGGTCGAAGGCGCAGCCGCCGCAGCTCTCCGATCGGTAATGAATCGAGCTCGGCAGGCGGCTGAGCGCTCTGGTCGCCGTTTCGATCAGGTCCGAGTCGTCGCAGTCTCGAAGACAAAGCCTGTGTCTCTCATTCGCCAAGTCTACGACGCCACACACCGCTGCTTCGGTGAGAACTACGTTCAAGAGATTATCGATAAAGCTCCTCAGCTTCCTCAAGACATTGAATGGCATTTTATTGGGCATCTGCAGAGCAACAAAGTTAAATCGCTTCTGGCTGGAGTTCCAAACCTGGCCATGGTTGAGGGTGTAGATAATGAGAAGCTTGCAAATCATCTCGATCGTGCAGTTTCAAACCTCAGGAGGGATCCATTGAAGGTTCTAGTCCAAGTAAACACGAGTGGAGAAATATCTAAATCTGGGGTTGAGCCTTCTGGATGCATCGAACTTGCAAAGCATGTGAAGTTGCGTTGCCCACATCTAGAATTTTCTGGCTTAATGACAATAGGGATGCCAGATTATACTAGCACTCCAGAGAACTTTAAGACGCTGCTGGAATGTAGAGCCGAAGTCTGTAGGGCACTTGAAATGGCAGAAGAGCAGTGTGAACTGTCAATGGGAATGTCTGGTGATTTCGAGTTGGCGATCGAAATGGGCAGCACCAATGTGAGAATTGGATCCACCATCTTCGGTCCGAGGGACTATGCAAAGAAGCAAGCTGATTAGCATCTATCTTTATTCATATTCATAGTTGAATTCAACAATATTTTAGTTCTTATTCCCCACAGGCAACGAATATGCCTTTCTGATCGATTCTCTGTCTCTTGAAGGGACGGGAATGCTTTAAATTAATAATGTAAAAACTGGAGGATCTTCGTCTTTATAAGAGATAAAAGAACGCATTAAATTAAATACAGAAAAAATGGAGCATCCTTCTTGCTCCTTGCTGCCTAA ATGGCAGCTCCACTGGTCGAAGGCGCAGCCGCCGCAGCTCTCCGATCGGTAATGAATCGAGCTCGGCAGGCGGCTGAGCGCTCTGGTCGCCGTTTCGATCAGGTCCGAGTCGTCGCAGTCTCGAAGACAAAGCCTGTGTCTCTCATTCGCCAAGTCTACGACGCCACACACCGCTGCTTCGGTGAGAACTACGTTCAAGAGATTATCGATAAAGCTCCTCAGCTTCCTCAAGACATTGAATGGCATTTTATTGGGCATCTGCAGAGCAACAAAGTTAAATCGCTTCTGGCTGGAGTTCCAAACCTGGCCATGGTTGAGGGTGTAGATAATGAGAAGCTTGCAAATCATCTCGATCGTGCAGTTTCAAACCTCAGGAGGGATCCATTGAAGGTTCTAGTCCAAGTAAACACGAGTGGAGAAATATCTAAATCTGGGGTTGAGCCTTCTGGATGCATCGAACTTGCAAAGCATGTGAAGTTGCGTTGCCCACATCTAGAATTTTCTGGCTTAATGACAATAGGGATGCCAGATTATACTAGCACTCCAGAGAACTTTAAGACGCTGCTGGAATGTAGAGCCGAAGTCTGTAGGGCACTTGAAATGGCAGAAGAGCAGTGTGAACTGTCAATGGGAATGTCTGGTGATTTCGAGTTGGCGATCGAAATGGGCAGCACCAATGTGAGAATTGGATCCACCATCTTCGGTCCGAGGGACTATGCAAAGAAGCAAGCTGATTAG MAAPLVEGAAAAALRSVMNRARQAAERSGRRFDQVRVVAVSKTKPVSLIRQVYDATHRCFGENYVQEIIDKAPQLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVEGVDNEKLANHLDRAVSNLRRDPLKVLVQVNTSGEISKSGVEPSGCIELAKHVKLRCPHLEFSGLMTIGMPDYTSTPENFKTLLECRAEVCRALEMAEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGPRDYAKKQAD Homology
BLAST of CmaCh16G009170 vs. ExPASy Swiss-Prot
Match: Q3T0G5 (Pyridoxal phosphate homeostasis protein OS=Bos taurus OX=9913 GN=PLPBP PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.5e-55 Identity = 126/241 (52.28%), Postives = 160/241 (66.39%), Query Frame = 0
BLAST of CmaCh16G009170 vs. ExPASy Swiss-Prot
Match: Q9Z2Y8 (Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.6e-55 Identity = 126/243 (51.85%), Postives = 163/243 (67.08%), Query Frame = 0
BLAST of CmaCh16G009170 vs. ExPASy Swiss-Prot
Match: O94903 (Pyridoxal phosphate homeostasis protein OS=Homo sapiens OX=9606 GN=PLPBP PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.3e-54 Identity = 126/250 (50.40%), Postives = 163/250 (65.20%), Query Frame = 0
BLAST of CmaCh16G009170 vs. ExPASy Swiss-Prot
Match: Q5R4Z1 (Pyridoxal phosphate homeostasis protein OS=Pongo abelii OX=9601 GN=PLPBP PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52 Identity = 122/249 (49.00%), Postives = 159/249 (63.86%), Query Frame = 0
BLAST of CmaCh16G009170 vs. ExPASy Swiss-Prot
Match: Q1ZXI6 (Pyridoxal phosphate homeostasis protein OS=Dictyostelium discoideum OX=44689 GN=prosc PE=3 SV=2) HSP 1 Score: 199.5 bits (506), Expect = 4.3e-50 Identity = 111/247 (44.94%), Postives = 157/247 (63.56%), Query Frame = 0
BLAST of CmaCh16G009170 vs. TAIR 10
Match: AT4G26860.1 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-109 Identity = 193/242 (79.75%), Postives = 216/242 (89.26%), Query Frame = 0
BLAST of CmaCh16G009170 vs. TAIR 10
Match: AT4G26860.2 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 383.6 bits (984), Expect = 1.2e-106 Identity = 193/252 (76.59%), Postives = 216/252 (85.71%), Query Frame = 0
BLAST of CmaCh16G009170 vs. TAIR 10
Match: AT1G11930.2 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 360.9 bits (925), Expect = 8.0e-100 Identity = 183/242 (75.62%), Postives = 204/242 (84.30%), Query Frame = 0
BLAST of CmaCh16G009170 vs. TAIR 10
Match: AT1G11930.1 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 355.9 bits (912), Expect = 2.6e-98 Identity = 183/244 (75.00%), Postives = 204/244 (83.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|