CmaCh16G001810.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G001810.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein S20
LocationCma_Chr16: 793823 .. 797338 (+)
Sequence length1212
RNA-Seq ExpressionCmaCh16G001810.1
SyntenyCmaCh16G001810.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATTACCTGAACACACAGAAAAAAAGCACCCAATGGCTAGCTGGTCTGCTGAGAACGCCACTGAAGCCTTCCTCAACACCCTCAAAATGGTAAGAACAAACAAAACCATAAACCCAATACGTTCCTTTCACCCCTTTCAGCTTAATTGAAATTAGTGATCTAATAATCTCGTTATGTTTCAGGGTCAGAAAGTGAACGAACCTGACGTTGCTGAGTTCATTTCAGCTATGGCTGCTGGAAACAACGCGCAGTTAATGGTTGTCGCATATGAAACATCCGCCGACCACAAGATTCTAGCACTTGCTGCGGCGGCCCGACAAACCGGCGGCCGAGTTATCTGTGTAATTCCACGGCAAGAAGATCTTCGTCTCTCACAAGAAATTCTCGGAGTTGAATCATATCACGGAATCGAGTTCGTCGTGGGAGAAGCTGAGAAGGTTATAAGAACCCATTACAGAGAAGTGGATTTTGTTTTGATCGACTGCAATCTGGACAGCCACGTGGCGGTGCTTGACGTCGTTAGATCAAGAAAGAATAACCAACGCGCCACCGTGGTAGTGGGTTTTAACGCGATGAGCAAAAGATCCGTTGGAGGGTGGTCCGGTGGATCGACAACGCATCTTTTGCCGATCGGGAAAGGGCTGATGGTGACGAAAGTTGGGGCGGAGGTATCAAAATCCGGCAGTGATGGGAGGAGGAGGAGGAGAAGCCAGTGGGTTGTGAAGGTGGATAAATGCACCGGCGAAGAACATGTCTTTAGGGTTAGGCTTCCACAGGGGAAAGTCATTCAAGCCTAAGTTTTTTTTTAATTTTAATTTCATAATCTCTGTTGGGAAGACGGAAAAAATGGAGTAATTTTTTCTTTTTTATTTTGAAGTCTTAGGGCTTATTGAGAGAATTAGTAAAATCCTTCAAATGTATATAGCAACGATGGGAGAAATTATATTAGAAGTTAATTTTTTTACTTTGGTTTCAATAATTATTTGACTTGACTTAATATGTTTGTAGAAAGTTTTGAATCTCTAAATTTATGGGGAAAGTCAATTTAATCTCTAAATTTTTAGGACAAAATAGATATAACTCGACAATAATATTCAAATAATTCCTATATATCTTCATTTGATTTATGCATAATTATTTTGCGAATTAATATCCACCTTTTAATATTTAGAATTTTAATTCAGCATCTAATAGTCTTAAGATTCTACTGCAACACAGTTATATTGCCTACTTGTTCTTCTAAGAATGAAAACTATTCCCATAAATTTAGGTATTTTCACCAATTTTGTTTTTACTCATATGCTTCTTATAAATTGAGGTAGCTCAATATAGAACTGTCTTAGATAAACATATTCAATTTTGAAATTCTCATCATTGAATCATTGAAAAGGAAGGTGAATATTGTTAGTATAAATATTGTTGGATGATGAAAGTCCCACATCGCCTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCTATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAACCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAAAGTCGTGTTCGTCTAACAAATATTAACTTTAATTATTTTAAACCTTTCTCAACTATTTATATCTTCACGATAGTGATGATTAGAGTTAGAGTGTGGTATTTTAAGGGAAGGAAGAGAGAATTTAAATACAAGCATTAAAGTACCCAGGTTGAAATTGAGAAGGATATCCTCCATTTGATACTCTCCCGTAATGACAATGTTCATCTTGGTTCCAATCCACCACTAAAAACACACAAAACAAAAGAAAAGGGCCCAAAACAAAACAAAAAAGGGCCCGAGTTTTGTGGGCCTCAATTACCGAACGATAGACCCGACCCGACCTGCACCAGCCCACTTTAAGAAAAACCCTAATTGTAAACATAATCGCCACAGAATCATATAAATTGCAACGCGGCACTCTCTCTCCATTTCTTCGGAGAGAGGCTGCTGGAAACTCAATCGTAGAGAGTTGCTGCTCAACCGCCGTCCCAGGTTTCTCTTTTGAATTTTGCTGTTTTTTTTTTTTTTGTTATTATCTATATTGCTTATTGTATTGTATAGTTCTTAAGACCATAACTTTTGCTTCATTATGATGAGACTTCTTAATGTGTACAAGTTATAAAACTAGGTTATCTATTTCACCTCTATTTTTGTTTTTGACTCCTGTGGTTGAGTTATTTTTGCCAATATTGAAAACATTGTTGTGTTCGTTCAACATATTCGTTTTGGACATTCAGGATTACCGGAAGTATGGCGTACGCAGCAATGAAACCGACTAAGGCAGGCTTAGAAGATACGCAAGAGCAAATTCATAAGATCAGGATTACGCTCTCCTCCAAAAATGTTAAGAATCTCGAAAAAGGTATATATATATATATATATATATATATATATATATATATATATTTTTTTTGTGTATTTTGGATTAGTTTTGTTGTTTTTTTTTTTATAAATTGTAATTAAGTTAATATGGCACTCAAATGAGATTGCATCTTTGTTTCTGTAGTTATCTGTTAACTTTGATGTGAAGTAAGTCGGATGTTACTTGTTAATTTTTTTTTTTTTTTTTTTTTGCAACGATCTGATTATTAGTTATAAGCGTTAACAAATTGTAGAGAGATATTATTGTTGGATAAAATGGATGTAGGATCCCTATTACGTGTTGACTGACGAACATTATCCTGGAACTGTCAAATAACTTCTTAGGATTGCAGTCTGTTTCGCCTGATGTTGTTGCATTGTCAAGTCCTCACTTTACTGACTTAAAAGTACGTAGTTAGCCTATCATGTAGTTGAGTTTTTCTTTTTCATAGTTGTTCCAATAGGCGCCTTTGGAAATTCGTTTGACATCATTTTGAATCAATAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGACCAGTAAGAATGCCCACTAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTGAAGGTACTTTGTTTTCCTATACCTATGATTTTCCGAACTAATCCAATGTGATATATCCATTCTAAAAATCATTGATACCTTAAATCCGAGTGTGATGTTGATTTCATCGTTAAATGCATCCCAATTCTTATTGAAATCATTCCTTCACTTGTTTTTTCATTGCAGGTACCAACACCTGGGACAGATTTGAGCTACGTGTCCACAAGCGAGTTATTGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGAATGCACTCTTTTCATGTTTTGCCTATTTTTAGTCTCATCAGCCAGTTGTTACTTTTTGAGTCTGGATCATACCTGTCAGGGTTTGTGGCGTTTTAAATGCAATAGTTCCCATTATATGTTGAAGCTAACGACATTGAGAGAGTTTTCTATTCCTGCCAAAATTTTCTTGCGTTAG

mRNA sequence

CAATTACCTGAACACACAGAAAAAAAGCACCCAATGGCTAGCTGGTCTGCTGAGAACGCCACTGAAGCCTTCCTCAACACCCTCAAAATGGGTCAGAAAGTGAACGAACCTGACGTTGCTGAGTTCATTTCAGCTATGGCTGCTGGAAACAACGCGCAGTTAATGGTTGTCGCATATGAAACATCCGCCGACCACAAGATTCTAGCACTTGCTGCGGCGGCCCGACAAACCGGCGGCCGAGTTATCTGTGTAATTCCACGGCAAGAAGATCTTCGTCTCTCACAAGAAATTCTCGGAGTTGAATCATATCACGGAATCGAGTTCGTCGTGGGAGAAGCTGAGAAGGTTATAAGAACCCATTACAGAGAAGTGGATTTTGTTTTGATCGACTGCAATCTGGACAGCCACGTGGCGGTGCTTGACGTCGTTAGATCAAGAAAGAATAACCAACGCGCCACCGTGGTAGTGGGTTTTAACGCGATGAGCAAAAGATCCGTTGGAGGGTGGTCCGGTGGATCGACAACGCATCTTTTGCCGATCGGGAAAGGGCTGATGGTGACGAAAGTTGGGGCGGAGGTATCAAAATCCGGCAGTGATGGGAGGAGGAGGAGGAGAAGCCAGTGGGTTGTGAAGGTGGATAAATGCACCGGCGAAGAACATGTCTTTAGGAGAGGCTGCTGGAAACTCAATCGTAGAGAGTTGCTGCTCAACCGCCGTCCCAGGATTACCGGAAGTATGGCGTACGCAGCAATGAAACCGACTAAGGCAGGCTTAGAAGATACGCAAGAGCAAATTCATAAGATCAGGATTACGCTCTCCTCCAAAAATGTTAAGAATCTCGAAAAAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGACCAGTAAGAATGCCCACTAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACCTGGGACAGATTTGAGCTACGTGTCCACAAGCGAGTTATTGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGTCTCATCAGCCAGTTGTTACTTTTTGAGTCTGGATCATACCTGTCAGGGTTTGTGGCGTTTTAAATGCAATAGTTCCCATTATATGTTGAAGCTAACGACATTGAGAGAGTTTTCTATTCCTGCCAAAATTTTCTTGCGTTAG

Coding sequence (CDS)

ATGGCTAGCTGGTCTGCTGAGAACGCCACTGAAGCCTTCCTCAACACCCTCAAAATGGGTCAGAAAGTGAACGAACCTGACGTTGCTGAGTTCATTTCAGCTATGGCTGCTGGAAACAACGCGCAGTTAATGGTTGTCGCATATGAAACATCCGCCGACCACAAGATTCTAGCACTTGCTGCGGCGGCCCGACAAACCGGCGGCCGAGTTATCTGTGTAATTCCACGGCAAGAAGATCTTCGTCTCTCACAAGAAATTCTCGGAGTTGAATCATATCACGGAATCGAGTTCGTCGTGGGAGAAGCTGAGAAGGTTATAAGAACCCATTACAGAGAAGTGGATTTTGTTTTGATCGACTGCAATCTGGACAGCCACGTGGCGGTGCTTGACGTCGTTAGATCAAGAAAGAATAACCAACGCGCCACCGTGGTAGTGGGTTTTAACGCGATGAGCAAAAGATCCGTTGGAGGGTGGTCCGGTGGATCGACAACGCATCTTTTGCCGATCGGGAAAGGGCTGATGGTGACGAAAGTTGGGGCGGAGGTATCAAAATCCGGCAGTGATGGGAGGAGGAGGAGGAGAAGCCAGTGGGTTGTGAAGGTGGATAAATGCACCGGCGAAGAACATGTCTTTAGGAGAGGCTGCTGGAAACTCAATCGTAGAGAGTTGCTGCTCAACCGCCGTCCCAGGATTACCGGAAGTATGGCGTACGCAGCAATGAAACCGACTAAGGCAGGCTTAGAAGATACGCAAGAGCAAATTCATAAGATCAGGATTACGCTCTCCTCCAAAAATGTTAAGAATCTCGAAAAAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGACCAGTAAGAATGCCCACTAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACCTGGGACAGATTTGAGCTACGTGTCCACAAGCGAGTTATTGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGTCTCATCAGCCAGTTGTTACTTTTTGAGTCTGGATCATACCTGTCAGGGTTTGTGGCGTTTTAAATGCAATAGTTCCCATTATATGTTGAAGCTAACGACATTGAGAGAGTTTTCTATTCCTGCCAAAATTTTCTTGCGTTAG

Protein sequence

MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALAAAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDCNLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGAEVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFRRGCWKLNRRELLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPVSSASCYFLSLDHTCQGLWRFKCNSSHYMLKLTTLREFSIPAKIFLR
Homology
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BLAST of CmaCh16G001810.1 vs. ExPASy Swiss-Prot
Match: Q9STY6 (40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.3e-51
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0 

Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy Swiss-Prot
Match: P49200 (40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 5.3e-50
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 236 AYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 295
           AY  MKP KAGLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 296 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 113

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy Swiss-Prot
Match: P35686 (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-45
Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 235 MAYA-AMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRM 294
           +AYA  MK  K G E +QE  H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRM
Sbjct: 6   VAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRM 65

Query: 295 PTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           PTKVLHITTRKSPCGEGTNTWDRFE+RVHKRVIDL SSADVVKQITSITIEP
Sbjct: 66  PTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEP 117

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy Swiss-Prot
Match: P23403 (40S ribosomal protein S20 OS=Xenopus laevis OX=8355 GN=rps20 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-36
Identity = 73/104 (70.19%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 242 PTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHIT 301
           P KA + D +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L IT
Sbjct: 6   PGKAPV-DQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRIT 65

Query: 302 TRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQITSI+IEP
Sbjct: 66  TRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEP 108

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy Swiss-Prot
Match: Q3ZBH8 (40S ribosomal protein S20 OS=Bos taurus OX=9913 GN=RPS20 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-36
Identity = 72/107 (67.29%), Postives = 91/107 (85.05%), Query Frame = 0 

Query: 239 AMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL 298
           A K T     + +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2   AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61

Query: 299 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
            ITTRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQITSI+IEP
Sbjct: 62  RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEP 108

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy TrEMBL
Match: A0A6J1J8E3 (uncharacterized protein LOC111483494 OS=Cucurbita maxima OX=3661 GN=LOC111483494 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 2.3e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 212

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy TrEMBL
Match: A0A6J1E9C9 (uncharacterized protein LOC111430589 OS=Cucurbita moschata OX=3662 GN=LOC111430589 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 6.8e-109
Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKN+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGL+VTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLLVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSG DG RRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGGDG-RRRRSQWVVKVDKCTGEEHVFR 211

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy TrEMBL
Match: A0A5D3DJF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00580 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.7e-89
Identity = 181/220 (82.27%), Postives = 194/220 (88.18%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNLDSHVAVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS G TTHLLPIGKG+MV
Sbjct: 121 CNLDSHVAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 TKVGAEVSKSGSDGRRRRR---SQWVVKVDKCTGEEHVFR 213
           T+VGAEVSK+G DGRR RR   SQWVVKVDKCTGEEHVFR
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRGQSQWVVKVDKCTGEEHVFR 220

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy TrEMBL
Match: A0A1S3AY08 (uncharacterized protein LOC103484000 OS=Cucumis melo OX=3656 GN=LOC103484000 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 4.6e-89
Identity = 180/220 (81.82%), Postives = 194/220 (88.18%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNLDSH AVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS G TTHLLPIGKG+MV
Sbjct: 121 CNLDSHAAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 TKVGAEVSKSGSDG---RRRRRSQWVVKVDKCTGEEHVFR 213
           T+VGAEVSK+G DG   RRRR+SQWVVKVDKCTGEEHVFR
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRRQSQWVVKVDKCTGEEHVFR 220

[Close]
BLAST of CmaCh16G001810.1 vs. ExPASy TrEMBL
Match: A0A0A0L8E9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G176350 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 4.3e-87
Identity = 177/220 (80.45%), Postives = 192/220 (87.27%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVL+D
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLMD 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNL  H+AVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS GSTTHLLPIG G+MV
Sbjct: 121 CNLGCHMAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGSTTHLLPIGMGVMV 180

Query: 181 TKVGAEVSKSGSDG---RRRRRSQWVVKVDKCTGEEHVFR 213
           TKVGAE SK+G DG   RRRR+SQWVVKVDKCTGEEHVFR
Sbjct: 181 TKVGAEESKAGEDGRRMRRRRQSQWVVKVDKCTGEEHVFR 220

[Close]
BLAST of CmaCh16G001810.1 vs. NCBI nr
Match: KAG6576788.1 (40S ribosomal protein S20-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655.6 bits (1690), Expect = 2.7e-184
Identity = 339/375 (90.40%), Postives = 343/375 (91.47%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSR N+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGL+VTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRNNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLLVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR---------------------------- 240
           EVSKSG DGRRRRRSQWVVKVDKCTGEEHVFR                            
Sbjct: 181 EVSKSGGDGRRRRRSQWVVKVDKCTGEEHVFRPTLRKTLIVNIIATESYKLQRRHSRSIS 240

Query: 241 --RGCWKLNRRELLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLE 300
             RGCWKLNRR+LLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLE
Sbjct: 241 SERGCWKLNRRDLLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLE 300

Query: 301 KVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFS 346
           KVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFS
Sbjct: 301 KVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFS 360

[Close]
BLAST of CmaCh16G001810.1 vs. NCBI nr
Match: XP_022985506.1 (uncharacterized protein LOC111483494 [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 4.7e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 212

[Close]
BLAST of CmaCh16G001810.1 vs. NCBI nr
Match: XP_023522325.1 (uncharacterized protein LOC111786241 [Cucurbita pepo subsp. pepo] >XP_023551838.1 uncharacterized protein LOC111809688 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-110
Identity = 208/212 (98.11%), Postives = 211/212 (99.53%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAE+VIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAERVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKN+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSG DGRRRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGGDGRRRRRSQWVVKVDKCTGEEHVFR 212

[Close]
BLAST of CmaCh16G001810.1 vs. NCBI nr
Match: XP_022922645.1 (uncharacterized protein LOC111430589 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 1.4e-108
Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKN+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGL+VTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLLVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSG DG RRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGGDG-RRRRSQWVVKVDKCTGEEHVFR 211

[Close]
BLAST of CmaCh16G001810.1 vs. NCBI nr
Match: KAA0067688.1 (uncharacterized protein E6C27_scaffold70G00580 [Cucumis melo var. makuwa] >TYK23692.1 uncharacterized protein E5676_scaffold577G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 5.6e-89
Identity = 181/220 (82.27%), Postives = 194/220 (88.18%), Query Frame = 0 

Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNLDSHVAVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS G TTHLLPIGKG+MV
Sbjct: 121 CNLDSHVAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 TKVGAEVSKSGSDGRRRRR---SQWVVKVDKCTGEEHVFR 213
           T+VGAEVSK+G DGRR RR   SQWVVKVDKCTGEEHVFR
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRGQSQWVVKVDKCTGEEHVFR 220

[Close]
BLAST of CmaCh16G001810.1 vs. TAIR 10
Match: AT3G47370.2 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-52
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0 

Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]
BLAST of CmaCh16G001810.1 vs. TAIR 10
Match: AT3G47370.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-52
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0 

Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]
BLAST of CmaCh16G001810.1 vs. TAIR 10
Match: AT3G47370.3 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-52
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0 

Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]
BLAST of CmaCh16G001810.1 vs. TAIR 10
Match: AT3G45030.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-51
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 236 AYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 295
           AY  MKP KAGLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 296 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 113

[Close]
BLAST of CmaCh16G001810.1 vs. TAIR 10
Match: AT5G62300.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-51
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 236 AYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 295
           AY  MKP KAGLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 296 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 113

The following BLAST results are available for this feature:
BLAST of CmaCh16G001810.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STY66.3e-5191.8940S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1[more]
P492005.3e-5090.9140S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2[more]
P356863.9e-4583.0440S ribosomal protein S20 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2... [more]
P234032.0e-3670.1940S ribosomal protein S20 OS=Xenopus laevis OX=8355 GN=rps20 PE=1 SV=1[more]
Q3ZBH83.3e-3667.2940S ribosomal protein S20 OS=Bos taurus OX=9913 GN=RPS20 PE=3 SV=1[more]
BLAST of CmaCh16G001810.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J8E32.3e-112100.00uncharacterized protein LOC111483494 OS=Cucurbita maxima OX=3661 GN=LOC111483494... [more]
A0A6J1E9C96.8e-10997.64uncharacterized protein LOC111430589 OS=Cucurbita moschata OX=3662 GN=LOC1114305... [more]
A0A5D3DJF32.7e-8982.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AY084.6e-8981.82uncharacterized protein LOC103484000 OS=Cucumis melo OX=3656 GN=LOC103484000 PE=... [more]
A0A0A0L8E94.3e-8780.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G176350 PE=4 SV=1[more]
BLAST of CmaCh16G001810.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6576788.12.7e-18490.4040S ribosomal protein S20-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022985506.14.7e-112100.00uncharacterized protein LOC111483494 [Cucurbita maxima][more]
XP_023522325.11.5e-11098.11uncharacterized protein LOC111786241 [Cucurbita pepo subsp. pepo] >XP_023551838.... [more]
XP_022922645.11.4e-10897.64uncharacterized protein LOC111430589 [Cucurbita moschata][more]
KAA0067688.15.6e-8982.27uncharacterized protein E6C27_scaffold70G00580 [Cucumis melo var. makuwa] >TYK23... [more]
BLAST of CmaCh16G001810.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G47370.24.5e-5291.89Ribosomal protein S10p/S20e family protein [more]
AT3G47370.14.5e-5291.89Ribosomal protein S10p/S20e family protein [more]
AT3G47370.34.5e-5291.89Ribosomal protein S10p/S20e family protein [more]
AT3G45030.13.8e-5190.91Ribosomal protein S10p/S20e family protein [more]
AT5G62300.13.8e-5190.91Ribosomal protein S10p/S20e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 256..269
score: 44.51
coord: 313..327
score: 52.69
coord: 291..306
score: 42.43
IPR001848Ribosomal protein S10HAMAPMF_00508Ribosomal_S10coord: 254..353
score: 15.758031
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 258..347
e-value: 2.2E-31
score: 120.3
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 258..340
e-value: 7.1E-24
score: 83.9
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 4..181
e-value: 5.7E-8
score: 34.3
NoneNo IPR availablePANTHERPTHR33593:SF3BNAA09G06020D PROTEINcoord: 1..215
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600Ribosomal protein S10 domaincoord: 241..348
e-value: 3.8E-42
score: 145.0
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 256..343
IPR005729Ribosomal protein S10, eukaryotic/archaealTIGRFAMTIGR01046TIGR01046coord: 255..345
e-value: 4.1E-36
score: 121.3
IPR009902Protein of unknown function DUF1442PFAMPF07279DUF1442coord: 4..213
e-value: 3.4E-30
score: 105.0
IPR009902Protein of unknown function DUF1442PANTHERPTHR33593DUF1442 FAMILY PROTEINcoord: 1..215
IPR018268Ribosomal protein S10, conserved sitePROSITEPS00361RIBOSOMAL_S10coord: 280..295

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh16G001810CmaCh16G001810gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G001810.1:exon:518CmaCh16G001810.1:exon:518exon
CmaCh16G001810.1:exon:519CmaCh16G001810.1:exon:519exon
CmaCh16G001810.1:exon:520CmaCh16G001810.1:exon:520exon
CmaCh16G001810.1:exon:521CmaCh16G001810.1:exon:521exon
CmaCh16G001810.1:exon:522CmaCh16G001810.1:exon:522exon
CmaCh16G001810.1:exon:523CmaCh16G001810.1:exon:523exon
CmaCh16G001810.1:exon:524CmaCh16G001810.1:exon:524exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G001810.1:five_prime_utrCmaCh16G001810.1:five_prime_utrfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G001810.1:cdsCmaCh16G001810.1:cdsCDS
CmaCh16G001810.1:cdsCmaCh16G001810.1:cds_2CDS
CmaCh16G001810.1:cdsCmaCh16G001810.1:cds_3CDS
CmaCh16G001810.1:cdsCmaCh16G001810.1:cds_4CDS
CmaCh16G001810.1:cdsCmaCh16G001810.1:cds_5CDS
CmaCh16G001810.1:cdsCmaCh16G001810.1:cds_6CDS
CmaCh16G001810.1:cdsCmaCh16G001810.1:cds_7CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh16G001810.1CmaCh16G001810.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005829 cytosol
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome