CmaCh16G001810 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G001810
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	40S ribosomal protein S20
Location	Cma_Chr16: 793823 .. 797338 (+)
RNA-Seq Expression	CmaCh16G001810
Synteny	CmaCh16G001810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTACCTGAACACACAGAAAAAAAGCACCCAATGGCTAGCTGGTCTGCTGAGAACGCCACTGAAGCCTTCCTCAACACCCTCAAAATGGTAAGAACAAACAAAACCATAAACCCAATACGTTCCTTTCACCCCTTTCAGCTTAATTGAAATTAGTGATCTAATAATCTCGTTATGTTTCAGGGTCAGAAAGTGAACGAACCTGACGTTGCTGAGTTCATTTCAGCTATGGCTGCTGGAAACAACGCGCAGTTAATGGTTGTCGCATATGAAACATCCGCCGACCACAAGATTCTAGCACTTGCTGCGGCGGCCCGACAAACCGGCGGCCGAGTTATCTGTGTAATTCCACGGCAAGAAGATCTTCGTCTCTCACAAGAAATTCTCGGAGTTGAATCATATCACGGAATCGAGTTCGTCGTGGGAGAAGCTGAGAAGGTTATAAGAACCCATTACAGAGAAGTGGATTTTGTTTTGATCGACTGCAATCTGGACAGCCACGTGGCGGTGCTTGACGTCGTTAGATCAAGAAAGAATAACCAACGCGCCACCGTGGTAGTGGGTTTTAACGCGATGAGCAAAAGATCCGTTGGAGGGTGGTCCGGTGGATCGACAACGCATCTTTTGCCGATCGGGAAAGGGCTGATGGTGACGAAAGTTGGGGCGGAGGTATCAAAATCCGGCAGTGATGGGAGGAGGAGGAGGAGAAGCCAGTGGGTTGTGAAGGTGGATAAATGCACCGGCGAAGAACATGTCTTTAGGGTTAGGCTTCCACAGGGGAAAGTCATTCAAGCCTAAGTTTTTTTTTAATTTTAATTTCATAATCTCTGTTGGGAAGACGGAAAAAATGGAGTAATTTTTTCTTTTTTATTTTGAAGTCTTAGGGCTTATTGAGAGAATTAGTAAAATCCTTCAAATGTATATAGCAACGATGGGAGAAATTATATTAGAAGTTAATTTTTTTACTTTGGTTTCAATAATTATTTGACTTGACTTAATATGTTTGTAGAAAGTTTTGAATCTCTAAATTTATGGGGAAAGTCAATTTAATCTCTAAATTTTTAGGACAAAATAGATATAACTCGACAATAATATTCAAATAATTCCTATATATCTTCATTTGATTTATGCATAATTATTTTGCGAATTAATATCCACCTTTTAATATTTAGAATTTTAATTCAGCATCTAATAGTCTTAAGATTCTACTGCAACACAGTTATATTGCCTACTTGTTCTTCTAAGAATGAAAACTATTCCCATAAATTTAGGTATTTTCACCAATTTTGTTTTTACTCATATGCTTCTTATAAATTGAGGTAGCTCAATATAGAACTGTCTTAGATAAACATATTCAATTTTGAAATTCTCATCATTGAATCATTGAAAAGGAAGGTGAATATTGTTAGTATAAATATTGTTGGATGATGAAAGTCCCACATCGCCTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCTATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAACCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAAAGTCGTGTTCGTCTAACAAATATTAACTTTAATTATTTTAAACCTTTCTCAACTATTTATATCTTCACGATAGTGATGATTAGAGTTAGAGTGTGGTATTTTAAGGGAAGGAAGAGAGAATTTAAATACAAGCATTAAAGTACCCAGGTTGAAATTGAGAAGGATATCCTCCATTTGATACTCTCCCGTAATGACAATGTTCATCTTGGTTCCAATCCACCACTAAAAACACACAAAACAAAAGAAAAGGGCCCAAAACAAAACAAAAAAGGGCCCGAGTTTTGTGGGCCTCAATTACCGAACGATAGACCCGACCCGACCTGCACCAGCCCACTTTAAGAAAAACCCTAATTGTAAACATAATCGCCACAGAATCATATAAATTGCAACGCGGCACTCTCTCTCCATTTCTTCGGAGAGAGGCTGCTGGAAACTCAATCGTAGAGAGTTGCTGCTCAACCGCCGTCCCAGGTTTCTCTTTTGAATTTTGCTGTTTTTTTTTTTTTTGTTATTATCTATATTGCTTATTGTATTGTATAGTTCTTAAGACCATAACTTTTGCTTCATTATGATGAGACTTCTTAATGTGTACAAGTTATAAAACTAGGTTATCTATTTCACCTCTATTTTTGTTTTTGACTCCTGTGGTTGAGTTATTTTTGCCAATATTGAAAACATTGTTGTGTTCGTTCAACATATTCGTTTTGGACATTCAGGATTACCGGAAGTATGGCGTACGCAGCAATGAAACCGACTAAGGCAGGCTTAGAAGATACGCAAGAGCAAATTCATAAGATCAGGATTACGCTCTCCTCCAAAAATGTTAAGAATCTCGAAAAAGGTATATATATATATATATATATATATATATATATATATATATATTTTTTTTGTGTATTTTGGATTAGTTTTGTTGTTTTTTTTTTTATAAATTGTAATTAAGTTAATATGGCACTCAAATGAGATTGCATCTTTGTTTCTGTAGTTATCTGTTAACTTTGATGTGAAGTAAGTCGGATGTTACTTGTTAATTTTTTTTTTTTTTTTTTTTTGCAACGATCTGATTATTAGTTATAAGCGTTAACAAATTGTAGAGAGATATTATTGTTGGATAAAATGGATGTAGGATCCCTATTACGTGTTGACTGACGAACATTATCCTGGAACTGTCAAATAACTTCTTAGGATTGCAGTCTGTTTCGCCTGATGTTGTTGCATTGTCAAGTCCTCACTTTACTGACTTAAAAGTACGTAGTTAGCCTATCATGTAGTTGAGTTTTTCTTTTTCATAGTTGTTCCAATAGGCGCCTTTGGAAATTCGTTTGACATCATTTTGAATCAATAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGACCAGTAAGAATGCCCACTAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTGAAGGTACTTTGTTTTCCTATACCTATGATTTTCCGAACTAATCCAATGTGATATATCCATTCTAAAAATCATTGATACCTTAAATCCGAGTGTGATGTTGATTTCATCGTTAAATGCATCCCAATTCTTATTGAAATCATTCCTTCACTTGTTTTTTCATTGCAGGTACCAACACCTGGGACAGATTTGAGCTACGTGTCCACAAGCGAGTTATTGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGAATGCACTCTTTTCATGTTTTGCCTATTTTTAGTCTCATCAGCCAGTTGTTACTTTTTGAGTCTGGATCATACCTGTCAGGGTTTGTGGCGTTTTAAATGCAATAGTTCCCATTATATGTTGAAGCTAACGACATTGAGAGAGTTTTCTATTCCTGCCAAAATTTTCTTGCGTTAG

mRNA sequence

CAATTACCTGAACACACAGAAAAAAAGCACCCAATGGCTAGCTGGTCTGCTGAGAACGCCACTGAAGCCTTCCTCAACACCCTCAAAATGGGTCAGAAAGTGAACGAACCTGACGTTGCTGAGTTCATTTCAGCTATGGCTGCTGGAAACAACGCGCAGTTAATGGTTGTCGCATATGAAACATCCGCCGACCACAAGATTCTAGCACTTGCTGCGGCGGCCCGACAAACCGGCGGCCGAGTTATCTGTGTAATTCCACGGCAAGAAGATCTTCGTCTCTCACAAGAAATTCTCGGAGTTGAATCATATCACGGAATCGAGTTCGTCGTGGGAGAAGCTGAGAAGGTTATAAGAACCCATTACAGAGAAGTGGATTTTGTTTTGATCGACTGCAATCTGGACAGCCACGTGGCGGTGCTTGACGTCGTTAGATCAAGAAAGAATAACCAACGCGCCACCGTGGTAGTGGGTTTTAACGCGATGAGCAAAAGATCCGTTGGAGGGTGGTCCGGTGGATCGACAACGCATCTTTTGCCGATCGGGAAAGGGCTGATGGTGACGAAAGTTGGGGCGGAGGTATCAAAATCCGGCAGTGATGGGAGGAGGAGGAGGAGAAGCCAGTGGGTTGTGAAGGTGGATAAATGCACCGGCGAAGAACATGTCTTTAGGAGAGGCTGCTGGAAACTCAATCGTAGAGAGTTGCTGCTCAACCGCCGTCCCAGGATTACCGGAAGTATGGCGTACGCAGCAATGAAACCGACTAAGGCAGGCTTAGAAGATACGCAAGAGCAAATTCATAAGATCAGGATTACGCTCTCCTCCAAAAATGTTAAGAATCTCGAAAAAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGACCAGTAAGAATGCCCACTAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACCTGGGACAGATTTGAGCTACGTGTCCACAAGCGAGTTATTGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGTCTCATCAGCCAGTTGTTACTTTTTGAGTCTGGATCATACCTGTCAGGGTTTGTGGCGTTTTAAATGCAATAGTTCCCATTATATGTTGAAGCTAACGACATTGAGAGAGTTTTCTATTCCTGCCAAAATTTTCTTGCGTTAG

Coding sequence (CDS)

ATGGCTAGCTGGTCTGCTGAGAACGCCACTGAAGCCTTCCTCAACACCCTCAAAATGGGTCAGAAAGTGAACGAACCTGACGTTGCTGAGTTCATTTCAGCTATGGCTGCTGGAAACAACGCGCAGTTAATGGTTGTCGCATATGAAACATCCGCCGACCACAAGATTCTAGCACTTGCTGCGGCGGCCCGACAAACCGGCGGCCGAGTTATCTGTGTAATTCCACGGCAAGAAGATCTTCGTCTCTCACAAGAAATTCTCGGAGTTGAATCATATCACGGAATCGAGTTCGTCGTGGGAGAAGCTGAGAAGGTTATAAGAACCCATTACAGAGAAGTGGATTTTGTTTTGATCGACTGCAATCTGGACAGCCACGTGGCGGTGCTTGACGTCGTTAGATCAAGAAAGAATAACCAACGCGCCACCGTGGTAGTGGGTTTTAACGCGATGAGCAAAAGATCCGTTGGAGGGTGGTCCGGTGGATCGACAACGCATCTTTTGCCGATCGGGAAAGGGCTGATGGTGACGAAAGTTGGGGCGGAGGTATCAAAATCCGGCAGTGATGGGAGGAGGAGGAGGAGAAGCCAGTGGGTTGTGAAGGTGGATAAATGCACCGGCGAAGAACATGTCTTTAGGAGAGGCTGCTGGAAACTCAATCGTAGAGAGTTGCTGCTCAACCGCCGTCCCAGGATTACCGGAAGTATGGCGTACGCAGCAATGAAACCGACTAAGGCAGGCTTAGAAGATACGCAAGAGCAAATTCATAAGATCAGGATTACGCTCTCCTCCAAAAATGTTAAGAATCTCGAAAAAGTTTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAAGGACCAGTAAGAATGCCCACTAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACCTGGGACAGATTTGAGCTACGTGTCCACAAGCGAGTTATTGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGTCTCATCAGCCAGTTGTTACTTTTTGAGTCTGGATCATACCTGTCAGGGTTTGTGGCGTTTTAAATGCAATAGTTCCCATTATATGTTGAAGCTAACGACATTGAGAGAGTTTTCTATTCCTGCCAAAATTTTCTTGCGTTAG

Protein sequence

MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALAAAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDCNLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGAEVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFRRGCWKLNRRELLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPVSSASCYFLSLDHTCQGLWRFKCNSSHYMLKLTTLREFSIPAKIFLR

Homology

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BLAST of CmaCh16G001810 vs. ExPASy Swiss-Prot
Match: Q9STY6 (40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.3e-51
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

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BLAST of CmaCh16G001810 vs. ExPASy Swiss-Prot
Match: P49200 (40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 5.3e-50
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 236 AYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 295
           AY  MKP KAGLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 296 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 113

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BLAST of CmaCh16G001810 vs. ExPASy Swiss-Prot
Match: P35686 (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-45
Identity = 93/112 (83.04%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 235 MAYA-AMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRM 294
           +AYA  MK  K G E +QE  H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRM
Sbjct: 6   VAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRM 65

Query: 295 PTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           PTKVLHITTRKSPCGEGTNTWDRFE+RVHKRVIDL SSADVVKQITSITIEP
Sbjct: 66  PTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEP 117

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BLAST of CmaCh16G001810 vs. ExPASy Swiss-Prot
Match: P23403 (40S ribosomal protein S20 OS=Xenopus laevis OX=8355 GN=rps20 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-36
Identity = 73/104 (70.19%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 242 PTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHIT 301
           P KA + D +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L IT
Sbjct: 6   PGKAPV-DQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRIT 65

Query: 302 TRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQITSI+IEP
Sbjct: 66  TRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEP 108

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BLAST of CmaCh16G001810 vs. ExPASy Swiss-Prot
Match: Q3ZBH8 (40S ribosomal protein S20 OS=Bos taurus OX=9913 GN=RPS20 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-36
Identity = 72/107 (67.29%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 239 AMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL 298
           A K T     + +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L
Sbjct: 2   AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTL 61

Query: 299 HITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
            ITTRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQITSI+IEP
Sbjct: 62  RITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEP 108

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BLAST of CmaCh16G001810 vs. ExPASy TrEMBL
Match: A0A6J1J8E3 (uncharacterized protein LOC111483494 OS=Cucurbita maxima OX=3661 GN=LOC111483494 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 2.3e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 212

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BLAST of CmaCh16G001810 vs. ExPASy TrEMBL
Match: A0A6J1E9C9 (uncharacterized protein LOC111430589 OS=Cucurbita moschata OX=3662 GN=LOC111430589 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 6.8e-109
Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKN+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGL+VTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLLVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSG DG RRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGGDG-RRRRSQWVVKVDKCTGEEHVFR 211

[Close]

BLAST of CmaCh16G001810 vs. ExPASy TrEMBL
Match: A0A5D3DJF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00580 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.7e-89
Identity = 181/220 (82.27%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNLDSHVAVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS G TTHLLPIGKG+MV
Sbjct: 121 CNLDSHVAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 TKVGAEVSKSGSDGRRRRR---SQWVVKVDKCTGEEHVFR 213
           T+VGAEVSK+G DGRR RR   SQWVVKVDKCTGEEHVFR
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRGQSQWVVKVDKCTGEEHVFR 220

[Close]

BLAST of CmaCh16G001810 vs. ExPASy TrEMBL
Match: A0A1S3AY08 (uncharacterized protein LOC103484000 OS=Cucumis melo OX=3656 GN=LOC103484000 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 4.6e-89
Identity = 180/220 (81.82%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNLDSH AVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS G TTHLLPIGKG+MV
Sbjct: 121 CNLDSHAAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 TKVGAEVSKSGSDG---RRRRRSQWVVKVDKCTGEEHVFR 213
           T+VGAEVSK+G DG   RRRR+SQWVVKVDKCTGEEHVFR
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRRQSQWVVKVDKCTGEEHVFR 220

[Close]

BLAST of CmaCh16G001810 vs. ExPASy TrEMBL
Match: A0A0A0L8E9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G176350 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 4.3e-87
Identity = 177/220 (80.45%), Postives = 192/220 (87.27%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVL+D
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLMD 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNL  H+AVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS GSTTHLLPIG G+MV
Sbjct: 121 CNLGCHMAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGSTTHLLPIGMGVMV 180

Query: 181 TKVGAEVSKSGSDG---RRRRRSQWVVKVDKCTGEEHVFR 213
           TKVGAE SK+G DG   RRRR+SQWVVKVDKCTGEEHVFR
Sbjct: 181 TKVGAEESKAGEDGRRMRRRRQSQWVVKVDKCTGEEHVFR 220

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BLAST of CmaCh16G001810 vs. NCBI nr
Match: KAG6576788.1 (40S ribosomal protein S20-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655.6 bits (1690), Expect = 2.7e-184
Identity = 339/375 (90.40%), Postives = 343/375 (91.47%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSR N+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGL+VTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRNNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLLVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR---------------------------- 240
           EVSKSG DGRRRRRSQWVVKVDKCTGEEHVFR                            
Sbjct: 181 EVSKSGGDGRRRRRSQWVVKVDKCTGEEHVFRPTLRKTLIVNIIATESYKLQRRHSRSIS 240

Query: 241 --RGCWKLNRRELLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLE 300
             RGCWKLNRR+LLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLE
Sbjct: 241 SERGCWKLNRRDLLLNRRPRITGSMAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLE 300

Query: 301 KVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFS 346
           KVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFS
Sbjct: 301 KVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFS 360

[Close]

BLAST of CmaCh16G001810 vs. NCBI nr
Match: XP_022985506.1 (uncharacterized protein LOC111483494 [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 4.7e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 212

[Close]

BLAST of CmaCh16G001810 vs. NCBI nr
Match: XP_023522325.1 (uncharacterized protein LOC111786241 [Cucurbita pepo subsp. pepo] >XP_023551838.1 uncharacterized protein LOC111809688 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-110
Identity = 208/212 (98.11%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAE+VIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAERVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKN+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSG DGRRRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGGDGRRRRRSQWVVKVDKCTGEEHVFR 212

[Close]

BLAST of CmaCh16G001810 vs. NCBI nr
Match: XP_022922645.1 (uncharacterized protein LOC111430589 [Cucurbita moschata])

HSP 1 Score: 404.1 bits (1037), Expect = 1.4e-108
Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120
           AAARQTGGRV+CVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC
Sbjct: 61  AAARQTGGRVVCVIPRQEDLRLSQEILGVESYHGIEFVVGEAEKVIRTHYREVDFVLIDC 120

Query: 121 NLDSHVAVLDVVRSRKNNQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLMVTKVGA 180
           NLDSHVAVLDVVRSRKN+QRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGL+VTKVGA
Sbjct: 121 NLDSHVAVLDVVRSRKNSQRATVVVGFNAMSKRSVGGWSGGSTTHLLPIGKGLLVTKVGA 180

Query: 181 EVSKSGSDGRRRRRSQWVVKVDKCTGEEHVFR 213
           EVSKSG DG RRRRSQWVVKVDKCTGEEHVFR
Sbjct: 181 EVSKSGGDG-RRRRSQWVVKVDKCTGEEHVFR 211

[Close]

BLAST of CmaCh16G001810 vs. NCBI nr
Match: KAA0067688.1 (uncharacterized protein E6C27_scaffold70G00580 [Cucumis melo var. makuwa] >TYK23692.1 uncharacterized protein E5676_scaffold577G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 5.6e-89
Identity = 181/220 (82.27%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MASWSAENATEAFLNTLKMGQKVNEPDVAEFISAMAAGNNAQLMVVAYETSADHKILALA 60
           MASWSAENATEAFLNTLKMGQK NEPDV EFISAMAAGNNAQLMVVAYE SADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAARQTGGRVICVIPRQEDLRLSQEILGVESY-HGIEFVVGEAEKVIRTHYREVDFVLID 120
           AAA QTGGRV+C+I RQEDL +SQ ILG+ S+ HGIEFVVGEAEK+I+T Y EVDFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVLDVVRS-RKNNQRATVVVGFNAMSKRSVG---GWSGGSTTHLLPIGKGLMV 180
           CNLDSHVAVL+ VRS RKN+Q AT+VVGFNAMSKR  G   GWS G TTHLLPIGKG+MV
Sbjct: 121 CNLDSHVAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 TKVGAEVSKSGSDGRRRRR---SQWVVKVDKCTGEEHVFR 213
           T+VGAEVSK+G DGRR RR   SQWVVKVDKCTGEEHVFR
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRGQSQWVVKVDKCTGEEHVFR 220

[Close]

BLAST of CmaCh16G001810 vs. TAIR 10
Match: AT3G47370.2 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-52
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]

BLAST of CmaCh16G001810 vs. TAIR 10
Match: AT3G47370.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-52
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]

BLAST of CmaCh16G001810 vs. TAIR 10
Match: AT3G47370.3 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-52
Identity = 102/111 (91.89%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 235 MAYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 294
           MAY  MKPTKAGLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMP 60

Query: 295 TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           TKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 61  TKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 111

[Close]

BLAST of CmaCh16G001810 vs. TAIR 10
Match: AT3G45030.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-51
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 236 AYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 295
           AY  MKP KAGLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 296 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 113

[Close]

BLAST of CmaCh16G001810 vs. TAIR 10
Match: AT5G62300.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-51
Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 236 AYAAMKPTKAGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPT 295
           AY  MKP KAGLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPT
Sbjct: 4   AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPT 63

Query: 296 KVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP 346
           KVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEP
Sbjct: 64  KVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEP 113

The following BLAST results are available for this feature:

BLAST of CmaCh16G001810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STY6	6.3e-51	91.89	40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1	[more]
P49200	5.3e-50	90.91	40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2	[more]
P35686	3.9e-45	83.04	40S ribosomal protein S20 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2...	[more]
P23403	2.0e-36	70.19	40S ribosomal protein S20 OS=Xenopus laevis OX=8355 GN=rps20 PE=1 SV=1	[more]
Q3ZBH8	3.3e-36	67.29	40S ribosomal protein S20 OS=Bos taurus OX=9913 GN=RPS20 PE=3 SV=1	[more]

BLAST of CmaCh16G001810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8E3	2.3e-112	100.00	uncharacterized protein LOC111483494 OS=Cucurbita maxima OX=3661 GN=LOC111483494...	[more]
A0A6J1E9C9	6.8e-109	97.64	uncharacterized protein LOC111430589 OS=Cucurbita moschata OX=3662 GN=LOC1114305...	[more]
A0A5D3DJF3	2.7e-89	82.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AY08	4.6e-89	81.82	uncharacterized protein LOC103484000 OS=Cucumis melo OX=3656 GN=LOC103484000 PE=...	[more]
A0A0A0L8E9	4.3e-87	80.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G176350 PE=4 SV=1	[more]

BLAST of CmaCh16G001810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576788.1	2.7e-184	90.40	40S ribosomal protein S20-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022985506.1	4.7e-112	100.00	uncharacterized protein LOC111483494 [Cucurbita maxima]	[more]
XP_023522325.1	1.5e-110	98.11	uncharacterized protein LOC111786241 [Cucurbita pepo subsp. pepo] >XP_023551838....	[more]
XP_022922645.1	1.4e-108	97.64	uncharacterized protein LOC111430589 [Cucurbita moschata]	[more]
KAA0067688.1	5.6e-89	82.27	uncharacterized protein E6C27_scaffold70G00580 [Cucumis melo var. makuwa] >TYK23...	[more]

BLAST of CmaCh16G001810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47370.2	4.5e-52	91.89	Ribosomal protein S10p/S20e family protein	[more]
AT3G47370.1	4.5e-52	91.89	Ribosomal protein S10p/S20e family protein	[more]
AT3G47370.3	4.5e-52	91.89	Ribosomal protein S10p/S20e family protein	[more]
AT3G45030.1	3.8e-51	90.91	Ribosomal protein S10p/S20e family protein	[more]
AT5G62300.1	3.8e-51	90.91	Ribosomal protein S10p/S20e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001848	Ribosomal protein S10	PRINTS	PR00971	RIBOSOMALS10	coord: 256..269 score: 44.51 coord: 313..327 score: 52.69 coord: 291..306 score: 42.43
IPR001848	Ribosomal protein S10	HAMAP	MF_00508	Ribosomal_S10	coord: 254..353 score: 15.758031
IPR027486	Ribosomal protein S10 domain	SMART	SM01403	Ribosomal_S10_2	coord: 258..347 e-value: 2.2E-31 score: 120.3
IPR027486	Ribosomal protein S10 domain	PFAM	PF00338	Ribosomal_S10	coord: 258..340 e-value: 7.1E-24 score: 83.9
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 4..181 e-value: 5.7E-8 score: 34.3
None	No IPR available	PANTHER	PTHR33593:SF3	BNAA09G06020D PROTEIN	coord: 1..215
IPR036838	Ribosomal protein S10 domain superfamily	GENE3D	3.30.70.600	Ribosomal protein S10 domain	coord: 241..348 e-value: 3.8E-42 score: 145.0
IPR036838	Ribosomal protein S10 domain superfamily	SUPERFAMILY	54999	Ribosomal protein S10	coord: 256..343
IPR005729	Ribosomal protein S10, eukaryotic/archaeal	TIGRFAM	TIGR01046	TIGR01046	coord: 255..345 e-value: 4.1E-36 score: 121.3
IPR009902	Protein of unknown function DUF1442	PFAM	PF07279	DUF1442	coord: 4..213 e-value: 3.4E-30 score: 105.0
IPR009902	Protein of unknown function DUF1442	PANTHER	PTHR33593	DUF1442 FAMILY PROTEIN	coord: 1..215
IPR018268	Ribosomal protein S10, conserved site	PROSITE	PS00361	RIBOSOMAL_S10	coord: 280..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G001810.1	CmaCh16G001810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome