CmaCh16G000140.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G000140.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 .
Location	Cma_Chr16: 85013 .. 85784 (-)
Sequence length	592
RNA-Seq Expression	CmaCh16G000140.1
Synteny	CmaCh16G000140.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGAGCGAAGAAGCAAAGACGTTTGAATTCAAAGAGCAACAGAATGCAAAAAGAAGAAGACAATGAGCCCCTCCGACCCATTTTGTGCGTCAAAAACATAAACAAATTGGATTTGAAGCGTTTCGACGCGATGGACAAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAGACGCTCTCTCACTCTGACTCTGACTCTGACGTCTCGCTGGTGGCTGAAAAGGGTCAGGTAAGCCCACCAAAACCCCTCCTCCCATGTCCGGTCACCACCATTGCTCTCATAACACATATCCTATCCTTCATTTGGACTGTGATGGCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAAATCTCCCTTCCCCACAACGCCCCATCAGACTTACTGTGAGATGGTAATTTCCATTCCTTCTGTTAAACTGGAATTGGAATGGTCGCTTTTGTAAATTTGAAATTGATAAGGTAGCTGCATGATTCTGTGCAGTGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACATTGTCATGCCGATCAATTATGGAAACGGGAAAGGCGATCCAACTCAAACAACAACCACACGCCTCCTCCGTTTCTGTAGCTTTAGCGTTTCTTCTTCTACATTTTCATCAACAATATTTTGTCGTACCGCCAATCCCTCATTTCGAGGGGGTTTTTTTCTAACTTATTTTTATCAATATCACTGGTCCCCTCACAACTTCTATGACACC

mRNA sequence

ATGAAGGGAGCGAAGAAGCAAAGACGTTTGAATTCAAAGAGCAACAGAATGCAAAAAGAAGAAGACAATGAGCCCCTCCGACCCATTTTGTGCGTCAAAAACATAAACAAATTGGATTTGAAGCGTTTCGACGCGATGGACAAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAGACGCTCTCTCACTCTGACTCTGACTCTGACGTCTCGCTGGTGGCTGAAAAGGGTCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAAATCTCCCTTCCCCACAACGCCCCATCAGACTTACTGTGAGATGTGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACATTGTCATGCCGATCAATTATGGAAACGGGAAAGGCGATCCAACTCAAACAACAACCACACGCCTCCTCCGTTTCTGTAGCTTTAGCGTTTCTTCTTCTACATTTTCATCAACAATATTTTGTCGTACCGCCAATCCCTCATTTCGAGGGGGTTTTTTTCTAACTTATTTTTATCAATATCACTGGTCCCCTCACAACTTCTATGACACC

Coding sequence (CDS)

ATGAAGGGAGCGAAGAAGCAAAGACGTTTGAATTCAAAGAGCAACAGAATGCAAAAAGAAGAAGACAATGAGCCCCTCCGACCCATTTTGTGCGTCAAAAACATAAACAAATTGGATTTGAAGCGTTTCGACGCGATGGACAAGTGTTACCTCTTGGACTTCGACCCATTCCATTCCCTCAATCAGACGCTCTCTCACTCTGACTCTGACTCTGACGTCTCGCTGGTGGCTGAAAAGGGTCAGGTGGCCTGTAGAGACTATCCGCACGCCAGGTATTTGTGTCTCAAATCTCCCTTCCCCACAACGCCCCATCAGACTTACTGTGAGATGTGCTATTGTTACGTCTGCGATGCCATAGCTCCATGCGACCACTGGACGTCACATTGTCATGCCGATCAATTATGGAAACGGGAAAGGCGATCCAACTCAAACAACAACCACACGCCTCCTCCGTTTCTGTAG

Protein sequence

MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIAPCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL

Homology

[Close]

BLAST of CmaCh16G000140.1 vs. ExPASy TrEMBL
Match: A0A6J1J202 (uncharacterized protein LOC111482692 OS=Cucurbita maxima OX=3661 GN=LOC111482692 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.1e-86
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60
           MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL
Sbjct: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60

Query: 61  NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA 120
           NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA
Sbjct: 61  NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA 120

Query: 121 PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 154
           PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL
Sbjct: 121 PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 153

[Close]

BLAST of CmaCh16G000140.1 vs. ExPASy TrEMBL
Match: A0A6J1E9A2 (uncharacterized protein LOC111430566 OS=Cucurbita moschata OX=3662 GN=LOC111430566 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.2e-78
Identity = 142/155 (91.61%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60
           MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSL
Sbjct: 1   MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSL 60

Query: 61  NQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDA 120
           NQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCLK PFPTTPHQTYCEMCYCYVCDA
Sbjct: 61  NQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDA 120

Query: 121 IAPCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 154
           IAPCDHWTSHCHADQ  KRERRSNS+NNHTPPP L
Sbjct: 121 IAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL 155

[Close]

BLAST of CmaCh16G000140.1 vs. ExPASy TrEMBL
Match: A0A6J1CH43 (uncharacterized protein LOC111011466 OS=Momordica charantia OX=3673 GN=LOC111011466 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.9e-41
Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MKGAK-KQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHS 60
           M G+K K R     + RMQ  E + PLR ILCVKN+  +DLKRFD  + CY+LDFDPFHS
Sbjct: 1   MSGSKVKGREREMINGRMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHS 60

Query: 61  LNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAI 120
            + ++S  D+DS++S+V EKGQVACRDYPHARYLC+K PF TTPHQ+ C MC+CYVCD+ 
Sbjct: 61  PDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR 120

Query: 121 APCDHWTSHC---HADQLWKRERRSNSNNNHTP 150
           APCDHW+ HC   H + LW+  R   +NN + P
Sbjct: 121 APCDHWSFHCSASHTNPLWEYSRHYYNNNINMP 150

[Close]

BLAST of CmaCh16G000140.1 vs. ExPASy TrEMBL
Match: A0A6J5WUR1 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18098 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35
Identity = 79/150 (52.67%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 3   GAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSLN- 62
           G KK++R+  +++    EED  P+R ILCVK  NK+D+K+F+ +D C++LDFDPF  +  
Sbjct: 88  GQKKKKRVTPRTSSSSLEEDGSPIRHILCVK--NKVDVKQFEEVDDCFILDFDPFEPIQL 147

Query: 63  QTLSHSD--------SDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYC 122
             LS SD           DV++VAEKGQVACRDYPH+R+LCLK PF TTPH++YCE+CYC
Sbjct: 148 SKLSVSDKFAGHNAPESPDVAVVAEKGQVACRDYPHSRHLCLKFPFETTPHESYCELCYC 207

Query: 123 YVCDAIAPCDHW-TSHCHADQL---WKRER 140
           YVCD+ APC  W  +HCHA +    WK  R
Sbjct: 208 YVCDSAAPCGLWKLAHCHASEHIGDWKSRR 235

[Close]

BLAST of CmaCh16G000140.1 vs. ExPASy TrEMBL
Match: A0A6P5RWJ6 (uncharacterized protein LOC110749625 OS=Prunus avium OX=42229 GN=LOC110749625 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 3   GAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSLN- 62
           G KK++R+  +++    EED  P+R ILCVK  NK+D+K+F+ +D C++LDFDPF  +  
Sbjct: 18  GQKKKKRVTPRTSSSSLEEDGSPIRHILCVK--NKVDVKQFEEVDDCFILDFDPFEPIQL 77

Query: 63  QTLSHSDS----------DSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMC 122
             LS SD+            DV++VAEKGQVACRDYPH+R+LCLK PF TTPH++YCE+C
Sbjct: 78  SKLSVSDNFAGDNVDAPESPDVAVVAEKGQVACRDYPHSRHLCLKFPFETTPHESYCELC 137

Query: 123 YCYVCDAIAPCDHWT-SHCHADQL---WKRER 140
           YCYVCD+ APC  W  +HCHA +    WK  R
Sbjct: 138 YCYVCDSAAPCGLWNLAHCHASEHIGDWKSRR 167

[Close]

BLAST of CmaCh16G000140.1 vs. NCBI nr
Match: XP_022984372.1 (uncharacterized protein LOC111482692 [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 2.3e-86
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60
           MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL
Sbjct: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60

Query: 61  NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA 120
           NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA
Sbjct: 61  NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA 120

Query: 121 PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 154
           PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL
Sbjct: 121 PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 153

[Close]

BLAST of CmaCh16G000140.1 vs. NCBI nr
Match: KAG6576620.1 (hypothetical protein SDJN03_24194, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014672.1 hypothetical protein SDJN02_22301 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.1 bits (775), Expect = 1.3e-78
Identity = 141/153 (92.16%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60
           MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSL
Sbjct: 1   MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSL 60

Query: 61  NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIA 120
           NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCL  PFPTTPHQTYCEMCYCYVCDAIA
Sbjct: 61  NQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLNFPFPTTPHQTYCEMCYCYVCDAIA 120

Query: 121 PCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 154
           PCDHWTSHCHADQ  KRERRSNSNNNH PPP L
Sbjct: 121 PCDHWTSHCHADQFSKRERRSNSNNNHKPPPLL 153

[Close]

BLAST of CmaCh16G000140.1 vs. NCBI nr
Match: XP_023552151.1 (uncharacterized protein LOC111809913 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 1.7e-78
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60
           MKGAKK+RRLNSKS RMQKEED+EPLRPILCVKN NKLDLKRFDA ++CYLLDF+PFHSL
Sbjct: 1   MKGAKKRRRLNSKSKRMQKEEDDEPLRPILCVKNTNKLDLKRFDATEECYLLDFNPFHSL 60

Query: 61  NQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDA 120
           NQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCLK PFPTTPHQTYCEMCYCYVCDA
Sbjct: 61  NQTLSHTDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDA 120

Query: 121 IAPCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 154
           IAPCDHWTSHCHADQ WKRERRSNSNNNHTPPP L
Sbjct: 121 IAPCDHWTSHCHADQFWKRERRSNSNNNHTPPPLL 155

[Close]

BLAST of CmaCh16G000140.1 vs. NCBI nr
Match: XP_022922610.1 (uncharacterized protein LOC111430566 [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 8.6e-78
Identity = 142/155 (91.61%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MKGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSL 60
           MKGAKK+RRLNSKS RMQKEED+EPLRP+LCVKNINKLDLKRFDAM++CYLLDFDPFHSL
Sbjct: 1   MKGAKKRRRLNSKSKRMQKEEDDEPLRPMLCVKNINKLDLKRFDAMEECYLLDFDPFHSL 60

Query: 61  NQTLSH--SDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDA 120
           NQTLSH  SDSDSDVSLVAEKGQVACRDYPHARYLCLK PFPTTPHQTYCEMCYCYVCDA
Sbjct: 61  NQTLSHSDSDSDSDVSLVAEKGQVACRDYPHARYLCLKFPFPTTPHQTYCEMCYCYVCDA 120

Query: 121 IAPCDHWTSHCHADQLWKRERRSNSNNNHTPPPFL 154
           IAPCDHWTSHCHADQ  KRERRSNS+NNHTPPP L
Sbjct: 121 IAPCDHWTSHCHADQFSKRERRSNSDNNHTPPPLL 155

[Close]

BLAST of CmaCh16G000140.1 vs. NCBI nr
Match: XP_022140919.1 (uncharacterized protein LOC111011466 [Momordica charantia])

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-40
Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 1   MKGAK-KQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHS 60
           M G+K K R     + RMQ  E + PLR ILCVKN+  +DLKRFD  + CY+LDFDPFHS
Sbjct: 1   MSGSKVKGREREMINGRMQVGEHHSPLRSILCVKNV--VDLKRFDEREDCYVLDFDPFHS 60

Query: 61  LNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAI 120
            + ++S  D+DS++S+V EKGQVACRDYPHARYLC+K PF TTPHQ+ C MC+CYVCD+ 
Sbjct: 61  PDPSIS-KDTDSELSIVGEKGQVACRDYPHARYLCVKFPFDTTPHQSCCTMCFCYVCDSR 120

Query: 121 APCDHWTSHC---HADQLWKRERRSNSNNNHTP 150
           APCDHW+ HC   H + LW+  R   +NN + P
Sbjct: 121 APCDHWSFHCSASHTNPLWEYSRHYYNNNINMP 150

[Close]

BLAST of CmaCh16G000140.1 vs. TAIR 10
Match: AT4G27660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 9.3e-30
Identity = 67/150 (44.67%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 2   KGAKKQRRLNSKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSLN 61
           K   K +R    S   ++EE+  PLR I C+K   + D+K F+  + C++LDFDP  S +
Sbjct: 19  KKKTKSKRRKRLSKEEEEEEEGTPLRGIFCLK--TRQDMKIFEEKEDCFILDFDPNDSFD 78

Query: 62  -QTLSH---SDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCD 121
            + LS    S+ D DV++V EKGQVACRD+PH R+LCLK PF ++ H ++C  CYCYVCD
Sbjct: 79  ARKLSDSPASECDDDVAIVHEKGQVACRDFPHPRHLCLKFPFESSQHSSHCNQCYCYVCD 138

Query: 122 AIAPCDHWTS-----HCHA--DQLWKRERR 141
            +APC +WT+     HC A  +  WK  R+
Sbjct: 139 VVAPCAYWTASFATPHCEALENSKWKPIRK 166

[Close]

BLAST of CmaCh16G000140.1 vs. TAIR 10
Match: AT5G54150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 6.0e-29
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 12  SKSNRMQKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSLNQTLSHSDSDS 71
           +++ +   EE+  PLR ILCVK   + D+KRF+  + C++LDF+PF S +        D 
Sbjct: 21  ARTTKPSLEEEGSPLRGILCVK--TRRDMKRFEKTEDCFILDFNPFDSFDVKRLSFSLDK 80

Query: 72  DVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIAPCDHW-TSHCH 131
           D+ ++ E GQVACRDYPH R+LCL  PF +T + T+C++CYC+VCD  APC  W +SHC+
Sbjct: 81  DLEIIHESGQVACRDYPHPRHLCLNFPFGSTSNATHCDLCYCHVCDKPAPCALWMSSHCN 139

[Close]

BLAST of CmaCh16G000140.1 vs. TAIR 10
Match: AT4G28690.1 (BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT2G20310.1); Has 455 Blast hits to 438 proteins in 127 species: Archae - 0; Bacteria - 18; Metazoa - 148; Fungi - 91; Plants - 136; Viruses - 3; Other Eukaryotes - 59 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 44  DAMDKCYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTP 103
           D  D C +LDFDP  +  +T+  +     V +V +KG+VACRD+PH R+ C K PF +T 
Sbjct: 54  DDDDDCVILDFDP--TAKETVIETCETDGVLVVGQKGEVACRDFPHPRHACAKYPFKSTL 113

Query: 104 HQTYCEMCYCYVCDAIAPCDHW-------TSHCHA---DQLWKRERRSNSNNNHTPPP 152
           HQT+CEMC+CYVCD  APC +W       T HCHA   ++ W  +R      N  P P
Sbjct: 114 HQTFCEMCHCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQRECIRTGNMLPRP 169

[Close]

BLAST of CmaCh16G000140.1 vs. TAIR 10
Match: AT2G20310.1 (RPM1 interacting protein 13 )

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 47  DKCYLLDFDPFHSLNQTLSHSDSDSDVSLVAEKGQVACRDYPHARYLCLKSPFPTTPHQT 106
           D C +LD DP  +   T    D D DV +V +KG++ACRD+PH R+ C K  F +T H+ 
Sbjct: 76  DDCVILDCDPDKTRETTSVDDDDDDDVLVVGQKGEIACRDFPHPRHSCAKYAFNSTSHEK 135

Query: 107 YCEMCYCYVCDAIAPCDHW------TSHCHA---DQLWKRER 140
           YC+MC+CYVCD  APC +W        HCHA   +++WK +R
Sbjct: 136 YCDMCHCYVCDIRAPCPYWCIAVSSIDHCHANDKEKIWKNQR 177

[Close]

BLAST of CmaCh16G000140.1 vs. TAIR 10
Match: AT5G54148.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 104 Blast hits to 102 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 18  QKEEDNEPLRPILCVKNINKLDLKRFDAMDKCYLLDFDPFHSLN-QTLSHSDSDSDVSLV 77
           +KEED+ PL  I C+K   + D+KRF+  + C++LDFDPF S + + L+ +D   DV   
Sbjct: 3   KKEEDDTPLVGIFCLK--TRQDMKRFEETEDCFILDFDPFDSFDVKKLTFTD---DVR-- 62

Query: 78  AEKGQVACRDYPHARYLCLKSPFPTTPHQTYCEMCYCYVCDAIAPCDHW---TSHCHA-- 136
                    DYPH R+ CL  PF +TP+ ++C++CYCYVCD  APC  W   TSHC+A  
Sbjct: 63  --------EDYPHPRHFCLNFPFGSTPNSSHCDLCYCYVCDKPAPCAEWTISTSHCNAYD 111

The following BLAST results are available for this feature:

BLAST of CmaCh16G000140.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh16G000140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J202	1.1e-86	100.00	uncharacterized protein LOC111482692 OS=Cucurbita maxima OX=3661 GN=LOC111482692...	[more]
A0A6J1E9A2	4.2e-78	91.61	uncharacterized protein LOC111430566 OS=Cucurbita moschata OX=3662 GN=LOC1114305...	[more]
A0A6J1CH43	6.9e-41	57.52	uncharacterized protein LOC111011466 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J5WUR1	2.6e-35	52.67	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18098 PE=4 S...	[more]
A0A6P5RWJ6	2.6e-35	51.97	uncharacterized protein LOC110749625 OS=Prunus avium OX=42229 GN=LOC110749625 PE...	[more]

BLAST of CmaCh16G000140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984372.1	2.3e-86	100.00	uncharacterized protein LOC111482692 [Cucurbita maxima]	[more]
KAG6576620.1	1.3e-78	92.16	hypothetical protein SDJN03_24194, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023552151.1	1.7e-78	91.61	uncharacterized protein LOC111809913 [Cucurbita pepo subsp. pepo]	[more]
XP_022922610.1	8.6e-78	91.61	uncharacterized protein LOC111430566 [Cucurbita moschata]	[more]
XP_022140919.1	1.4e-40	57.52	uncharacterized protein LOC111011466 [Momordica charantia]	[more]

BLAST of CmaCh16G000140.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27660.1	9.3e-30	44.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G54150.1	6.0e-29	47.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28690.1	5.8e-24	44.07	BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT...	[more]
AT2G20310.1	2.2e-23	45.10	RPM1 interacting protein 13	[more]
AT5G54148.1	1.9e-22	44.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR33443	ZGC:112980	coord: 12..151

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh16G000140	CmaCh16G000140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000140.1:exon:649	CmaCh16G000140.1:exon:649	exon
CmaCh16G000140.1:exon:648	CmaCh16G000140.1:exon:648	exon
CmaCh16G000140.1:exon:647	CmaCh16G000140.1:exon:647	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000140.1:three_prime_utr	CmaCh16G000140.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000140.1:cds	CmaCh16G000140.1:cds_3	CDS
CmaCh16G000140.1:cds	CmaCh16G000140.1:cds_2	CDS
CmaCh16G000140.1:cds	CmaCh16G000140.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh16G000140.1	CmaCh16G000140.1-protein	polypeptide