CmaCh14G007500.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G007500.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	C2H2-like zinc finger protein
Location	Cma_Chr14: 3735700 .. 3736188 (+)
Sequence length	489
RNA-Seq Expression	CmaCh14G007500.1
Synteny	CmaCh14G007500.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACCCAGCCATTTACGACTTCCTCACCCAAACAACAACCGCTTCAAATTCTGCACCCAAAGCTTCGAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTTTCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAATTCTTCATCTCGGTTCGCTTCCGCCGCAGCCGACGACGACGACGATGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCAGCTCCTACTCCGACTCCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACAACCACCGCCTCGGCCTCGGCCTCGCCGGATGCTCTCTCTCCGAACGTCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

mRNA sequence

ATGGCGGACCCAGCCATTTACGACTTCCTCACCCAAACAACAACCGCTTCAAATTCTGCACCCAAAGCTTCGAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTTTCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAATTCTTCATCTCGGTTCGCTTCCGCCGCAGCCGACGACGACGACGATGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCAGCTCCTACTCCGACTCCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACAACCACCGCCTCGGCCTCGGCCTCGCCGGATGCTCTCTCTCCGAACGTCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

Coding sequence (CDS)

ATGGCGGACCCAGCCATTTACGACTTCCTCACCCAAACAACAACCGCTTCAAATTCTGCACCCAAAGCTTCGAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTTTCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAATTCTTCATCTCGGTTCGCTTCCGCCGCAGCCGACGACGACGACGATGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCAGCTCCTACTCCGACTCCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACAACCACCGCCTCGGCCTCGGCCTCGCCGGATGCTCTCTCTCCGAACGTCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

Protein sequence

MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL

Homology

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.0e-12
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 4  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER 63
          P+   F+    T S S+ + S    +  +S R+FPC YCPRKFYTSQALGGHQNAHKRER
Sbjct: 6  PSYLHFVGPAKTRS-SSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 65

Query: 64 AASRK 69
          AA+R+
Sbjct: 66 AAARR 69

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 22  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILH 81
           K + K     SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A     F +    
Sbjct: 20  KEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDF 79

Query: 82  LGSLPPQPTTTTMTHHHL-----PQPYTVAPAPTPTP 109
           L +LP     ++ + HHL     P   +VA  PT  P
Sbjct: 80  LHTLP--VFLSSPSQHHLTILGYPASASVACFPTVHP 114

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 32  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPQPTTTTMTH 91
           ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +          H
Sbjct: 54  ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA-----MHMGRM--------FGH 108

Query: 92  HHLPQPYT 100
           HH P  YT
Sbjct: 114 HHRPYTYT 108

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 10  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 69
           L  ++T+ +S P+  ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Sbjct: 59  LPLSSTSESSNPEQQQQ-QQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA 117

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 10  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 69
           L  +   S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++ 
Sbjct: 41  LIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG 100

Query: 70  FASEILHLGSLP 82
              + + L SLP
Sbjct: 101 QYYK-MTLSSLP 111

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.9e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFN 120
           RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFN
Sbjct: 61  RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFN 120

Query: 121 QNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           QNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL
Sbjct: 121 QNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 155/165 (93.94%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSL-PPQPTTTTMTHHHLPQPYTVAPA--PTPTPAPADFLGQH 120
           RERAASRKAFASEILHLGSL PP P TTT THHHLPQPYTVAP+  PTPTPAPADFLGQH
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPADFLGQH 120

Query: 121 WFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           WFNQNHYSANTTTT +ASASASPDALSPN DTAVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 121/168 (72.02%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60
           MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH
Sbjct: 1   MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  KRERAASRKAFASEILHLGSL----PPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLG 120
           KRERAASRK F SEILHLGSL    PP P  T  T+HHL  P   A AP+          
Sbjct: 61  KRERAASRKVFTSEILHLGSLQHSRPPPPPPT--TYHHLASPSATALAPSA------LFD 120

Query: 121 QHWFNQ-NHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           +HWF+Q NHY     TTTTASASASP+ LSPN D AVEHVTIDLTLRL
Sbjct: 121 EHWFHQNNHYRG---TTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48
Identity = 119/167 (71.26%), Postives = 127/167 (76.05%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60
           MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH
Sbjct: 1   MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  KRERAASRKAFASEILHLGSL----PPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLG 120
           KRERAASRKAF SEILHLGSL    PP P  T  T+HHL  P T A AP+          
Sbjct: 61  KRERAASRKAFTSEILHLGSLQHSRPPPPPPT--TYHHLASPSTTALAPSA------LFD 120

Query: 121 QHWFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           +HWF+QN++   TTTT    ASASP+ LSPN D AVEHVTIDLTLRL
Sbjct: 121 EHWFHQNNHYRGTTTT----ASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CmaCh14G007500.1 vs. ExPASy TrEMBL
Match: A0A6J1DQT0 (zinc finger protein 6 OS=Momordica charantia OX=3673 GN=LOC111023386 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 104/164 (63.41%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFL+QTTT     PK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTT----DPKPSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHW-- 120
           RERAASRK F S++LH    PP        HH L  P    P+ +P  A A FL +HW  
Sbjct: 61  RERAASRKPFHSDLLH---FPP--------HHILNSPPPPPPSASPAMA-ASFLDEHWQL 120

Query: 121 FNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
            +QNH+ A       +SAS   DALSPN D AVE+VTIDLTLRL
Sbjct: 121 GHQNHHRA-----ALSSASTPEDALSPNAD-AVENVTIDLTLRL 142

[Close]

BLAST of CmaCh14G007500.1 vs. NCBI nr
Match: XP_022983390.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFN 120
           RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFN
Sbjct: 61  RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQHWFN 120

Query: 121 QNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           QNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL
Sbjct: 121 QNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CmaCh14G007500.1 vs. NCBI nr
Match: XP_022934585.1 (protein LATE FLOWERING-like [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 7.0e-78
Identity = 155/165 (93.94%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSL-PPQPTTTTMTHHHLPQPYTVAPA--PTPTPAPADFLGQH 120
           RERAASRKAFASEILHLGSL PP P TTT THHHLPQPYTVAP+  PTPTPAPADFLGQH
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPADFLGQH 120

Query: 121 WFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           WFNQNHYSANTTTT +ASASASPDALSPN DTAVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CmaCh14G007500.1 vs. NCBI nr
Match: KAG7017856.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 159/175 (90.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSLPPQP----TTTTMTHHHLPQPYTVAPAPTP------TPAP 120
           RERAASRKAFASEILHLGSLPP P    TTTT THHHLPQPYTVAPAPTP      TPAP
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYTVAPAPTPIPTPTTTPAP 120

Query: 121 ADFLGQHWFNQNHYSANTTTTTT---ASASASPDALSPNVDTAVEHVTIDLTLRL 163
           ADFLGQHWFNQNHYSANTTTTTT   ASASASPDALSPN DTAVEHVTIDLTLRL
Sbjct: 121 ADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL 175

[Close]

BLAST of CmaCh14G007500.1 vs. NCBI nr
Match: KAG6581122.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.7 bits (761), Expect = 5.9e-77
Identity = 159/180 (88.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSLPPQP----TTTTMTHHHLPQPYTVAPAPTP------TPAP 120
           RERAASRKAFASEILHLGSLPP P    TTTT THHHLPQPYTVAPAPTP      TPAP
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPPTTTTTTTHHHLPQPYTVAPAPTPIPTPTTTPAP 120

Query: 121 ADFLGQHWFNQNHYSANTTTTTT--------ASASASPDALSPNVDTAVEHVTIDLTLRL 163
           ADFLGQHWFNQNHYSANTTTTTT        ASASASPDALSPN DTAVEHVTIDLTLRL
Sbjct: 121 ADFLGQHWFNQNHYSANTTTTTTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL 180

[Close]

BLAST of CmaCh14G007500.1 vs. NCBI nr
Match: XP_023529006.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 151/170 (88.82%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLTQTTTASNSA KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSATKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFASEILHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTP------TPAPADFL 120
           RERAASRKAFASEILHLGSLPP P   T  HHHLPQPYTV PAPTP      TPAPADFL
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPPTTAHHHLPQPYTVVPAPTPTPTPTTTPAPADFL 120

Query: 121 GQHWFNQNHYSAN--TTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 163
           GQHWFNQNHYSAN  TTTTTT +ASASPDALSPN DTAVEHVTIDLTLRL
Sbjct: 121 GQHWFNQNHYSANTTTTTTTTTTASASPDALSPNADTAVEHVTIDLTLRL 170

[Close]

BLAST of CmaCh14G007500.1 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-13
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 4  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER 63
          P+   F+    T S S+ + S    +  +S R+FPC YCPRKFYTSQALGGHQNAHKRER
Sbjct: 6  PSYLHFVGPAKTRS-SSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 65

Query: 64 AASRK 69
          AA+R+
Sbjct: 66 AAARR 69

[Close]

BLAST of CmaCh14G007500.1 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 32  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPQPTTTTMTH 91
           ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +          H
Sbjct: 54  ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA-----MHMGRM--------FGH 108

Query: 92  HHLPQPYT 100
           HH P  YT
Sbjct: 114 HHRPYTYT 108

[Close]

BLAST of CmaCh14G007500.1 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 22  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILH 81
           K + K     SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A     F +    
Sbjct: 20  KEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDF 79

Query: 82  LGSLPPQPTTTTMTHHHL-----PQPYTVAPAPTPTP 109
           L +LP     ++ + HHL     P   +VA  PT  P
Sbjct: 80  LHTLP--VFLSSPSQHHLTILGYPASASVACFPTVHP 114

[Close]

BLAST of CmaCh14G007500.1 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 10  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 69
           L  ++T+ +S P+  ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Sbjct: 59  LPLSSTSESSNPEQQQQ-QQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA 117

[Close]

BLAST of CmaCh14G007500.1 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 10  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 69
           L  +   S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++ 
Sbjct: 41  LIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG 100

Query: 70  FASEILHLGSLP 82
              + + L SLP
Sbjct: 101 QYYK-MTLSSLP 111

The following BLAST results are available for this feature:

BLAST of CmaCh14G007500.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX4	9.0e-12	56.92	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q9FKA9	4.9e-10	45.36	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39266	4.9e-10	48.53	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39263	5.5e-09	51.67	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	1.2e-08	45.83	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]

BLAST of CmaCh14G007500.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J5R2	4.9e-85	100.00	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=...	[more]
A0A6J1F843	3.4e-78	93.94	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S...	[more]
A0A6J1JQI7	1.3e-48	72.02	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=...	[more]
A0A6J1EJQ6	1.6e-48	71.26	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S...	[more]
A0A6J1DQT0	1.3e-37	63.41	zinc finger protein 6 OS=Momordica charantia OX=3673 GN=LOC111023386 PE=4 SV=1	[more]

BLAST of CmaCh14G007500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983390.1	1.0e-84	100.00	protein LATE FLOWERING-like [Cucurbita maxima]	[more]
XP_022934585.1	7.0e-78	93.94	protein LATE FLOWERING-like [Cucurbita moschata]	[more]
KAG7017856.1	1.6e-77	90.86	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6581122.1	5.9e-77	88.33	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023529006.1	1.6e-74	88.82	protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh14G007500.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14010.1	6.4e-13	56.92	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G24625.1	3.5e-11	48.53	zinc finger protein 7	[more]
AT5G48890.1	3.5e-11	45.36	C2H2-like zinc finger protein	[more]
AT1G66140.1	3.9e-10	51.67	zinc finger protein 4	[more]
AT1G80730.1	8.7e-10	45.83	zinc-finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 15..77 e-value: 1.8E-5 score: 26.5
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 15..162
None	No IPR available	PANTHER	PTHR45730:SF28	OS02G0182300 PROTEIN	coord: 15..162
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 39..59
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 37..64 score: 10.595541
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 34..64

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G007500	CmaCh14G007500	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G007500.1:exon:459	CmaCh14G007500.1:exon:459	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G007500.1:cds	CmaCh14G007500.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G007500.1	CmaCh14G007500.1-protein	polypeptide