CmaCh12G008560.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G008560.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	TOM1-like protein 1
Location	Cma_Chr12: 6332446 .. 6337610 (-)
Sequence length	1414
RNA-Seq Expression	CmaCh12G008560.1
Synteny	CmaCh12G008560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGACAATTTGATGGATAAAGTTAGTGCCTTGGGTGAACGCCTAAAGATTAGTGGGACAGAGATGAGCCGGAAGATGAGTGCAGGTGTCAGTTCTATGAGTTTCAAAATGAAGGAACTCTTTCAAGGTCCTAACCAGGACGATAAACTTGTTGAAGATGCCACATCAGAGACACTGGAAGAGCCGGATTGGGCCCTGAATCTTGAAATCTGTGACATGGTTAATTCTGAAAAAATCAACAGCATAGACTTGATTCGTGGGATTAAAAAACGAATAATGGTAAAAAGCCCCAGGATCCAGTATTTGGCATTGGTGCTGCTTGAGACGTGTGTTAAAAATTGTGAGAAGTGTTTCTCCGAGGTGGCAGCGGAGAGAGTTCTTGATGAGATGGTGAAGCTAATTGATGATCCGCAAACTGTTGTCAATAATCGGAACAAAGCTTTAATGTTGATTGAAGCATGGGGGGAATCAACTGGTGAACTTCGTTATTTGCCTGTTTATGAAGAAACGTACAAGGTATCCACATATTTCAGTACTCTCTTTCTTTGCTAAATATCTGGAATTCGGTTATGAAAAATATATAGGGCCATGGCATAATCTAAGTGGATTTATTAGTTCTGAAGGACATTTTTTTTTCTCCTTTCTTTCTTCTTAAAAGAAAACTTCCATCAATTGGCGTTGAAATTTTCTAAGTTTACTCATGGAATGATAGATACTAAGCATATATTTACTGTCACAATATTGTTTAAGAAACTTGAGTCAAATTGTGGTAACTTGGCAACAAACTATGTTTAACGCTTGGACATAAGAAGTATGCGGGACAAGCTTATCTTGGGAGGAACGGCTTGATTTAATTAAAAGGGAAGTAGCTTCATGGTGTGTTCTTTCCATATGCTTTTATAATTACTCTCATGCTGATGTATGCTTGTTGTATTTCCTTCAAATGTATTTCAGATTGAGTAGGGACGGTTTTAGTGTTAGTATTAAGGTTGGTCTGATTTTGTCTGGATTTGAATTTCTTTTGTTTTTGGGTACAGATGAAGTATGTAGGACAGTAGAAAAGATTGCATTATGCTATGAACTTATTATATAGAAAGCTTATAGACTGTTTCCAAAGCAACCATAATTAAATAAATTGAAATGGGAAACTGAGAATTGTGTGTAAATTTTTATTCAACAATTCTAAATTGTCAGGGTTTCTAATCTCATGCTCCAGTATGGAGTCCAGTCCCCAAAACAATATTTTTTTGAAGAGTGGAATTCCCTAAAGAACAGTATTCCAAAAACAGGATTTTTGTTCCAAAAGGAGGTTTGAAATTATTAATATATGAAATCATTTTTTTTTTCATCTGGTTATCCCCTTGAATGAATAGATATGGCAACCAGTTCTTTGTTGTGTATCAGCAATGGAGGGTATTTTAGCATATGTCATCTTAATTGACTTGAAGTGGTTTGACTGACTGCACAAATAGGATTCTCGTAATTCGTAAAAAAAAGTTGTGCACGTGGAGTGGTTTGGCTACTGCACAAACCAGGAAGCTAGTACTTCTTAACTCTACTTTTGAGGGAAGTCCATAGAGTAGTGTTGAGGGGGATCTTGCAAAATATATAAAGCTTCTAGAACTTTTTTGTAACTATTCTCCAAATGCAATTTTTCTTAGTTGGAGGCTTTCTTGTAAATCCTTCATTTGGTTGAGTTGCTCAAGTATAACAATCATTTGAACGTAAAATTCTAGGTTAAAAGTGTCGTTAATTTCTTGAAGTATAAATATTTGTTTTGGTAGATCAAATGGTGAAGCTAAGTTTAAAGGCAGTGCCTCTTCTTGTGTACAATGTGCGCAATATTGTTTAGGGCAGATAATGAGAACATGATATCTATGGTCTTCTATAAGATCTGGAACTTGAAGTCTAACCATATCCCAGTAAGGGATTTGAGGTAAATGCCGTGAAAATTTTCACAGCACCTTTTATTGGCAACCTTTAGATAGATCAAATTGATTTATGATGTTTTTTATACAAATGCTTGCCGTTCTTTGCTGAGAAGCGTAGGATAGAAGGTGCTGAATGGTTTGTAAAGCTCAATCTACTCTTATACACCATCAAGGAGCAAGCCTTAGATCTTAGTATATGTGGGTCCATCTTTGGAGGAATTCTTTACAAATTCACCCAGTTGCACCCGATGAAGAAACGCTCACTCCCTTGTTCAAGTGGCAACATCCACATCAGTCTCCTTTGCTTTAGAAAAATCCCTCTCCCAGGTGGACCAAGGTGACATGAACATGTGGCCTTCCTCTTTGATATCAAATACCAGTTATAAATGAGACGATCCCTGGATCCTAATAAATAAATAAACAAAAGTTGATATCATTCAATCCATCCCCTAAAATGAAACCCCTGAAGAAAGTGGCAAGCCTGATCCATTACAAGATGTAAGACACCTGCAATTCGCAAAGAACTCTCTTGCCTTCAAACGAACCTTCCTCATCATAAACTCCAAAAATAAGCCTCTTTCCTTTTAAGCATACCCATCAGACATAACTCCATTGATTCACTATAATTCGTGTTTTTAGTCCTTTGAAGTGGATTACTAAGTGCAAGAACTTGATTGTGTCCTTTTCACTACTGCTGATTTGTAAGCTTATCTCGTCAAATTGCATGTAGTTGCCCCGCAAACAGGAAAGCACCAACTGTAACTTATGTTGGACAGATTGAGCTTACAGTTTTTGGCTTGGGCAATCCTTGGTCTCGTGTTAGGAAAATCTTTTATGTTATTTGTTATCCCTTAGTTATGGCGCATTGACGGATACTGGATAAGGCAACCCATTGCTCTGTTTGACGTGTTGTACTGTGAATCAGGTTTTTAATGATCTGTTTTTGAATGCTTAATTTGTTTTCTTTTGAAATCTGCGATTATTTAACTTGTATTCTCTCTGCAGAATTAAGATTGTTTCCACATGCTAAAAGGCAGTTTCTTTAGACAAGGAAATTCTTGTTCTAATGGTTCAAGGGAGAAACTTTCTAGATATGTTAATTTTCAGTTAAATTAATTGTCATATTCATAGCCTTTTAAAGTAATAATTTCCAAGATCTTTGATGTCCAATCATCAATCAGTGATAGTTTAGCATTTAAACTTAACCATCCATTTCGAATCTTATATGCCCCATAGGTCATAGCTAATGATATGAAAACACAAAGTTTTCTAATTTTGGACTTTTTATCAGTTTCTGTCTTGCTAGAGAAGTTGGAGAGTAACAGTTTGGAAATTATTTTGCTAGTTATTGTTTTAGATGCTTTCCCCGTGGATTGAGAGAATTTTATTAGTTATTACAGTTTCTTATGTTTGCATTTATCAGAGTTTAAAATCAAGAGGTATTCGATTCCCTGGTCGGGACAATGAGAGTCTTGCACCCATTTTCACTCCTCCTCGCACAATTTCCGCTACGGAGACAGAAGCCAGTCATATCGAACAGTTTCATCACGATATTCCCGTGCAAACCTTTACAGCTGAAGAAACAAAGGAAGCATTTGACGTCGCAAGGAACAGCATTGAGCTTCTCTCAACAGTGTTATCCTCATCACCCGCTCAGGATACTTCAGAGGTAATGCATCTTTTCATAGTGTTCTGAGTTTTCTCTCTCTCACTTAATATGCATATGCTTTAAACGTTTCAATATATGATACAATTGGATGCTTGGAACTATTCATGGTCTGGCATCGAAAACTCGGTGAACTATCACAGCTGATCTGAAACACGAACATTTTCATGGTCATATCCTAATAATTGGATTTATTTAAGATGGTGCTCAATTTCCGTGAGATCCTACATCGATTGGGGAGGAGAACAAAACACCTCTTATAAGGGTGTGGAAACTTCTCCATAGTAAATGTTTTTAAAACCTTGAGGGAAAGCCCTAAAAGAAAAACCTAAAGAGGACAATATCTTCTAGCGAGGGCATGGGCCGTTACAACTGCCATTTGTATAACCAATATTTTACCAATTTCCCCCCTCCCTTTCTCCCTGAACTTTGAACCTTGCAACTCTTCAACTTTTATTGAGGCTCATGCTTATGAAGGGATTGGTTACTGTGTCTGAAAATTGAAGTTGGTCAGAACTATAATATTAGGCTCCTTCAAAATCTGAATTGGAACTCGACTATCCTGCAATGAGAATCATCGTGAAAGCGTCGTGTCCAATAATATTCACTTTCTGGGTTCCTTTTGATATTCATTACCGTGAGATTTAGGGAATGTTCGTTGTCTTTTGATTATCAGATTTGCGAGAAATTTTGTTAAATCGGACTTTGGAAGTAGAGATTATGTTTTGGTATATTAGTTTATTAGGACTTAGGACTCCTTATTTTTGCTTTGATGCTTAAGTTTCCTAAAAAGGAGTGGCTATGACCCATGGGATTCTCCTTATGTTGCTCGTGGAAGGTTTTATCGTAATCCATGATATCGAGACATCATAAAACCTGATTATTTTTCTCCTAAGTTGTTTCTTGCCCTATGCAGGATGATCTGACCGGGACACTCGTACTACAATGTCGCCAATCACGATCAGCCATCCAAAGAATTATCGAGACCGCTGAAGACAACGAGGCCCTTCTTTTCGAGGCATTGAATGTGAATGATGAAATTCAGAAAGTCCTTTCAAAGTGCGAAGATCTGAAGAAGCCCTCAACAACTTCTCCACGTGAACAAGAACCTGCCATGATACCCATTGCTGGGGAACCTGATGAATCTCCGAGTCACGCCAAGGAAGAAGATGCTCTGGTCAGAAAAGCTGCCACTTCCGGCAGCCGGCCTGGCGGCGGAAGCAGTGATGAAATGATGGATGATCTTGATGAGATGATATTTGGGAAGAAAGGTGGAAGTGCATCTGATCGGGGACAGGAACCCAAGAAGCCAGATTCATCAAAAGACAATGATCTCATTTCCTTTTGATTTTGAGCTTTTGGTTTGAACTGATTCATGATAATCACACTCTCAATTTTTAGAAAGATTTATTTGATGTTAAAAGATCTTTATGTAACTTTACATGTTTAGCTGCATTTTATTATAAACTTCTACACTAACTAATGCACATTTTCTATTATGAACTTCCAAGTGTTGAAAAGATTACTTTCATTTATTTGAATCATCACTCCCAACTGAACTTGAG

mRNA sequence

ATGAGTGACAATTTGATGGATAAAGTTAGTGCCTTGGGTGAACGCCTAAAGATTAGTGGGACAGAGATGAGCCGGAAGATGAGTGCAGGTGTCAGTTCTATGAGTTTCAAAATGAAGGAACTCTTTCAAGGTCCTAACCAGGACGATAAACTTGTTGAAGATGCCACATCAGAGACACTGGAAGAGCCGGATTGGGCCCTGAATCTTGAAATCTGTGACATGGTTAATTCTGAAAAAATCAACAGCATAGACTTGATTCGTGGGATTAAAAAACGAATAATGGTAAAAAGCCCCAGGATCCAGTATTTGGCATTGGTGCTGCTTGAGACGTGTGTTAAAAATTGTGAGAAGTGTTTCTCCGAGGTGGCAGCGGAGAGAGTTCTTGATGAGATGGTGAAGCTAATTGATGATCCGCAAACTGTTGTCAATAATCGGAACAAAGCTTTAATGTTGATTGAAGCATGGGGGGAATCAACTGGTGAACTTCGTTATTTGCCTGTTTATGAAGAAACGTACAAGAGTTTAAAATCAAGAGGTATTCGATTCCCTGGTCGGGACAATGAGAGTCTTGCACCCATTTTCACTCCTCCTCGCACAATTTCCGCTACGGAGACAGAAGCCAGTCATATCGAACAGTTTCATCACGATATTCCCGTGCAAACCTTTACAGCTGAAGAAACAAAGGAAGCATTTGACGTCGCAAGGAACAGCATTGAGCTTCTCTCAACAGTGTTATCCTCATCACCCGCTCAGGATACTTCAGAGGATGATCTGACCGGGACACTCGTACTACAATGTCGCCAATCACGATCAGCCATCCAAAGAATTATCGAGACCGCTGAAGACAACGAGGCCCTTCTTTTCGAGGCATTGAATGTGAATGATGAAATTCAGAAAGTCCTTTCAAAGTGCGAAGATCTGAAGAAGCCCTCAACAACTTCTCCACGTGAACAAGAACCTGCCATGATACCCATTGCTGGGGAACCTGATGAATCTCCGAGTCACGCCAAGGAAGAAGATGCTCTGGTCAGAAAAGCTGCCACTTCCGGCAGCCGGCCTGGCGGCGGAAGCAGTGATGAAATGATGGATGATCTTGATGAGATGATATTTGGGAAGAAAGGTGGAAGTGCATCTGATCGGGGACAGGAACCCAAGAAGCCAGATTCATCAAAAGACAATGATCTCATTTCCTTTTGATTTTGAGCTTTTGGTTTGAACTGATTCATGATAATCACACTCTCAATTTTTAGAAAGATTTATTTGATGTTAAAAGATCTTTATGTAACTTTACATGTTTAGCTGCATTTTATTATAAACTTCTACACTAACTAATGCACATTTTCTATTATGAACTTCCAAGTGTTGAAAAGATTACTTTCATTTATTTGAATCATCACTCCCAACTGAACTTGAG

Coding sequence (CDS)

ATGAGTGACAATTTGATGGATAAAGTTAGTGCCTTGGGTGAACGCCTAAAGATTAGTGGGACAGAGATGAGCCGGAAGATGAGTGCAGGTGTCAGTTCTATGAGTTTCAAAATGAAGGAACTCTTTCAAGGTCCTAACCAGGACGATAAACTTGTTGAAGATGCCACATCAGAGACACTGGAAGAGCCGGATTGGGCCCTGAATCTTGAAATCTGTGACATGGTTAATTCTGAAAAAATCAACAGCATAGACTTGATTCGTGGGATTAAAAAACGAATAATGGTAAAAAGCCCCAGGATCCAGTATTTGGCATTGGTGCTGCTTGAGACGTGTGTTAAAAATTGTGAGAAGTGTTTCTCCGAGGTGGCAGCGGAGAGAGTTCTTGATGAGATGGTGAAGCTAATTGATGATCCGCAAACTGTTGTCAATAATCGGAACAAAGCTTTAATGTTGATTGAAGCATGGGGGGAATCAACTGGTGAACTTCGTTATTTGCCTGTTTATGAAGAAACGTACAAGAGTTTAAAATCAAGAGGTATTCGATTCCCTGGTCGGGACAATGAGAGTCTTGCACCCATTTTCACTCCTCCTCGCACAATTTCCGCTACGGAGACAGAAGCCAGTCATATCGAACAGTTTCATCACGATATTCCCGTGCAAACCTTTACAGCTGAAGAAACAAAGGAAGCATTTGACGTCGCAAGGAACAGCATTGAGCTTCTCTCAACAGTGTTATCCTCATCACCCGCTCAGGATACTTCAGAGGATGATCTGACCGGGACACTCGTACTACAATGTCGCCAATCACGATCAGCCATCCAAAGAATTATCGAGACCGCTGAAGACAACGAGGCCCTTCTTTTCGAGGCATTGAATGTGAATGATGAAATTCAGAAAGTCCTTTCAAAGTGCGAAGATCTGAAGAAGCCCTCAACAACTTCTCCACGTGAACAAGAACCTGCCATGATACCCATTGCTGGGGAACCTGATGAATCTCCGAGTCACGCCAAGGAAGAAGATGCTCTGGTCAGAAAAGCTGCCACTTCCGGCAGCCGGCCTGGCGGCGGAAGCAGTGATGAAATGATGGATGATCTTGATGAGATGATATTTGGGAAGAAAGGTGGAAGTGCATCTGATCGGGGACAGGAACCCAAGAAGCCAGATTCATCAAAAGACAATGATCTCATTTCCTTTTGA

Protein sequence

MSDNLMDKVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETLEEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLKSRGIRFPGRDNESLAPIFTPPRTISATETEASHIEQFHHDIPVQTFTAEETKEAFDVARNSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAEDNEALLFEALNVNDEIQKVLSKCEDLKKPSTTSPREQEPAMIPIAGEPDESPSHAKEEDALVRKAATSGSRPGGGSSDEMMDDLDEMIFGKKGGSASDRGQEPKKPDSSKDNDLISF

Homology

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BLAST of CmaCh12G008560.1 vs. ExPASy Swiss-Prot
Match: Q9LFL3 (TOM1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOL1 PE=1 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.5e-153
Identity = 295/409 (72.13%), Postives = 338/409 (82.64%), Query Frame = 0


Query: 1   MSDNLMDKVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETL 60
           M DNLMDKV+A GERLKI G+E+S K+SAGVSSMSFK+KELFQGPN  DK+VEDAT+E L
Sbjct: 1   MGDNLMDKVTAFGERLKIGGSEVSNKISAGVSSMSFKVKELFQGPNPTDKIVEDATTENL 60

Query: 61  EEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFS 120
           EEPDW +NLEICDM+N E INS++LIRGIKKRIM+K PRIQYLALVLLETCVKNCEK FS
Sbjct: 61  EEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFS 120

Query: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLKSRGI 180
           EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST ELRYLPV+EETYKSLK+RGI
Sbjct: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSLKARGI 180

Query: 181 RFPGRDNESLAPIFTPPRTISATETEASHIEQFH------HDIPVQTFTAEETKEAFDVA 240
           RFPGRDNESLAPIFTP R+  A E  A   +  H      +D+PV++FTAE+TKEAFD+A
Sbjct: 181 RFPGRDNESLAPIFTPARSTPAPELNADLPQHVHEPAHIQYDVPVRSFTAEQTKEAFDIA 240

Query: 241 RNSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAEDNEALLFEALNVN 300
           RNSIELLSTVLSSSP  D  +DDLT TLV QCRQS++ +QRIIETA +NEALLFEALNVN
Sbjct: 241 RNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETAGENEALLFEALNVN 300

Query: 301 DEIQKVLSKCEDLKKPSTTSPREQEPAMIPIAGEPDESPSHAKEEDALVRKAA--TSGSR 360
           DE+ K LSK E++ KPS       EPAMIP+A EPD+SP H +EE +LVRK++    G  
Sbjct: 301 DELVKTLSKYEEMNKPSAPL-TSHEPAMIPVAEEPDDSPIHGREE-SLVRKSSGVRGGFH 360

Query: 361 PGGGSSDEMMDDLDEMIFGKKGG--SASDRGQEPKK-PDSSKDNDLISF 399
            GGGS D+MMDDLDEMIFGKK G  S+++   +PKK   SSK++DLI F
Sbjct: 361 GGGGSGDDMMDDLDEMIFGKKNGCDSSTNPDHDPKKEQSSSKNDDLIRF 407

[Close]

BLAST of CmaCh12G008560.1 vs. ExPASy Swiss-Prot
Match: Q9LNC6 (TOM1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=TOL2 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-56
Identity = 140/349 (40.11%), Postives = 210/349 (60.17%), Query Frame = 0


Query: 8   KVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETLEEPDWAL 67
           K++  GE+LK  G +MSR +S        K+K++ Q P  + K+V++AT ETLEEP+W +
Sbjct: 5   KIAEWGEKLKTGGAQMSRMVSE-------KVKDMLQAPTLESKMVDEATLETLEEPNWGM 64

Query: 68  NLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFSEVAAERV 127
           N+ IC  +N+++ N  +++R IK++I  KSP  Q L+L LLE C  NCEK FSEVA+E+V
Sbjct: 65  NMRICAQINNDEFNGTEIVRAIKRKISGKSPVSQRLSLELLEACAMNCEKVFSEVASEKV 124

Query: 128 LDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLK-SRGIRFPGRD 187
           LDEMV LI + +    NR +A  LI AWG+S  +L YLPV+ +TY SL+   G+   G +
Sbjct: 125 LDEMVWLIKNGEADSENRKRAFQLIRAWGQSQ-DLTYLPVFHQTYMSLEGENGLHARGEE 184

Query: 188 N--------ESL--API-FTPPRTISATETEASHIEQFHHDIPVQTFTAEETKEAFDVAR 247
           N        ESL   P+   PP +      E +  +    D      + ++ KE  ++ R
Sbjct: 185 NSMPGQSSLESLMQRPVPVPPPGSYPVPNQEQALGDDDGLDYNFGNLSIKDKKEQIEITR 244

Query: 248 NSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAEDNEALLFEALNVND 307
           NS+ELLS++L++    + +EDDLT +L+ +C+QS+  IQ IIE+  D+E +LFEAL++ND
Sbjct: 245 NSLELLSSMLNTEGKPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLND 304

Query: 308 EIQKVLSKCEDLKKPSTTSPR----EQEPAMIPIAGEPDESPSHAKEED 341
           E+Q+VLS     KKP  T  +    EQE      +G  D  P   ++E+
Sbjct: 305 ELQQVLS---SYKKPDETEKKASIVEQES-----SGSKDTGPKPTEQEE 337

[Close]

BLAST of CmaCh12G008560.1 vs. ExPASy Swiss-Prot
Match: Q8L860 (TOM1-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=TOL9 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.7e-30
Identity = 100/281 (35.59%), Postives = 153/281 (54.45%), Query Frame = 0


Query: 51  LVEDATSETLEEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLET 110
           +VE ATSE L  PDWA+NLEICDM+NS+   + D+++GIKKRI  ++P+ Q LAL LLET
Sbjct: 5   MVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLET 64

Query: 111 CVKNC-EKCFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTG--ELRYLPV 170
            VKNC +     VA + V+ EMV+++   +   + + K L+LI+ W E+ G    RY P 
Sbjct: 65  IVKNCGDMVHMHVAEKGVIHEMVRIV-KKKPDFHVKEKILVLIDTWQEAFGGPRARY-PQ 124

Query: 171 YEETYKSLKSRGIRFPGRDNESLAPIFTPPRTISATE--------TEASHIEQFHHDIPV 230
           Y   Y+ L   G  FP R   S AP+FTPP+T   T            + + +   +   
Sbjct: 125 YYAGYQELLRAGAVFPQRSERS-APVFTPPQTQPLTSYPPNLRNAGPGNDVPEPSAEPEF 184

Query: 231 QTFTAEETKEAFDVARNSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIET 290
            T +  E + A  +     E+LS  L     +D  ++ +   LV QCR  +  +  ++ +
Sbjct: 185 PTLSLSEIQNAKGIMDVLAEMLS-ALEPGNKEDLKQEVMV-DLVEQCRTYKQRVVHLVNS 244

Query: 291 AEDNEALLFEALNVNDEIQKVLSKCEDLKK--PSTTSPREQ 319
             D E+LL + L +ND++Q+VL+  E +    P T+S  E+
Sbjct: 245 TSD-ESLLCQGLALNDDLQRVLTNYEAIASGLPGTSSQIEK 279

[Close]

BLAST of CmaCh12G008560.1 vs. ExPASy Swiss-Prot
Match: Q6NQK0 (TOM1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOL4 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-29
Identity = 108/345 (31.30%), Postives = 175/345 (50.72%), Query Frame = 0


Query: 53  EDATSETLEEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCV 112
           E AT++ L  PDWA+N+E+CD++N +   + + ++ +KKR+  K+ ++Q LAL  LET  
Sbjct: 10  ERATNDMLIGPDWAINIELCDLINMDPSQAKEAVKVLKKRLGSKNSKVQILALYALETLS 69

Query: 113 KNC-EKCFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGEL--RYLPVYE 172
           KNC E  +  +    +L++MVK++   +  +N R K L L++ W E+ G    RY P Y 
Sbjct: 70  KNCGENVYQLIIDRGLLNDMVKIV-KKKPELNVREKILTLLDTWQEAFGGRGGRY-PQYY 129

Query: 173 ETYKSLKSRGIRFPGRDNESLAPIFTPPRTISATETEASHIEQFHHDIPVQTFTAEETKE 232
             Y  L+S GI FP R   SL+  FTPP+T      E + I+         + + EE + 
Sbjct: 130 NAYNDLRSAGIEFPPRTESSLS-FFTPPQT---QPDEDAAIQASLQGDDASSLSLEEIQS 189

Query: 233 AFDVARNSIELLSTVLSS-SPAQDTS-EDDLTGTLVLQCRQSRSAIQRIIETAEDNEALL 292
               A  S+++L  +L +  P    S ++++   LV QCR  +  +  ++ T  D E LL
Sbjct: 190 ----AEGSVDVLMDMLGAHDPGNPESLKEEVIVDLVEQCRTYQRRVMTLVNTTTDEE-LL 249

Query: 293 FEALNVNDEIQKVLSKCEDLKK----PST-TSPREQEPAMIPIAGEPDESPSHAKEEDAL 352
            + L +ND +Q VL + +D+      PS   + R   P  I      DE      E   L
Sbjct: 250 CQGLALNDNLQHVLQRHDDIANVGSVPSNGRNTRAPPPVQIVDINHDDEDDESDDEFARL 309

Query: 353 VRKAATSGSRPGGGSSDEMMDDLDEMIFGKKGGSASDRGQEPKKP 388
             +++T   RP  GS   M+D L   ++  +G S+S   ++P  P
Sbjct: 310 AHRSSTPTRRPVHGSDSGMVDILSGDVYKPQGNSSSQGVKKPPPP 343

[Close]

BLAST of CmaCh12G008560.1 vs. ExPASy Swiss-Prot
Match: F4KAU9 (TOM1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=TOL7 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-26
Identity = 98/325 (30.15%), Postives = 167/325 (51.38%), Query Frame = 0


Query: 52  VEDATSETLEEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETC 111
           V+ ATSE L  PDW + + ICD +NS +    D I+ +K+R+  KS R+Q L L LLE  
Sbjct: 26  VDKATSELLRTPDWTIIIAICDSLNSNRWQCKDAIKAVKRRLQHKSSRVQLLTLTLLEAM 85

Query: 112 VKNC-EKCFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGES-TGELRYLPVYE 171
           +KNC +   S +A + +L++MVKL+   +     RNK L+L++ W E+ +G     P Y 
Sbjct: 86  LKNCGDFVHSHIAEKHLLEDMVKLV-RKKGDFEVRNKLLILLDTWNEAFSGVACKHPHYN 145

Query: 172 ETYKSLKSRGIRFPGRDNESLAPIFTPP---RTISATETEASHIEQFHH-DIPVQTFTAE 231
             Y+ LK  G++FP R  E+   +  PP   ++ S++      I  F   D  + T    
Sbjct: 146 WAYQELKRCGVKFPQRSKEAPLMLEPPPPVTQSSSSSSMNLMSIGSFRRLDETMATEIES 205

Query: 232 ETKEAFDVARNSIELLSTVLSSSPAQDTS--EDDLTGTLVLQCRQSRSAIQRIIETAEDN 291
            +  + +  RN ++L++ ++ +    D S  +D+L   LV QCR ++  + +++ T  D 
Sbjct: 206 LSLSSLESMRNVMDLVNDMVQAVNPSDKSALKDELIVDLVEQCRSNQKKLIQMLTTTAD- 265

Query: 292 EALLFEALNVNDEIQKVLSKCEDLKKPSTTSPREQEPAMIPIAGEPDESPSHAKEEDALV 351
           E +L   L +ND +Q VL++ + +    +     Q P       EP E+ S  K   A  
Sbjct: 266 EDVLARGLELNDSLQVVLARHDAIASGVSLPLLLQAP-------EPRETSSSLKTCGAAA 325

Query: 352 RKAATSGSRPGGGSSDEMMDDLDEM 369
            ++A S S     SS+   D+++++
Sbjct: 326 LESADSESSSSSSSSESETDEVEDV 341

[Close]

BLAST of CmaCh12G008560.1 vs. TAIR 10
Match: AT5G16880.1 (Target of Myb protein 1 )

HSP 1 Score: 543.9 bits (1400), Expect = 1.1e-154
Identity = 295/409 (72.13%), Postives = 338/409 (82.64%), Query Frame = 0


Query: 1   MSDNLMDKVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETL 60
           M DNLMDKV+A GERLKI G+E+S K+SAGVSSMSFK+KELFQGPN  DK+VEDAT+E L
Sbjct: 1   MGDNLMDKVTAFGERLKIGGSEVSNKISAGVSSMSFKVKELFQGPNPTDKIVEDATTENL 60

Query: 61  EEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFS 120
           EEPDW +NLEICDM+N E INS++LIRGIKKRIM+K PRIQYLALVLLETCVKNCEK FS
Sbjct: 61  EEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFS 120

Query: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLKSRGI 180
           EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST ELRYLPV+EETYKSLK+RGI
Sbjct: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSLKARGI 180

Query: 181 RFPGRDNESLAPIFTPPRTISATETEASHIEQFH------HDIPVQTFTAEETKEAFDVA 240
           RFPGRDNESLAPIFTP R+  A E  A   +  H      +D+PV++FTAE+TKEAFD+A
Sbjct: 181 RFPGRDNESLAPIFTPARSTPAPELNADLPQHVHEPAHIQYDVPVRSFTAEQTKEAFDIA 240

Query: 241 RNSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAEDNEALLFEALNVN 300
           RNSIELLSTVLSSSP  D  +DDLT TLV QCRQS++ +QRIIETA +NEALLFEALNVN
Sbjct: 241 RNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETAGENEALLFEALNVN 300

Query: 301 DEIQKVLSKCEDLKKPSTTSPREQEPAMIPIAGEPDESPSHAKEEDALVRKAA--TSGSR 360
           DE+ K LSK E++ KPS       EPAMIP+A EPD+SP H +EE +LVRK++    G  
Sbjct: 301 DELVKTLSKYEEMNKPSAPL-TSHEPAMIPVAEEPDDSPIHGREE-SLVRKSSGVRGGFH 360

Query: 361 PGGGSSDEMMDDLDEMIFGKKGG--SASDRGQEPKK-PDSSKDNDLISF 399
            GGGS D+MMDDLDEMIFGKK G  S+++   +PKK   SSK++DLI F
Sbjct: 361 GGGGSGDDMMDDLDEMIFGKKNGCDSSTNPDHDPKKEQSSSKNDDLIRF 407

[Close]

BLAST of CmaCh12G008560.1 vs. TAIR 10
Match: AT5G16880.2 (Target of Myb protein 1 )

HSP 1 Score: 543.9 bits (1400), Expect = 1.1e-154
Identity = 295/409 (72.13%), Postives = 338/409 (82.64%), Query Frame = 0


Query: 1   MSDNLMDKVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETL 60
           M DNLMDKV+A GERLKI G+E+S K+SAGVSSMSFK+KELFQGPN  DK+VEDAT+E L
Sbjct: 1   MGDNLMDKVTAFGERLKIGGSEVSNKISAGVSSMSFKVKELFQGPNPTDKIVEDATTENL 60

Query: 61  EEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFS 120
           EEPDW +NLEICDM+N E INS++LIRGIKKRIM+K PRIQYLALVLLETCVKNCEK FS
Sbjct: 61  EEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFS 120

Query: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLKSRGI 180
           EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST ELRYLPV+EETYKSLK+RGI
Sbjct: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSLKARGI 180

Query: 181 RFPGRDNESLAPIFTPPRTISATETEASHIEQFH------HDIPVQTFTAEETKEAFDVA 240
           RFPGRDNESLAPIFTP R+  A E  A   +  H      +D+PV++FTAE+TKEAFD+A
Sbjct: 181 RFPGRDNESLAPIFTPARSTPAPELNADLPQHVHEPAHIQYDVPVRSFTAEQTKEAFDIA 240

Query: 241 RNSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAEDNEALLFEALNVN 300
           RNSIELLSTVLSSSP  D  +DDLT TLV QCRQS++ +QRIIETA +NEALLFEALNVN
Sbjct: 241 RNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETAGENEALLFEALNVN 300

Query: 301 DEIQKVLSKCEDLKKPSTTSPREQEPAMIPIAGEPDESPSHAKEEDALVRKAA--TSGSR 360
           DE+ K LSK E++ KPS       EPAMIP+A EPD+SP H +EE +LVRK++    G  
Sbjct: 301 DELVKTLSKYEEMNKPSAPL-TSHEPAMIPVAEEPDDSPIHGREE-SLVRKSSGVRGGFH 360

Query: 361 PGGGSSDEMMDDLDEMIFGKKGG--SASDRGQEPKK-PDSSKDNDLISF 399
            GGGS D+MMDDLDEMIFGKK G  S+++   +PKK   SSK++DLI F
Sbjct: 361 GGGGSGDDMMDDLDEMIFGKKNGCDSSTNPDHDPKKEQSSSKNDDLIRF 407

[Close]

BLAST of CmaCh12G008560.1 vs. TAIR 10
Match: AT5G16880.3 (Target of Myb protein 1 )

HSP 1 Score: 434.5 bits (1116), Expect = 9.2e-122
Identity = 223/288 (77.43%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 1   MSDNLMDKVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETL 60
           M DNLMDKV+A GERLKI G+E+S K+SAGVSSMSFK+KELFQGPN  DK+VEDAT+E L
Sbjct: 1   MGDNLMDKVTAFGERLKIGGSEVSNKISAGVSSMSFKVKELFQGPNPTDKIVEDATTENL 60

Query: 61  EEPDWALNLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFS 120
           EEPDW +NLEICDM+N E INS++LIRGIKKRIM+K PRIQYLALVLLETCVKNCEK FS
Sbjct: 61  EEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFS 120

Query: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLKSRGI 180
           EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST ELRYLPV+EETYKSLK+RGI
Sbjct: 121 EVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSLKARGI 180

Query: 181 RFPGRDNESLAPIFTPPRTISATETEASHIEQFH------HDIPVQTFTAEETKEAFDVA 240
           RFPGRDNESLAPIFTP R+  A E  A   +  H      +D+PV++FTAE+TKEAFD+A
Sbjct: 181 RFPGRDNESLAPIFTPARSTPAPELNADLPQHVHEPAHIQYDVPVRSFTAEQTKEAFDIA 240

Query: 241 RNSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAED 283
           RNSIELLSTVLSSSP  D  +DDLT TLV QCRQS++ +QRIIETA++
Sbjct: 241 RNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETADE 288

[Close]

BLAST of CmaCh12G008560.1 vs. TAIR 10
Match: AT1G06210.1 (ENTH/VHS/GAT family protein )

HSP 1 Score: 222.2 bits (565), Expect = 7.2e-58
Identity = 140/349 (40.11%), Postives = 210/349 (60.17%), Query Frame = 0


Query: 8   KVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETLEEPDWAL 67
           K++  GE+LK  G +MSR +S        K+K++ Q P  + K+V++AT ETLEEP+W +
Sbjct: 5   KIAEWGEKLKTGGAQMSRMVSE-------KVKDMLQAPTLESKMVDEATLETLEEPNWGM 64

Query: 68  NLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFSEVAAERV 127
           N+ IC  +N+++ N  +++R IK++I  KSP  Q L+L LLE C  NCEK FSEVA+E+V
Sbjct: 65  NMRICAQINNDEFNGTEIVRAIKRKISGKSPVSQRLSLELLEACAMNCEKVFSEVASEKV 124

Query: 128 LDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLK-SRGIRFPGRD 187
           LDEMV LI + +    NR +A  LI AWG+S  +L YLPV+ +TY SL+   G+   G +
Sbjct: 125 LDEMVWLIKNGEADSENRKRAFQLIRAWGQSQ-DLTYLPVFHQTYMSLEGENGLHARGEE 184

Query: 188 N--------ESL--API-FTPPRTISATETEASHIEQFHHDIPVQTFTAEETKEAFDVAR 247
           N        ESL   P+   PP +      E +  +    D      + ++ KE  ++ R
Sbjct: 185 NSMPGQSSLESLMQRPVPVPPPGSYPVPNQEQALGDDDGLDYNFGNLSIKDKKEQIEITR 244

Query: 248 NSIELLSTVLSSSPAQDTSEDDLTGTLVLQCRQSRSAIQRIIETAEDNEALLFEALNVND 307
           NS+ELLS++L++    + +EDDLT +L+ +C+QS+  IQ IIE+  D+E +LFEAL++ND
Sbjct: 245 NSLELLSSMLNTEGKPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLND 304

Query: 308 EIQKVLSKCEDLKKPSTTSPR----EQEPAMIPIAGEPDESPSHAKEED 341
           E+Q+VLS     KKP  T  +    EQE      +G  D  P   ++E+
Sbjct: 305 ELQQVLS---SYKKPDETEKKASIVEQES-----SGSKDTGPKPTEQEE 337

[Close]

BLAST of CmaCh12G008560.1 vs. TAIR 10
Match: AT1G06210.2 (ENTH/VHS/GAT family protein )

HSP 1 Score: 169.5 bits (428), Expect = 5.5e-42
Identity = 102/260 (39.23%), Postives = 155/260 (59.62%), Query Frame = 0


Query: 8   KVSALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQDDKLVEDATSETLEEPDWAL 67
           K++  GE+LK  G +MSR +S        K+K++ Q P  + K+V++AT ETLEEP+W +
Sbjct: 5   KIAEWGEKLKTGGAQMSRMVSE-------KVKDMLQAPTLESKMVDEATLETLEEPNWGM 64

Query: 68  NLEICDMVNSEKINSIDLIRGIKKRIMVKSPRIQYLALVLLETCVKNCEKCFSEVAAERV 127
           N+ IC  +N+++ N  +++R IK++I  KSP  Q L+L LLE C  NCEK FSEVA+E+V
Sbjct: 65  NMRICAQINNDEFNGTEIVRAIKRKISGKSPVSQRLSLELLEACAMNCEKVFSEVASEKV 124

Query: 128 LDEMVKLIDDPQTVVNNRNKALMLIEAWGESTGELRYLPVYEETYKSLK-SRGIRFPGRD 187
           LDEMV LI + +    NR +A  LI AWG+S  +L YLPV+ +TY SL+   G+   G +
Sbjct: 125 LDEMVWLIKNGEADSENRKRAFQLIRAWGQSQ-DLTYLPVFHQTYMSLEGENGLHARGEE 184

Query: 188 N--------ESL--API-FTPPRTISATETEASHIEQFHHDIPVQTFTAEETKEAFDVAR 247
           N        ESL   P+   PP +      E +  +    D      + ++ KE  ++ R
Sbjct: 185 NSMPGQSSLESLMQRPVPVPPPGSYPVPNQEQALGDDDGLDYNFGNLSIKDKKEQIEITR 244

Query: 248 NSIELLSTVLSSSPAQDTSE 256
           NS+ELLS++L++    + +E
Sbjct: 245 NSLELLSSMLNTEGKPNHTE 256

The following BLAST results are available for this feature:

BLAST of CmaCh12G008560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFL3	1.5e-153	72.13	TOM1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOL1 PE=1 SV=1	[more]
Q9LNC6	1.0e-56	40.11	TOM1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=TOL2 PE=1 SV=1	[more]
Q8L860	4.7e-30	35.59	TOM1-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=TOL9 PE=1 SV=1	[more]
Q6NQK0	1.4e-29	31.30	TOM1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOL4 PE=1 SV=1	[more]
F4KAU9	1.1e-26	30.15	TOM1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=TOL7 PE=2 SV=1	[more]

BLAST of CmaCh12G008560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16880.1	1.1e-154	72.13	Target of Myb protein 1	[more]
AT5G16880.2	1.1e-154	72.13	Target of Myb protein 1	[more]
AT5G16880.3	9.2e-122	77.43	Target of Myb protein 1	[more]
AT1G06210.1	7.2e-58	40.11	ENTH/VHS/GAT family protein	[more]
AT1G06210.2	5.5e-42	39.23	ENTH/VHS/GAT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002014	VHS domain	SMART	SM00288	VHS_2	coord: 48..179 e-value: 1.1E-28 score: 111.3
IPR002014	VHS domain	PFAM	PF00790	VHS	coord: 49..179 e-value: 1.0E-25 score: 90.3
IPR002014	VHS domain	PROSITE	PS50179	VHS	coord: 55..183 score: 38.674606
IPR004152	GAT domain	PFAM	PF03127	GAT	coord: 235..309 e-value: 9.0E-16 score: 57.9
IPR004152	GAT domain	PROSITE	PS50909	GAT	coord: 222..309 score: 14.207528
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 43..200 e-value: 7.9E-43 score: 147.8
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 43..183
IPR038425	GAT domain superfamily	GENE3D	1.20.58.160		coord: 218..310 e-value: 6.5E-15 score: 57.2
IPR014645	Target of Myb protein 1	PIRSF	PIRSF036948	TOM1	coord: 32..396 e-value: 1.3E-110 score: 368.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 378..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..398
None	No IPR available	PANTHER	PTHR46646:SF1	TOM1-LIKE PROTEIN 1	coord: 1..398
None	No IPR available	CDD	cd03561	VHS	coord: 49..177 e-value: 1.03108E-57 score: 182.849
None	No IPR available	SUPERFAMILY	89009	GAT-like domain	coord: 180..310
IPR044836	TOM1-like protein, plant	PANTHER	PTHR46646	TOM1-LIKE PROTEIN 1	coord: 1..398

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G008560	CmaCh12G008560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G008560.1:exon:147	CmaCh12G008560.1:exon:147	exon
CmaCh12G008560.1:exon:146	CmaCh12G008560.1:exon:146	exon
CmaCh12G008560.1:exon:145	CmaCh12G008560.1:exon:145	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G008560.1:three_prime_utr	CmaCh12G008560.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G008560.1:cds	CmaCh12G008560.1:cds_3	CDS
CmaCh12G008560.1:cds	CmaCh12G008560.1:cds_2	CDS
CmaCh12G008560.1:cds	CmaCh12G008560.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G008560.1	CmaCh12G008560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043328	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component	GO:0016020	membrane
molecular_function	GO:0035091	phosphatidylinositol binding
molecular_function	GO:0043130	ubiquitin binding